RNA–Protein interactions for RNA: ENST00000529058.1

TRIM3-208, Transcript of tripartite motif containing 3, humanhuman

TSL 3

Gene TRIM3, Length 723 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-208ENST00000529058 NBPF14Q5TI25 921 aa21.22■□□□□ 0.99
TRIM3-208ENST00000529058 SPON1Q9HCB6 807 aa21.22■□□□□ 0.99
TRIM3-208ENST00000529058 PIK3C2GO75747 1445 aa21.21■□□□□ 0.99
TRIM3-208ENST00000529058 PMFBP1Q8TBY8 1022 aa21.21■□□□□ 0.99
TRIM3-208ENST00000529058 CRYBG1Q9Y4K1 1723 aa21.21■□□□□ 0.99
TRIM3-208ENST00000529058 RGL3Q3MIN7 710 aa21.2■□□□□ 0.98
TRIM3-208ENST00000529058 SLC4A1APQ9BWU0 796 aaKnown RBP21.2■□□□□ 0.98
TRIM3-208ENST00000529058 CAMTA1Q9Y6Y1 1673 aa21.19■□□□□ 0.98
TRIM3-208ENST00000529058 KCNQ2O43526 872 aa21.18■□□□□ 0.98
TRIM3-208ENST00000529058 SPATA31A1Q5TZJ5 1347 aa21.18■□□□□ 0.98
TRIM3-208ENST00000529058 ANKARQ7Z5J8 1434 aa21.18■□□□□ 0.98
TRIM3-208ENST00000529058 SPATA31E1Q6ZUB1 1445 aa21.17■□□□□ 0.98
TRIM3-208ENST00000529058 PRDM11Q9NQV5 511 aa21.16■□□□□ 0.98
TRIM3-208ENST00000529058 GPRASP1Q5JY77 1395 aa21.15■□□□□ 0.98
TRIM3-208ENST00000529058 SAFB2Q14151 953 aaKnown RBP eCLIP21.14■□□□□ 0.97
TRIM3-208ENST00000529058 ZNF784Q8NCA9 323 aaPredicted RBP21.12■□□□□ 0.97
TRIM3-208ENST00000529058 PRAM1Q96QH2 718 aa21.12■□□□□ 0.97
TRIM3-208ENST00000529058 DHX57Q6P158 1386 aaKnown RBP21.11■□□□□ 0.97
TRIM3-208ENST00000529058 PDE3BQ13370 1112 aa21.11■□□□□ 0.97
TRIM3-208ENST00000529058 ACIN1Q9UKV3 1341 aaKnown RBP21.1■□□□□ 0.97
TRIM3-208ENST00000529058 C14orf93Q9H972 538 aaKnown RBP21.1■□□□□ 0.97
TRIM3-208ENST00000529058 STRN4Q9NRL3 753 aa21.1■□□□□ 0.97
TRIM3-208ENST00000529058 SENP3-EIF4A1A0A087X0R7 540 aa21.09■□□□□ 0.97
TRIM3-208ENST00000529058 UTRNP46939 3433 aa21.09■□□□□ 0.97
TRIM3-208ENST00000529058 KIAA0232Q92628 1395 aa21.09■□□□□ 0.97
TRIM3-208ENST00000529058 IFFO2Q5TF58 517 aa21.08■□□□□ 0.97
TRIM3-208ENST00000529058 USP35Q9P2H5 1018 aa21.08■□□□□ 0.97
TRIM3-208ENST00000529058 CHRNA2Q15822 529 aa21.07■□□□□ 0.96
TRIM3-208ENST00000529058 BARGINQ6ZT62 677 aa21.07■□□□□ 0.96
TRIM3-208ENST00000529058 POGKQ9P215 609 aa21.07■□□□□ 0.96
TRIM3-208ENST00000529058 PHRF1Q9P1Y6 1649 aaKnown RBP21.07■□□□□ 0.96
TRIM3-208ENST00000529058 DLC1Q96QB1 1528 aa21.06■□□□□ 0.96
TRIM3-208ENST00000529058 PAK3O75914 559 aaPredicted RBP21.06■□□□□ 0.96
TRIM3-208ENST00000529058 CHD4Q14839 1912 aa21.06■□□□□ 0.96
TRIM3-208ENST00000529058 NRKQ7Z2Y5 1582 aa21.06■□□□□ 0.96
TRIM3-208ENST00000529058 CASZ1Q86V15 1759 aa21.05■□□□□ 0.96
TRIM3-208ENST00000529058 CFAP70Q5T0N1 1121 aa21.05■□□□□ 0.96
TRIM3-208ENST00000529058 PPARGC1BQ86YN6 1023 aaKnown RBP21.05■□□□□ 0.96
TRIM3-208ENST00000529058 RGPD3A6NKT7 1758 aaPredicted RBP21.05■□□□□ 0.96
TRIM3-208ENST00000529058 RGPD4Q7Z3J3 1758 aa21.05■□□□□ 0.96
TRIM3-208ENST00000529058 EIF3AQ14152 1382 aaKnown RBP21.04■□□□□ 0.96
TRIM3-208ENST00000529058 TULP4Q9NRJ4 1543 aa21.04■□□□□ 0.96
TRIM3-208ENST00000529058 PRR36Q9H6K5 1346 aa21.04■□□□□ 0.96
TRIM3-208ENST00000529058 NGDNQ8NEJ9 315 aaKnown RBP21.03■□□□□ 0.96
TRIM3-208ENST00000529058 SSH2Q76I76 1423 aa21.03■□□□□ 0.96
TRIM3-208ENST00000529058 HIRIP3Q9BW71 556 aaPredicted RBP21.02■□□□□ 0.96
TRIM3-208ENST00000529058 EVA1CP58658 441 aa21.01■□□□□ 0.95
TRIM3-208ENST00000529058 C1QTNF8P60827 252 aa21.01■□□□□ 0.95
TRIM3-208ENST00000529058 ZC3H6P61129 1189 aaKnown RBP21.01■□□□□ 0.95
TRIM3-208ENST00000529058 MYOM1P52179 1685 aa21.01■□□□□ 0.95
TRIM3-208ENST00000529058 PARP4Q9UKK3 1724 aaKnown RBP21■□□□□ 0.95
TRIM3-208ENST00000529058 TCP11L2Q8N4U5 519 aa20.99■□□□□ 0.95
TRIM3-208ENST00000529058 SBF2Q86WG5 1849 aa20.99■□□□□ 0.95
TRIM3-208ENST00000529058 C11orf95C9JLR9 678 aaPredicted RBP20.98■□□□□ 0.95
TRIM3-208ENST00000529058 ITSN1Q15811 1721 aa20.98■□□□□ 0.95
TRIM3-208ENST00000529058 LARP1Q6PKG0 1096 aaKnown RBP20.97■□□□□ 0.95
TRIM3-208ENST00000529058 ANO8Q9HCE9 1232 aaPredicted RBP20.97■□□□□ 0.95
TRIM3-208ENST00000529058 MINK1Q8N4C8 1332 aaPredicted RBP20.97■□□□□ 0.95
TRIM3-208ENST00000529058 ATP7BP35670 1465 aa20.96■□□□□ 0.95
TRIM3-208ENST00000529058 PLSCR1O15162 318 aa20.96■□□□□ 0.95
TRIM3-208ENST00000529058 THRAP3Q9Y2W1 955 aaKnown RBP20.96■□□□□ 0.95
TRIM3-208ENST00000529058 PEAK1Q9H792 1746 aa20.95■□□□□ 0.94
TRIM3-208ENST00000529058 WASLO00401 505 aaPredicted RBP20.95■□□□□ 0.94
TRIM3-208ENST00000529058 LMO7Q8WWI1 1683 aa20.95■□□□□ 0.94
TRIM3-208ENST00000529058 ZBTB7AO95365 584 aa20.94■□□□□ 0.94
TRIM3-208ENST00000529058 PTGER2P43116 358 aa20.94■□□□□ 0.94
TRIM3-208ENST00000529058 PDGFDQ9GZP0 370 aaPredicted RBP20.94■□□□□ 0.94
TRIM3-208ENST00000529058 OVOS2A0A0G2JMS6 1433 aa20.94■□□□□ 0.94
TRIM3-208ENST00000529058 OVOS2A0A0J9YW53 1432 aa20.94■□□□□ 0.94
TRIM3-208ENST00000529058 OVOS2Q6IE36 1432 aa20.94■□□□□ 0.94
TRIM3-208ENST00000529058 NUTM2GQ5VZR2 741 aa20.93■□□□□ 0.94
TRIM3-208ENST00000529058 TRAK1Q9UPV9 953 aa20.93■□□□□ 0.94
TRIM3-208ENST00000529058 ADGRB1O14514 1584 aa20.93■□□□□ 0.94
TRIM3-208ENST00000529058 SYT17Q9BSW7 474 aa20.92■□□□□ 0.94
TRIM3-208ENST00000529058 MPHOSPH9Q99550 1183 aa20.91■□□□□ 0.94
TRIM3-208ENST00000529058 FHDC1Q9C0D6 1143 aaPredicted RBP20.91■□□□□ 0.94
TRIM3-208ENST00000529058 ATF5Q9Y2D1 282 aaPredicted RBP20.91■□□□□ 0.94
TRIM3-208ENST00000529058 BCL11BQ9C0K0 894 aaPredicted RBP20.9■□□□□ 0.94
TRIM3-208ENST00000529058 CPDO75976 1380 aa20.89■□□□□ 0.93
TRIM3-208ENST00000529058 LRRC37A3O60309 1634 aa20.87■□□□□ 0.93
TRIM3-208ENST00000529058 PROM2Q8N271 834 aa20.86■□□□□ 0.93
TRIM3-208ENST00000529058 NUDT16Q96DE0 195 aaKnown RBP20.86■□□□□ 0.93
TRIM3-208ENST00000529058 COL5A2P05997 1499 aaPredicted RBP20.86■□□□□ 0.93
TRIM3-208ENST00000529058 CRB1P82279 1406 aa20.85■□□□□ 0.93
TRIM3-208ENST00000529058 PTF1AQ7RTS3 328 aa20.84■□□□□ 0.93
TRIM3-208ENST00000529058 STK32BQ9NY57 414 aa20.84■□□□□ 0.93
TRIM3-208ENST00000529058 DDB1Q16531 1140 aa20.83■□□□□ 0.93
TRIM3-208ENST00000529058 CEP350Q5VT06 3117 aa20.83■□□□□ 0.92
TRIM3-208ENST00000529058 POLR3AO14802 1390 aaPredicted RBP20.83■□□□□ 0.92
TRIM3-208ENST00000529058 ABTB2Q8N961 1025 aa20.82■□□□□ 0.92
TRIM3-208ENST00000529058 SGIP1Q9BQI5 828 aa20.82■□□□□ 0.92
TRIM3-208ENST00000529058 MTFR1LQ9H019 292 aa20.82■□□□□ 0.92
TRIM3-208ENST00000529058 TOPAZ1Q8N9V7 1692 aa20.82■□□□□ 0.92
TRIM3-208ENST00000529058 AKAP12Q02952 1782 aa20.82■□□□□ 0.92
TRIM3-208ENST00000529058 USP19O94966 1318 aa20.81■□□□□ 0.92
TRIM3-208ENST00000529058 GIGYF1O75420 1035 aaPredicted RBP20.81■□□□□ 0.92
TRIM3-208ENST00000529058 SLC15A2Q16348 729 aa20.81■□□□□ 0.92
TRIM3-208ENST00000529058 WNK3Q9BYP7 1800 aa20.81■□□□□ 0.92
TRIM3-208ENST00000529058 ACEP12821 1306 aa20.8■□□□□ 0.92
TRIM3-208ENST00000529058 ARHGEF28Q8N1W1 1705 aaKnown RBP20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms