RNA–Protein interactions for RNA: ENST00000519309.5

CTNNA1-215, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-215ENST00000519309 DHX57Q6P158 1386 aaKnown RBP12.66□□□□□ -0.38
CTNNA1-215ENST00000519309 ATP7BP35670 1465 aa12.65□□□□□ -0.38
CTNNA1-215ENST00000519309 PARP4Q9UKK3 1724 aaKnown RBP12.65□□□□□ -0.38
CTNNA1-215ENST00000519309 TOPAZ1Q8N9V7 1692 aa12.65□□□□□ -0.38
CTNNA1-215ENST00000519309 LMO7Q8WWI1 1683 aa12.65□□□□□ -0.38
CTNNA1-215ENST00000519309 CAMKK2Q96RR4 588 aa12.65□□□□□ -0.38
CTNNA1-215ENST00000519309 C14orf93Q9H972 538 aaKnown RBP12.65□□□□□ -0.38
CTNNA1-215ENST00000519309 NRKQ7Z2Y5 1582 aa12.64□□□□□ -0.39
CTNNA1-215ENST00000519309 EZH2Q15910 746 aaKnown RBP12.64□□□□□ -0.39
CTNNA1-215ENST00000519309 CASZ1Q86V15 1759 aa12.64□□□□□ -0.39
CTNNA1-215ENST00000519309 ACIN1Q9UKV3 1341 aaKnown RBP12.63□□□□□ -0.39
CTNNA1-215ENST00000519309 ARHGEF28Q8N1W1 1705 aaKnown RBP12.63□□□□□ -0.39
CTNNA1-215ENST00000519309 RGL3Q3MIN7 710 aa12.63□□□□□ -0.39
CTNNA1-215ENST00000519309 FAM182BQ5T319 152 aa12.63□□□□□ -0.39
CTNNA1-215ENST00000519309 LMOD2Q6P5Q4 547 aa12.63□□□□□ -0.39
CTNNA1-215ENST00000519309 GPRASP1Q5JY77 1395 aa12.63□□□□□ -0.39
CTNNA1-215ENST00000519309 NINLQ9Y2I6 1382 aa12.63□□□□□ -0.39
CTNNA1-215ENST00000519309 SPATA31A1Q5TZJ5 1347 aa12.62□□□□□ -0.39
CTNNA1-215ENST00000519309 PEAK1Q9H792 1746 aa12.62□□□□□ -0.39
CTNNA1-215ENST00000519309 YY1P25490 414 aa12.62□□□□□ -0.39
CTNNA1-215ENST00000519309 PRAM1Q96QH2 718 aa12.62□□□□□ -0.39
CTNNA1-215ENST00000519309 CAMTA1Q9Y6Y1 1673 aa12.61□□□□□ -0.39
CTNNA1-215ENST00000519309 FAM196AQ6ZSG2 479 aa12.61□□□□□ -0.39
CTNNA1-215ENST00000519309 PRR36Q9H6K5 1346 aa12.61□□□□□ -0.39
CTNNA1-215ENST00000519309 SBF2Q86WG5 1849 aa12.6□□□□□ -0.39
CTNNA1-215ENST00000519309 WNK3Q9BYP7 1800 aa12.6□□□□□ -0.39
CTNNA1-215ENST00000519309 PLEKHG5O94827 1062 aa12.6□□□□□ -0.39
CTNNA1-215ENST00000519309 PMFBP1Q8TBY8 1022 aa12.6□□□□□ -0.39
CTNNA1-215ENST00000519309 SSH2Q76I76 1423 aa12.6□□□□□ -0.39
CTNNA1-215ENST00000519309 KIAA0232Q92628 1395 aa12.59□□□□□ -0.39
CTNNA1-215ENST00000519309 PRDM11Q9NQV5 511 aa12.59□□□□□ -0.39
CTNNA1-215ENST00000519309 LRRC37A3O60309 1634 aa12.59□□□□□ -0.39
CTNNA1-215ENST00000519309 TRIM37O94972 964 aa12.58□□□□□ -0.4
CTNNA1-215ENST00000519309 CFAP70Q5T0N1 1121 aa12.58□□□□□ -0.4
CTNNA1-215ENST00000519309 SAFB2Q14151 953 aaKnown RBP eCLIP12.57□□□□□ -0.4
CTNNA1-215ENST00000519309 BARGINQ6ZT62 677 aa12.57□□□□□ -0.4
CTNNA1-215ENST00000519309 PPARGC1BQ86YN6 1023 aaKnown RBP12.57□□□□□ -0.4
CTNNA1-215ENST00000519309 MYOM1P52179 1685 aa12.57□□□□□ -0.4
CTNNA1-215ENST00000519309 MPHOSPH9Q99550 1183 aa12.56□□□□□ -0.4
CTNNA1-215ENST00000519309 CPDO75976 1380 aa12.56□□□□□ -0.4
CTNNA1-215ENST00000519309 APBA3O96018 575 aa12.55□□□□□ -0.4
CTNNA1-215ENST00000519309 POGKQ9P215 609 aa12.55□□□□□ -0.4
CTNNA1-215ENST00000519309 POLR3AO14802 1390 aaPredicted RBP12.55□□□□□ -0.4
CTNNA1-215ENST00000519309 WASLO00401 505 aaPredicted RBP12.54□□□□□ -0.4
CTNNA1-215ENST00000519309 SPON1Q9HCB6 807 aa12.54□□□□□ -0.4
CTNNA1-215ENST00000519309 CHD4Q14839 1912 aa12.54□□□□□ -0.4
CTNNA1-215ENST00000519309 OVOS2A0A0G2JMS6 1433 aa12.54□□□□□ -0.4
CTNNA1-215ENST00000519309 OVOS2A0A0J9YW53 1432 aa12.54□□□□□ -0.4
CTNNA1-215ENST00000519309 OVOS2Q6IE36 1432 aa12.54□□□□□ -0.4
CTNNA1-215ENST00000519309 AKAP12Q02952 1782 aa12.53□□□□□ -0.4
CTNNA1-215ENST00000519309 COL5A2P05997 1499 aaPredicted RBP12.53□□□□□ -0.4
CTNNA1-215ENST00000519309 NBPF8Q3BBV2 869 aa12.53□□□□□ -0.4
CTNNA1-215ENST00000519309 NBPF14Q5TI25 921 aa12.53□□□□□ -0.4
CTNNA1-215ENST00000519309 KCNQ2O43526 872 aa12.52□□□□□ -0.41
CTNNA1-215ENST00000519309 HIRIP3Q9BW71 556 aaPredicted RBP12.52□□□□□ -0.41
CTNNA1-215ENST00000519309 USP19O94966 1318 aa12.52□□□□□ -0.41
CTNNA1-215ENST00000519309 MINK1Q8N4C8 1332 aaPredicted RBP12.52□□□□□ -0.41
CTNNA1-215ENST00000519309 C11orf95C9JLR9 678 aaPredicted RBP12.51□□□□□ -0.41
CTNNA1-215ENST00000519309 CHRNA2Q15822 529 aa12.51□□□□□ -0.41
CTNNA1-215ENST00000519309 NGDNQ8NEJ9 315 aaKnown RBP12.51□□□□□ -0.41
CTNNA1-215ENST00000519309 PDE3BQ13370 1112 aa12.5□□□□□ -0.41
CTNNA1-215ENST00000519309 STRN4Q9NRL3 753 aa12.5□□□□□ -0.41
CTNNA1-215ENST00000519309 PPP1R1BQ9UD71 204 aaPredicted RBP12.5□□□□□ -0.41
CTNNA1-215ENST00000519309 THRAP3Q9Y2W1 955 aaKnown RBP12.5□□□□□ -0.41
CTNNA1-215ENST00000519309 KIAA1210Q9ULL0 1709 aa12.5□□□□□ -0.41
CTNNA1-215ENST00000519309 SLIT3O75094 1523 aa12.49□□□□□ -0.41
CTNNA1-215ENST00000519309 BCL9O00512 1426 aa12.49□□□□□ -0.41
CTNNA1-215ENST00000519309 PAK3O75914 559 aaPredicted RBP12.49□□□□□ -0.41
CTNNA1-215ENST00000519309 TCP11L2Q8N4U5 519 aa12.49□□□□□ -0.41
CTNNA1-215ENST00000519309 TRAK1Q9UPV9 953 aa12.49□□□□□ -0.41
CTNNA1-215ENST00000519309 COL18A1P39060 1754 aa12.48□□□□□ -0.41
CTNNA1-215ENST00000519309 UTRNP46939 3433 aa12.48□□□□□ -0.41
CTNNA1-215ENST00000519309 CRB1P82279 1406 aa12.48□□□□□ -0.41
CTNNA1-215ENST00000519309 DCAF8L1A6NGE4 600 aa12.48□□□□□ -0.41
CTNNA1-215ENST00000519309 ZC3H6P61129 1189 aaKnown RBP12.47□□□□□ -0.41
CTNNA1-215ENST00000519309 LARP1Q6PKG0 1096 aaKnown RBP12.47□□□□□ -0.41
CTNNA1-215ENST00000519309 ANO8Q9HCE9 1232 aaPredicted RBP12.47□□□□□ -0.41
CTNNA1-215ENST00000519309 PAPPAQ13219 1627 aa12.47□□□□□ -0.41
CTNNA1-215ENST00000519309 QRICH2Q9H0J4 1663 aa12.46□□□□□ -0.41
CTNNA1-215ENST00000519309 PLSCR1O15162 318 aa12.46□□□□□ -0.41
CTNNA1-215ENST00000519309 USP35Q9P2H5 1018 aa12.46□□□□□ -0.41
CTNNA1-215ENST00000519309 AATKQ6ZMQ8 1374 aa12.45□□□□□ -0.42
CTNNA1-215ENST00000519309 NUDT16Q96DE0 195 aaKnown RBP12.45□□□□□ -0.42
CTNNA1-215ENST00000519309 PIK3C2AO00443 1686 aa12.45□□□□□ -0.42
CTNNA1-215ENST00000519309 NHSQ6T4R5 1651 aa12.45□□□□□ -0.42
CTNNA1-215ENST00000519309 BRD4O60885 1362 aaPredicted RBP12.44□□□□□ -0.42
CTNNA1-215ENST00000519309 ZNF784Q8NCA9 323 aaPredicted RBP12.44□□□□□ -0.42
CTNNA1-215ENST00000519309 ACEP12821 1306 aa12.43□□□□□ -0.42
CTNNA1-215ENST00000519309 PTGER2P43116 358 aa12.43□□□□□ -0.42
CTNNA1-215ENST00000519309 EVA1CP58658 441 aa12.43□□□□□ -0.42
CTNNA1-215ENST00000519309 STAC3Q96MF2 364 aa12.43□□□□□ -0.42
CTNNA1-215ENST00000519309 TRPM1Q7Z4N2 1603 aa12.43□□□□□ -0.42
CTNNA1-215ENST00000519309 COL24A1Q17RW2 1714 aa12.42□□□□□ -0.42
CTNNA1-215ENST00000519309 QSER1Q2KHR3 1735 aa12.42□□□□□ -0.42
CTNNA1-215ENST00000519309 ABCC6O95255 1503 aa12.42□□□□□ -0.42
CTNNA1-215ENST00000519309 PLEKHG3A1L390 1219 aa12.42□□□□□ -0.42
CTNNA1-215ENST00000519309 MAP3K5Q99683 1374 aa12.42□□□□□ -0.42
CTNNA1-215ENST00000519309 NUTM2GQ5VZR2 741 aa12.41□□□□□ -0.42
CTNNA1-215ENST00000519309 BCL11BQ9C0K0 894 aaPredicted RBP12.41□□□□□ -0.42
CTNNA1-215ENST00000519309 CCDC61Q9Y6R9 512 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms