RNA–Protein interactions for RNA: ENST00000517671.5

NPM1-204, Transcript of nucleophosmin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPM1, Length 1,338 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-204ENST00000517671 AFAP1Q8N556 730 aa12.78□□□□□ -0.36
NPM1-204ENST00000517671 TMEM134Q9H6X4 195 aa12.78□□□□□ -0.36
NPM1-204ENST00000517671 SOWAHBA6NEL2 793 aa12.77□□□□□ -0.37
NPM1-204ENST00000517671 RNF40O75150 1001 aa12.77□□□□□ -0.37
NPM1-204ENST00000517671 SLF2Q8IX21 1173 aa12.77□□□□□ -0.37
NPM1-204ENST00000517671 CNTLNQ9NXG0 1405 aa12.76□□□□□ -0.37
NPM1-204ENST00000517671 TRAPPC8Q9Y2L5 1435 aa12.76□□□□□ -0.37
NPM1-204ENST00000517671 TROQ12816 1431 aaPredicted RBP12.75□□□□□ -0.37
NPM1-204ENST00000517671 RSPH4AQ5TD94 716 aa12.75□□□□□ -0.37
NPM1-204ENST00000517671 PHOX2BQ99453 314 aa12.75□□□□□ -0.37
NPM1-204ENST00000517671 DAXXQ9UER7 740 aaPredicted RBP12.75□□□□□ -0.37
NPM1-204ENST00000517671 IQSEC2Q5JU85 1478 aa12.74□□□□□ -0.37
NPM1-204ENST00000517671 MLH3Q9UHC1 1453 aa12.74□□□□□ -0.37
NPM1-204ENST00000517671 SETD1BQ9UPS6 1966 aaKnown RBP12.74□□□□□ -0.37
NPM1-204ENST00000517671 A0A0G2JS52 829 aa12.74□□□□□ -0.37
NPM1-204ENST00000517671 BCAMP50895 628 aa12.74□□□□□ -0.37
NPM1-204ENST00000517671 NECTIN2Q92692 538 aa12.74□□□□□ -0.37
NPM1-204ENST00000517671 TRIM66O15016 1216 aa12.73□□□□□ -0.37
NPM1-204ENST00000517671 PPP4CP60510 307 aa12.73□□□□□ -0.37
NPM1-204ENST00000517671 NLRP7Q8WX94 980 aa12.73□□□□□ -0.37
NPM1-204ENST00000517671 FER1L4A9Z1Z3 1794 aa12.73□□□□□ -0.37
NPM1-204ENST00000517671 PREX1Q8TCU6 1659 aa12.72□□□□□ -0.37
NPM1-204ENST00000517671 CLCN1P35523 988 aa12.72□□□□□ -0.37
NPM1-204ENST00000517671 MDM2Q00987 491 aaPredicted RBP12.72□□□□□ -0.37
NPM1-204ENST00000517671 HPS5Q9UPZ3 1129 aa12.72□□□□□ -0.37
NPM1-204ENST00000517671 REREQ9P2R6 1566 aa12.72□□□□□ -0.37
NPM1-204ENST00000517671 ARHGAP5Q13017 1502 aa12.72□□□□□ -0.37
NPM1-204ENST00000517671 CDK13Q14004 1512 aaKnown RBP12.72□□□□□ -0.37
NPM1-204ENST00000517671 TTLL12Q14166 644 aaPredicted RBP12.71□□□□□ -0.37
NPM1-204ENST00000517671 IRX2Q9BZI1 471 aaPredicted RBP12.71□□□□□ -0.37
NPM1-204ENST00000517671 TSR3Q9UJK0 312 aaKnown RBP12.71□□□□□ -0.37
NPM1-204ENST00000517671 AGLP35573 1532 aa12.71□□□□□ -0.37
NPM1-204ENST00000517671 PRKCSHP14314 528 aaPredicted RBP12.7□□□□□ -0.38
NPM1-204ENST00000517671 SULF1Q8IWU6 871 aa12.7□□□□□ -0.38
NPM1-204ENST00000517671 KDM5CP41229 1560 aa12.7□□□□□ -0.38
NPM1-204ENST00000517671 AMHR2Q16671 573 aa12.69□□□□□ -0.38
NPM1-204ENST00000517671 GPCPD1Q9NPB8 672 aa12.69□□□□□ -0.38
NPM1-204ENST00000517671 KIF14Q15058 1648 aa12.69□□□□□ -0.38
NPM1-204ENST00000517671 NPATQ14207 1427 aa12.69□□□□□ -0.38
NPM1-204ENST00000517671 ILDR2Q71H61 639 aa12.68□□□□□ -0.38
NPM1-204ENST00000517671 DDX11L8A8MPP1 907 aa12.67□□□□□ -0.38
NPM1-204ENST00000517671 PDE4DQ08499 809 aa12.67□□□□□ -0.38
NPM1-204ENST00000517671 RDH13Q8NBN7 331 aa12.66□□□□□ -0.38
NPM1-204ENST00000517671 MYO5CQ9NQX4 1742 aa12.66□□□□□ -0.38
NPM1-204ENST00000517671 ZMYM3Q14202 1370 aa12.65□□□□□ -0.38
NPM1-204ENST00000517671 CCDC18Q5T9S5 1454 aa12.65□□□□□ -0.38
NPM1-204ENST00000517671 ARHGAP35Q9NRY4 1499 aa12.65□□□□□ -0.38
NPM1-204ENST00000517671 NCOA1Q15788 1441 aa12.65□□□□□ -0.38
NPM1-204ENST00000517671 NYAP1Q6ZVC0 841 aa12.64□□□□□ -0.39
NPM1-204ENST00000517671 WBP1LQ9NX94 342 aa12.64□□□□□ -0.39
NPM1-204ENST00000517671 SPAG9O60271 1321 aaKnown RBP12.64□□□□□ -0.39
NPM1-204ENST00000517671 SIGLEC1Q9BZZ2 1709 aa12.64□□□□□ -0.39
NPM1-204ENST00000517671 PRR14Q9BWN1 585 aa12.62□□□□□ -0.39
NPM1-204ENST00000517671 CASKIN1Q8WXD9 1431 aa12.62□□□□□ -0.39
NPM1-204ENST00000517671 DIP2CQ9Y2E4 1556 aa12.62□□□□□ -0.39
NPM1-204ENST00000517671 UBAP1LF5GYI3 381 aa12.62□□□□□ -0.39
NPM1-204ENST00000517671 KMT5BQ4FZB7 885 aa12.62□□□□□ -0.39
NPM1-204ENST00000517671 STRCQ7RTU9 1775 aa12.61□□□□□ -0.39
NPM1-204ENST00000517671 KIAA1107Q9UPP5 1409 aa12.61□□□□□ -0.39
NPM1-204ENST00000517671 SSTR3P32745 418 aaPredicted RBP12.61□□□□□ -0.39
NPM1-204ENST00000517671 PLEKHH2Q8IVE3 1493 aa12.6□□□□□ -0.39
NPM1-204ENST00000517671 GIGYF2Q6Y7W6 1299 aaKnown RBP12.6□□□□□ -0.39
NPM1-204ENST00000517671 PARP9Q8IXQ6 854 aa12.6□□□□□ -0.39
NPM1-204ENST00000517671 TMUB1Q9BVT8 246 aa12.6□□□□□ -0.39
NPM1-204ENST00000517671 FAM217BQ9NTX9 383 aaPredicted RBP12.6□□□□□ -0.39
NPM1-204ENST00000517671 ZNF777Q9ULD5 760 aaPredicted RBP12.6□□□□□ -0.39
NPM1-204ENST00000517671 LTBP4Q8N2S1 1624 aa12.59□□□□□ -0.39
NPM1-204ENST00000517671 SLC10A3P09131 477 aa12.59□□□□□ -0.39
NPM1-204ENST00000517671 REPIN1Q9BWE0 567 aaKnown RBP12.59□□□□□ -0.39
NPM1-204ENST00000517671 CFDP1Q9UEE9 299 aaPredicted RBP12.59□□□□□ -0.39
NPM1-204ENST00000517671 PLA2R1Q13018 1463 aa12.58□□□□□ -0.39
NPM1-204ENST00000517671 ABCC1P33527 1531 aa12.58□□□□□ -0.4
NPM1-204ENST00000517671 TOM1O60784 492 aa12.58□□□□□ -0.4
NPM1-204ENST00000517671 ITGBL1O95965 494 aaPredicted RBP12.58□□□□□ -0.4
NPM1-204ENST00000517671 CFHP08603 1231 aa12.58□□□□□ -0.4
NPM1-204ENST00000517671 SPATA31D1Q6ZQQ2 1576 aa12.56□□□□□ -0.4
NPM1-204ENST00000517671 C3P01024 1663 aa12.56□□□□□ -0.4
NPM1-204ENST00000517671 HNRNPMP52272 730 aaKnown RBP eCLIP12.56□□□□□ -0.45e-7■■■■■ 31.8
NPM1-204ENST00000517671 GGT6Q6P531 493 aa12.56□□□□□ -0.4
NPM1-204ENST00000517671 CAMSAP1Q5T5Y3 1602 aa12.55□□□□□ -0.4
NPM1-204ENST00000517671 ABCA6Q8N139 1617 aa12.55□□□□□ -0.4
NPM1-204ENST00000517671 CD46P15529 392 aa12.55□□□□□ -0.4
NPM1-204ENST00000517671 GCGRP47871 477 aa12.54□□□□□ -0.4
NPM1-204ENST00000517671 NEUROD2Q15784 382 aa12.54□□□□□ -0.4
NPM1-204ENST00000517671 ZNF335Q9H4Z2 1342 aaPredicted RBP12.54□□□□□ -0.4
NPM1-204ENST00000517671 PREX2Q70Z35 1606 aa12.53□□□□□ -0.4
NPM1-204ENST00000517671 APLP1P51693 650 aa12.53□□□□□ -0.4
NPM1-204ENST00000517671 CCNB3Q8WWL7 1395 aa12.53□□□□□ -0.4
NPM1-204ENST00000517671 A2MP01023 1474 aa12.53□□□□□ -0.4
NPM1-204ENST00000517671 FYCO1Q9BQS8 1478 aa12.53□□□□□ -0.4
NPM1-204ENST00000517671 GPATCH8Q9UKJ3 1502 aaKnown RBP12.53□□□□□ -0.4
NPM1-204ENST00000517671 MROH2AA6NES4 1674 aa12.53□□□□□ -0.4
NPM1-204ENST00000517671 ANKLE2Q86XL3 938 aa12.52□□□□□ -0.41
NPM1-204ENST00000517671 THEMISQ8N1K5 641 aaPredicted RBP12.52□□□□□ -0.41
NPM1-204ENST00000517671 PTPRKQ15262 1439 aa12.52□□□□□ -0.41
NPM1-204ENST00000517671 TCOF1Q13428 1488 aaKnown RBP12.52□□□□□ -0.41
NPM1-204ENST00000517671 SAMD9LQ8IVG5 1584 aa12.52□□□□□ -0.41
NPM1-204ENST00000517671 CDC42BPBQ9Y5S2 1711 aa12.52□□□□□ -0.41
NPM1-204ENST00000517671 ACTN4O43707 911 aaKnown RBP12.51□□□□□ -0.41
NPM1-204ENST00000517671 GRIPAP1Q4V328 841 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 7 ms