RNA–Protein interactions for RNA: ENST00000524094.1

LINC01339-204, Transcript of long intergenic non-protein coding RNA 1339, humanhuman

TSL 3

Gene LINC01339, Length 269 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01339-204ENST00000524094 METTL3Q86U44 580 aaKnown RBP5.46□□□□□ -1.54
LINC01339-204ENST00000524094 PXYLP1Q8TE99 480 aa5.46□□□□□ -1.54
LINC01339-204ENST00000524094 DDRGK1Q96HY6 314 aa5.46□□□□□ -1.54
LINC01339-204ENST00000524094 C1orf115Q9H7X2 142 aa5.46□□□□□ -1.54
LINC01339-204ENST00000524094 ACTN4O43707 911 aaKnown RBP5.45□□□□□ -1.54
LINC01339-204ENST00000524094 SSTR3P32745 418 aaPredicted RBP5.45□□□□□ -1.54
LINC01339-204ENST00000524094 PADI6Q6TGC4 694 aa5.45□□□□□ -1.54
LINC01339-204ENST00000524094 PROCA1Q8NCQ7 364 aaPredicted RBP5.45□□□□□ -1.54
LINC01339-204ENST00000524094 WHAMMQ8TF30 809 aa5.45□□□□□ -1.54
LINC01339-204ENST00000524094 FAM217BQ9NTX9 383 aaPredicted RBP5.45□□□□□ -1.54
LINC01339-204ENST00000524094 CAPN5O15484 640 aaPredicted RBP5.44□□□□□ -1.54
LINC01339-204ENST00000524094 ZBTB24O43167 697 aaPredicted RBP5.44□□□□□ -1.54
LINC01339-204ENST00000524094 MDM2Q00987 491 aaPredicted RBP5.44□□□□□ -1.54
LINC01339-204ENST00000524094 EYA1Q99502 592 aa5.44□□□□□ -1.54
LINC01339-204ENST00000524094 SOBPA7XYQ1 873 aa5.43□□□□□ -1.54
LINC01339-204ENST00000524094 ARXQ96QS3 562 aa5.43□□□□□ -1.54
LINC01339-204ENST00000524094 TTLL12Q14166 644 aaPredicted RBP5.42□□□□□ -1.54
LINC01339-204ENST00000524094 CERKQ8TCT0 537 aa5.42□□□□□ -1.54
LINC01339-204ENST00000524094 SPSB2Q99619 263 aa5.42□□□□□ -1.54
LINC01339-204ENST00000524094 GPCPD1Q9NPB8 672 aa5.42□□□□□ -1.54
LINC01339-204ENST00000524094 DAXXQ9UER7 740 aaPredicted RBP5.42□□□□□ -1.54
LINC01339-204ENST00000524094 PPFIA3O75145 1194 aa5.41□□□□□ -1.54
LINC01339-204ENST00000524094 LAMC2Q13753 1193 aa5.41□□□□□ -1.54
LINC01339-204ENST00000524094 KMT5BQ4FZB7 885 aa5.41□□□□□ -1.54
LINC01339-204ENST00000524094 SH3D19Q5HYK7 790 aa5.41□□□□□ -1.54
LINC01339-204ENST00000524094 GPR161Q8N6U8 529 aaKnown RBP5.41□□□□□ -1.54
LINC01339-204ENST00000524094 GNL3Q9BVP2 549 aaKnown RBP eCLIP5.41□□□□□ -1.54
LINC01339-204ENST00000524094 RBM27Q9P2N5 1060 aaKnown RBP5.41□□□□□ -1.54
LINC01339-204ENST00000524094 OATP04181 439 aa5.4□□□□□ -1.54
LINC01339-204ENST00000524094 CLCN1P35523 988 aa5.4□□□□□ -1.54
LINC01339-204ENST00000524094 SKIV2LQ15477 1246 aaKnown RBP5.4□□□□□ -1.54
LINC01339-204ENST00000524094 ARID1BQ8NFD5 2236 aaPredicted RBP5.39□□□□□ -1.55
LINC01339-204ENST00000524094 MYSM1Q5VVJ2 828 aa5.39□□□□□ -1.55
LINC01339-204ENST00000524094 SCUBE3Q8IX30 993 aa5.39□□□□□ -1.55
LINC01339-204ENST00000524094 BEGAINQ9BUH8 593 aa5.39□□□□□ -1.55
LINC01339-204ENST00000524094 ZMYM1Q5SVZ6 1142 aa5.38□□□□□ -1.55
LINC01339-204ENST00000524094 COL25A1Q9BXS0 654 aaPredicted RBP5.38□□□□□ -1.55
LINC01339-204ENST00000524094 KRTAP4-5Q9BYR2 181 aa5.38□□□□□ -1.55
LINC01339-204ENST00000524094 RCCD1A6NED2 376 aa5.37□□□□□ -1.55
LINC01339-204ENST00000524094 KRTAP9-8Q9BYQ0 159 aa5.37□□□□□ -1.55
LINC01339-204ENST00000524094 KRTAP4-11Q9BYQ6 195 aa5.37□□□□□ -1.55
LINC01339-204ENST00000524094 PHF20L1A8MW92 1017 aa5.36□□□□□ -1.55
LINC01339-204ENST00000524094 ALDH1A1P00352 501 aa5.36□□□□□ -1.55
LINC01339-204ENST00000524094 FNBP4Q8N3X1 1017 aaPredicted RBP5.36□□□□□ -1.55
LINC01339-204ENST00000524094 RSPH6AQ9H0K4 717 aa5.36□□□□□ -1.55
LINC01339-204ENST00000524094 POLR3EQ9NVU0 708 aa5.36□□□□□ -1.55
LINC01339-204ENST00000524094 LIMD1Q9UGP4 676 aa5.36□□□□□ -1.55
LINC01339-204ENST00000524094 A6NJR5 290 aa5.35□□□□□ -1.55
LINC01339-204ENST00000524094 CD46P15529 392 aa5.35□□□□□ -1.55
LINC01339-204ENST00000524094 UBTFP17480 764 aaKnown RBP5.35□□□□□ -1.55
LINC01339-204ENST00000524094 TRIM32Q13049 653 aa5.35□□□□□ -1.55
LINC01339-204ENST00000524094 MCM6Q14566 821 aa5.35□□□□□ -1.55
LINC01339-204ENST00000524094 SPIRE2Q8WWL2 714 aa5.35□□□□□ -1.55
LINC01339-204ENST00000524094 CLUAP1Q96AJ1 413 aa5.35□□□□□ -1.55
LINC01339-204ENST00000524094 TBC1D2Q9BYX2 928 aa5.35□□□□□ -1.55
LINC01339-204ENST00000524094 PPP2R2DQ66LE6 453 aa5.34□□□□□ -1.55
LINC01339-204ENST00000524094 POM121Q96HA1 1249 aa5.34□□□□□ -1.55
LINC01339-204ENST00000524094 PCMTD1Q96MG8 357 aaPredicted RBP5.34□□□□□ -1.55
LINC01339-204ENST00000524094 CNTNAP5Q8WYK1 1306 aa5.33□□□□□ -1.56
LINC01339-204ENST00000524094 CFHP08603 1231 aa5.33□□□□□ -1.56
LINC01339-204ENST00000524094 ITGB7P26010 798 aa5.33□□□□□ -1.56
LINC01339-204ENST00000524094 FLIIQ13045 1269 aa5.33□□□□□ -1.56
LINC01339-204ENST00000524094 RNFT1Q5M7Z0 435 aa5.33□□□□□ -1.56
LINC01339-204ENST00000524094 SNRKQ9NRH2 765 aa5.33□□□□□ -1.56
LINC01339-204ENST00000524094 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP5.32□□□□□ -1.56
LINC01339-204ENST00000524094 SCO2A0A1W2PP80 73 aa5.32□□□□□ -1.56
LINC01339-204ENST00000524094 ARID3CA6NKF2 412 aa5.32□□□□□ -1.56
LINC01339-204ENST00000524094 SPTLC1O15269 473 aa5.32□□□□□ -1.56
LINC01339-204ENST00000524094 TRAK2O60296 914 aa5.32□□□□□ -1.56
LINC01339-204ENST00000524094 SCARF1Q14162 830 aa5.32□□□□□ -1.56
LINC01339-204ENST00000524094 RBM46Q8TBY0 533 aaKnown RBP5.32□□□□□ -1.56
LINC01339-204ENST00000524094 PURBQ96QR8 312 aaKnown RBP5.32□□□□□ -1.56
LINC01339-204ENST00000524094 TMEM134Q9H6X4 195 aa5.32□□□□□ -1.56
LINC01339-204ENST00000524094 PCDHB15Q9Y5E8 787 aa5.32□□□□□ -1.56
LINC01339-204ENST00000524094 SLC10A3P09131 477 aa5.31□□□□□ -1.56
LINC01339-204ENST00000524094 YBX3P16989 372 aaKnown RBP eCLIP5.31□□□□□ -1.56
LINC01339-204ENST00000524094 RFC5P40937 340 aa5.31□□□□□ -1.56
LINC01339-204ENST00000524094 TUSC1Q2TAM9 212 aa5.31□□□□□ -1.56
LINC01339-204ENST00000524094 RC3H1Q5TC82 1133 aaKnown RBP5.31□□□□□ -1.56
LINC01339-204ENST00000524094 MRPL14Q6P1L8 145 aaKnown RBP5.31□□□□□ -1.56
LINC01339-204ENST00000524094 MOXD2PA6NHM9 499 aa5.3□□□□□ -1.56
LINC01339-204ENST00000524094 NDUFV2P19404 249 aa5.3□□□□□ -1.56
LINC01339-204ENST00000524094 RIC3Q7Z5B4 369 aa5.3□□□□□ -1.56
LINC01339-204ENST00000524094 HOMEZQ8IX15 550 aa5.3□□□□□ -1.56
LINC01339-204ENST00000524094 MAN1A2O60476 641 aa5.29□□□□□ -1.56
LINC01339-204ENST00000524094 LILRB3O75022 631 aa5.29□□□□□ -1.56
LINC01339-204ENST00000524094 CLK2P49760 499 aaKnown RBP5.29□□□□□ -1.56
LINC01339-204ENST00000524094 QPCTQ16769 361 aa5.29□□□□□ -1.56
LINC01339-204ENST00000524094 RTL5Q5HYW3 569 aaPredicted RBP5.29□□□□□ -1.56
LINC01339-204ENST00000524094 RSBN1LQ6PCB5 846 aaPredicted RBP5.29□□□□□ -1.56
LINC01339-204ENST00000524094 APBB1O00213 710 aa5.28□□□□□ -1.56
LINC01339-204ENST00000524094 GPR37L1O60883 481 aa5.28□□□□□ -1.56
LINC01339-204ENST00000524094 MAP3K10Q02779 954 aa5.28□□□□□ -1.56
LINC01339-204ENST00000524094 PUS10Q3MIT2 529 aaKnown RBP5.28□□□□□ -1.56
LINC01339-204ENST00000524094 LYPD4Q6UWN0 246 aa5.28□□□□□ -1.56
LINC01339-204ENST00000524094 BEND7Q8N7W2 519 aaPredicted RBP5.28□□□□□ -1.56
LINC01339-204ENST00000524094 BANK1Q8NDB2 785 aa5.28□□□□□ -1.56
LINC01339-204ENST00000524094 PCDHGC3Q9UN70 934 aa5.28□□□□□ -1.56
LINC01339-204ENST00000524094 COG6Q9Y2V7 657 aa5.28□□□□□ -1.56
LINC01339-204ENST00000524094 WASF2Q9Y6W5 498 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms