RNA–Protein interactions for RNA: ENST00000521605.1

MRPS28-208, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 2 BASIC

Gene MRPS28, Length 437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-208ENST00000521605 NRXN1Q9ULB1 1477 aa15.72■□□□□ 0.11
MRPS28-208ENST00000521605 PMFBP1Q8TBY8 1022 aa15.72■□□□□ 0.11
MRPS28-208ENST00000521605 ABCC11Q96J66 1382 aa15.72■□□□□ 0.11
MRPS28-208ENST00000521605 CAMTA1Q9Y6Y1 1673 aa15.71■□□□□ 0.11
MRPS28-208ENST00000521605 RGL3Q3MIN7 710 aa15.71■□□□□ 0.11
MRPS28-208ENST00000521605 TIMELESSQ9UNS1 1208 aa15.71■□□□□ 0.11
MRPS28-208ENST00000521605 SAFB2Q14151 953 aaKnown RBP eCLIP15.7■□□□□ 0.1
MRPS28-208ENST00000521605 NBPF8Q3BBV2 869 aa15.7■□□□□ 0.1
MRPS28-208ENST00000521605 NBPF14Q5TI25 921 aa15.7■□□□□ 0.1
MRPS28-208ENST00000521605 FAM196AQ6ZSG2 479 aa15.7■□□□□ 0.1
MRPS28-208ENST00000521605 SPON1Q9HCB6 807 aa15.7■□□□□ 0.1
MRPS28-208ENST00000521605 NUP188Q5SRE5 1749 aa15.7■□□□□ 0.1
MRPS28-208ENST00000521605 YTHDC2Q9H6S0 1430 aaKnown RBP15.69■□□□□ 0.1
MRPS28-208ENST00000521605 SENP3-EIF4A1A0A087X0R7 540 aa15.69■□□□□ 0.1
MRPS28-208ENST00000521605 PARD3Q8TEW0 1356 aa15.69■□□□□ 0.1
MRPS28-208ENST00000521605 RREB1Q92766 1687 aa15.69■□□□□ 0.1
MRPS28-208ENST00000521605 NINLQ9Y2I6 1382 aa15.67■□□□□ 0.1
MRPS28-208ENST00000521605 KCNQ2O43526 872 aa15.67■□□□□ 0.1
MRPS28-208ENST00000521605 SLC4A1APQ9BWU0 796 aaKnown RBP15.67■□□□□ 0.1
MRPS28-208ENST00000521605 PRDM11Q9NQV5 511 aa15.66■□□□□ 0.1
MRPS28-208ENST00000521605 STRN4Q9NRL3 753 aa15.66■□□□□ 0.1
MRPS28-208ENST00000521605 USP35Q9P2H5 1018 aa15.66■□□□□ 0.1
MRPS28-208ENST00000521605 TRPM3Q9HCF6 1732 aaPredicted RBP15.65■□□□□ 0.1
MRPS28-208ENST00000521605 ZNF784Q8NCA9 323 aaPredicted RBP15.65■□□□□ 0.1
MRPS28-208ENST00000521605 SPATA31A1Q5TZJ5 1347 aa15.65■□□□□ 0.1
MRPS28-208ENST00000521605 ALS2Q96Q42 1657 aa15.63■□□□□ 0.09
MRPS28-208ENST00000521605 PIK3C2GO75747 1445 aa15.63■□□□□ 0.09
MRPS28-208ENST00000521605 PDE3BQ13370 1112 aa15.63■□□□□ 0.09
MRPS28-208ENST00000521605 CHRNA2Q15822 529 aa15.63■□□□□ 0.09
MRPS28-208ENST00000521605 GPRASP1Q5JY77 1395 aa15.62■□□□□ 0.09
MRPS28-208ENST00000521605 ANKRD30BQ9BXX2 1392 aa15.62■□□□□ 0.09
MRPS28-208ENST00000521605 PAK3O75914 559 aaPredicted RBP15.62■□□□□ 0.09
MRPS28-208ENST00000521605 IFFO2Q5TF58 517 aa15.62■□□□□ 0.09
MRPS28-208ENST00000521605 PRAM1Q96QH2 718 aa15.62■□□□□ 0.09
MRPS28-208ENST00000521605 CRYBG1Q9Y4K1 1723 aa15.6■□□□□ 0.09
MRPS28-208ENST00000521605 SIRT1Q96EB6 747 aa15.6■□□□□ 0.09
MRPS28-208ENST00000521605 UTRNP46939 3433 aa15.6■□□□□ 0.09
MRPS28-208ENST00000521605 KIAA0232Q92628 1395 aa15.6■□□□□ 0.09
MRPS28-208ENST00000521605 ANKARQ7Z5J8 1434 aa15.6■□□□□ 0.09
MRPS28-208ENST00000521605 NRKQ7Z2Y5 1582 aa15.59■□□□□ 0.09
MRPS28-208ENST00000521605 HIRIP3Q9BW71 556 aaPredicted RBP15.59■□□□□ 0.09
MRPS28-208ENST00000521605 POGKQ9P215 609 aa15.59■□□□□ 0.09
MRPS28-208ENST00000521605 SPATA31E1Q6ZUB1 1445 aa15.59■□□□□ 0.09
MRPS28-208ENST00000521605 EVA1CP58658 441 aa15.57■□□□□ 0.08
MRPS28-208ENST00000521605 C1QTNF8P60827 252 aa15.57■□□□□ 0.08
MRPS28-208ENST00000521605 ZC3H6P61129 1189 aaKnown RBP15.57■□□□□ 0.08
MRPS28-208ENST00000521605 CFAP70Q5T0N1 1121 aa15.57■□□□□ 0.08
MRPS28-208ENST00000521605 NGDNQ8NEJ9 315 aaKnown RBP15.56■□□□□ 0.08
MRPS28-208ENST00000521605 MYOM1P52179 1685 aa15.55■□□□□ 0.08
MRPS28-208ENST00000521605 PRR36Q9H6K5 1346 aa15.55■□□□□ 0.08
MRPS28-208ENST00000521605 ZBTB7AO95365 584 aa15.55■□□□□ 0.08
MRPS28-208ENST00000521605 PDGFDQ9GZP0 370 aaPredicted RBP15.55■□□□□ 0.08
MRPS28-208ENST00000521605 C14orf93Q9H972 538 aaKnown RBP15.55■□□□□ 0.08
MRPS28-208ENST00000521605 MINK1Q8N4C8 1332 aaPredicted RBP15.54■□□□□ 0.08
MRPS28-208ENST00000521605 NUTM2GQ5VZR2 741 aa15.54■□□□□ 0.08
MRPS28-208ENST00000521605 BARGINQ6ZT62 677 aa15.54■□□□□ 0.08
MRPS28-208ENST00000521605 ANO8Q9HCE9 1232 aaPredicted RBP15.54■□□□□ 0.08
MRPS28-208ENST00000521605 PHRF1Q9P1Y6 1649 aaKnown RBP15.54■□□□□ 0.08
MRPS28-208ENST00000521605 SSH2Q76I76 1423 aa15.53■□□□□ 0.08
MRPS28-208ENST00000521605 LARP1Q6PKG0 1096 aaKnown RBP15.53■□□□□ 0.08
MRPS28-208ENST00000521605 CASZ1Q86V15 1759 aa15.52■□□□□ 0.08
MRPS28-208ENST00000521605 ATF5Q9Y2D1 282 aaPredicted RBP15.52■□□□□ 0.08
MRPS28-208ENST00000521605 TCP11L2Q8N4U5 519 aa15.51■□□□□ 0.07
MRPS28-208ENST00000521605 TULP4Q9NRJ4 1543 aa15.5■□□□□ 0.07
MRPS28-208ENST00000521605 FHDC1Q9C0D6 1143 aaPredicted RBP15.5■□□□□ 0.07
MRPS28-208ENST00000521605 BCL11BQ9C0K0 894 aaPredicted RBP15.5■□□□□ 0.07
MRPS28-208ENST00000521605 TRAK1Q9UPV9 953 aa15.5■□□□□ 0.07
MRPS28-208ENST00000521605 EIF3AQ14152 1382 aaKnown RBP15.49■□□□□ 0.07
MRPS28-208ENST00000521605 DLC1Q96QB1 1528 aa15.49■□□□□ 0.07
MRPS28-208ENST00000521605 PTGER2P43116 358 aa15.49■□□□□ 0.07
MRPS28-208ENST00000521605 SYT17Q9BSW7 474 aa15.48■□□□□ 0.07
MRPS28-208ENST00000521605 ZNF316A6NFI3 1004 aaPredicted RBP15.47■□□□□ 0.07
MRPS28-208ENST00000521605 WASLO00401 505 aaPredicted RBP15.47■□□□□ 0.07
MRPS28-208ENST00000521605 MPHOSPH9Q99550 1183 aa15.47■□□□□ 0.07
MRPS28-208ENST00000521605 OVOS2A0A0G2JMS6 1433 aa15.46■□□□□ 0.07
MRPS28-208ENST00000521605 OVOS2A0A0J9YW53 1432 aa15.46■□□□□ 0.07
MRPS28-208ENST00000521605 OVOS2Q6IE36 1432 aa15.46■□□□□ 0.07
MRPS28-208ENST00000521605 PTF1AQ7RTS3 328 aa15.46■□□□□ 0.07
MRPS28-208ENST00000521605 CHD4Q14839 1912 aa15.46■□□□□ 0.07
MRPS28-208ENST00000521605 PARP4Q9UKK3 1724 aaKnown RBP15.46■□□□□ 0.06
MRPS28-208ENST00000521605 RGPD3A6NKT7 1758 aaPredicted RBP15.45■□□□□ 0.06
MRPS28-208ENST00000521605 RGPD4Q7Z3J3 1758 aa15.45■□□□□ 0.06
MRPS28-208ENST00000521605 PLSCR1O15162 318 aa15.45■□□□□ 0.06
MRPS28-208ENST00000521605 PEAK1Q9H792 1746 aa15.44■□□□□ 0.06
MRPS28-208ENST00000521605 GIGYF1O75420 1035 aaPredicted RBP15.44■□□□□ 0.06
MRPS28-208ENST00000521605 ATP7BP35670 1465 aa15.44■□□□□ 0.06
MRPS28-208ENST00000521605 ZBTB7CA1YPR0 619 aa15.43■□□□□ 0.06
MRPS28-208ENST00000521605 STK32BQ9NY57 414 aa15.43■□□□□ 0.06
MRPS28-208ENST00000521605 THRAP3Q9Y2W1 955 aaKnown RBP15.43■□□□□ 0.06
MRPS28-208ENST00000521605 LMO7Q8WWI1 1683 aa15.43■□□□□ 0.06
MRPS28-208ENST00000521605 SBF2Q86WG5 1849 aa15.43■□□□□ 0.06
MRPS28-208ENST00000521605 ITSN1Q15811 1721 aa15.43■□□□□ 0.06
MRPS28-208ENST00000521605 C11orf95C9JLR9 678 aaPredicted RBP15.42■□□□□ 0.06
MRPS28-208ENST00000521605 PROM2Q8N271 834 aa15.42■□□□□ 0.06
MRPS28-208ENST00000521605 CEP350Q5VT06 3117 aa15.42■□□□□ 0.06
MRPS28-208ENST00000521605 ADGRB1O14514 1584 aa15.41■□□□□ 0.06
MRPS28-208ENST00000521605 NUDT16Q96DE0 195 aaKnown RBP15.41■□□□□ 0.06
MRPS28-208ENST00000521605 LRRC37A3O60309 1634 aa15.41■□□□□ 0.06
MRPS28-208ENST00000521605 COL5A2P05997 1499 aaPredicted RBP15.4■□□□□ 0.06
MRPS28-208ENST00000521605 DDB1Q16531 1140 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 128.9 ms