RNA–Protein interactions for RNA: ENST00000516409.1

SCARNA15.2-201, small Cajal body-specific RNA 15, humanhuman

BASIC

Gene SCARNA15, Length 127 nt, Biotype scaRNA, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA15.2-201ENST00000516409 USP17L15C9J2P7 530 aa5.39□□□□□ -1.55
SCARNA15.2-201ENST00000516409 USP17L10C9JJH3 530 aa5.39□□□□□ -1.55
SCARNA15.2-201ENST00000516409 USP17L13C9JLJ4 530 aa5.39□□□□□ -1.55
SCARNA15.2-201ENST00000516409 USP17L12C9JPN9 530 aa5.39□□□□□ -1.55
SCARNA15.2-201ENST00000516409 USP17L11C9JVI0 530 aa5.39□□□□□ -1.55
SCARNA15.2-201ENST00000516409 USP17L21D6R901 530 aa5.39□□□□□ -1.55
SCARNA15.2-201ENST00000516409 USP17L18D6R9N7 530 aa5.39□□□□□ -1.55
SCARNA15.2-201ENST00000516409 USP17L22D6RA61 530 aa5.39□□□□□ -1.55
SCARNA15.2-201ENST00000516409 USP17L17D6RBQ6 530 aa5.39□□□□□ -1.55
SCARNA15.2-201ENST00000516409 USP17L19D6RCP7 530 aa5.39□□□□□ -1.55
SCARNA15.2-201ENST00000516409 USP17L20D6RJB6 530 aa5.39□□□□□ -1.55
SCARNA15.2-201ENST00000516409 IGSF3O75054 1194 aa5.39□□□□□ -1.55
SCARNA15.2-201ENST00000516409 F12P00748 615 aaPredicted RBP5.39□□□□□ -1.55
SCARNA15.2-201ENST00000516409 USP17L24Q0WX57 530 aa5.39□□□□□ -1.55
SCARNA15.2-201ENST00000516409 CRTC2Q53ET0 693 aaPredicted RBP5.39□□□□□ -1.55
SCARNA15.2-201ENST00000516409 PHLDB3Q6NSJ2 640 aa5.39□□□□□ -1.55
SCARNA15.2-201ENST00000516409 LAPTM4BQ86VI4 370 aa5.39□□□□□ -1.55
SCARNA15.2-201ENST00000516409 ZFRQ96KR1 1074 aaKnown RBP5.39□□□□□ -1.55
SCARNA15.2-201ENST00000516409 SLAIN2Q9P270 581 aa5.39□□□□□ -1.55
SCARNA15.2-201ENST00000516409 MYT1LQ9UL68 1186 aa5.39□□□□□ -1.55
SCARNA15.2-201ENST00000516409 AMOTL2Q9Y2J4 779 aa5.39□□□□□ -1.55
SCARNA15.2-201ENST00000516409 ERBB3P21860 1342 aa5.39□□□□□ -1.55
SCARNA15.2-201ENST00000516409 TXNDC2Q86VQ3 553 aa5.38□□□□□ -1.55
SCARNA15.2-201ENST00000516409 NFATC2IPQ8NCF5 419 aa5.38□□□□□ -1.55
SCARNA15.2-201ENST00000516409 CCER1Q8TC90 406 aaPredicted RBP5.38□□□□□ -1.55
SCARNA15.2-201ENST00000516409 USB1Q9BQ65 265 aaKnown RBP5.38□□□□□ -1.55
SCARNA15.2-201ENST00000516409 NBPF3Q9H094 633 aa5.38□□□□□ -1.55
SCARNA15.2-201ENST00000516409 MKRN1Q9UHC7 482 aaKnown RBP5.38□□□□□ -1.55
SCARNA15.2-201ENST00000516409 CTHP32929 405 aa5.37□□□□□ -1.55
SCARNA15.2-201ENST00000516409 NCOA4Q13772 614 aa5.37□□□□□ -1.55
SCARNA15.2-201ENST00000516409 PLEKHM2Q8IWE5 1019 aa5.37□□□□□ -1.55
SCARNA15.2-201ENST00000516409 LRCH3Q96II8 777 aa5.37□□□□□ -1.55
SCARNA15.2-201ENST00000516409 UNCXA6NJT0 531 aa5.36□□□□□ -1.55
SCARNA15.2-201ENST00000516409 FAM196BA6NMK8 535 aa5.36□□□□□ -1.55
SCARNA15.2-201ENST00000516409 BHMG1C9JSJ3 638 aaPredicted RBP5.36□□□□□ -1.55
SCARNA15.2-201ENST00000516409 JUNDP17535 347 aa5.36□□□□□ -1.55
SCARNA15.2-201ENST00000516409 RASA1P20936 1047 aa5.36□□□□□ -1.55
SCARNA15.2-201ENST00000516409 BRICD5Q6PL45 260 aa5.36□□□□□ -1.55
SCARNA15.2-201ENST00000516409 ZC3H4Q9UPT8 1303 aaKnown RBP5.36□□□□□ -1.55
SCARNA15.2-201ENST00000516409 LOC105371045A0A1W2PR82 267 aa5.35□□□□□ -1.55
SCARNA15.2-201ENST00000516409 SSFA2P28290 1259 aa5.35□□□□□ -1.55
SCARNA15.2-201ENST00000516409 PBX2P40425 430 aa5.35□□□□□ -1.55
SCARNA15.2-201ENST00000516409 FAM69CQ0P6D2 419 aa5.35□□□□□ -1.55
SCARNA15.2-201ENST00000516409 KCNH2Q12809 1159 aa5.35□□□□□ -1.55
SCARNA15.2-201ENST00000516409 PTK7Q13308 1070 aa5.35□□□□□ -1.55
SCARNA15.2-201ENST00000516409 PTPRNQ16849 979 aa5.35□□□□□ -1.55
SCARNA15.2-201ENST00000516409 SLFNL1Q499Z3 407 aa5.35□□□□□ -1.55
SCARNA15.2-201ENST00000516409 LARP1Q6PKG0 1096 aaKnown RBP5.35□□□□□ -1.55
SCARNA15.2-201ENST00000516409 RNF135Q8IUD6 432 aa5.35□□□□□ -1.55
SCARNA15.2-201ENST00000516409 MRPL50Q8N5N7 158 aaKnown RBP5.35□□□□□ -1.55
SCARNA15.2-201ENST00000516409 PLPP7Q8NBV4 271 aa5.35□□□□□ -1.55
SCARNA15.2-201ENST00000516409 FAM200AQ8TCP9 573 aa5.35□□□□□ -1.55
SCARNA15.2-201ENST00000516409 THAP11Q96EK4 314 aa5.35□□□□□ -1.55
SCARNA15.2-201ENST00000516409 OCSTAMPQ9BR26 566 aa5.35□□□□□ -1.55
SCARNA15.2-201ENST00000516409 CDKN2AIPQ9NXV6 580 aaPredicted RBP5.35□□□□□ -1.55
SCARNA15.2-201ENST00000516409 CEP126Q9P2H0 1117 aa5.35□□□□□ -1.55
SCARNA15.2-201ENST00000516409 PCDHB9Q9Y5E1 797 aa5.35□□□□□ -1.55
SCARNA15.2-201ENST00000516409 FMNL1O95466 1100 aaPredicted RBP5.34□□□□□ -1.55
SCARNA15.2-201ENST00000516409 SCNN1AP37088 669 aa5.34□□□□□ -1.55
SCARNA15.2-201ENST00000516409 SERPINB4P48594 390 aa5.34□□□□□ -1.55
SCARNA15.2-201ENST00000516409 SCUBE3Q8IX30 993 aa5.34□□□□□ -1.55
SCARNA15.2-201ENST00000516409 ATP5J2-PTCD1G3V325 749 aa5.33□□□□□ -1.56
SCARNA15.2-201ENST00000516409 ATP2B4P23634 1241 aa5.33□□□□□ -1.56
SCARNA15.2-201ENST00000516409 ARID4AP29374 1257 aaPredicted RBP5.33□□□□□ -1.56
SCARNA15.2-201ENST00000516409 APLP1P51693 650 aa5.33□□□□□ -1.56
SCARNA15.2-201ENST00000516409 PTK2Q05397 1052 aa5.33□□□□□ -1.56
SCARNA15.2-201ENST00000516409 ANKMY2Q8IV38 441 aa5.33□□□□□ -1.56
SCARNA15.2-201ENST00000516409 PHTF2Q8N3S3 785 aa5.33□□□□□ -1.56
SCARNA15.2-201ENST00000516409 CLP1Q92989 425 aaKnown RBP5.33□□□□□ -1.56
SCARNA15.2-201ENST00000516409 ZNF594Q96JF6 807 aaPredicted RBP5.33□□□□□ -1.56
SCARNA15.2-201ENST00000516409 PRR14Q9BWN1 585 aa5.33□□□□□ -1.56
SCARNA15.2-201ENST00000516409 PCDHB3Q9Y5E6 796 aa5.33□□□□□ -1.56
SCARNA15.2-201ENST00000516409 SOWAHDA6NJG2 315 aa5.32□□□□□ -1.56
SCARNA15.2-201ENST00000516409 CCNYL3P0C7X3 344 aa5.32□□□□□ -1.56
SCARNA15.2-201ENST00000516409 CLDN10P78369 228 aa5.32□□□□□ -1.56
SCARNA15.2-201ENST00000516409 DPYDQ12882 1025 aa5.32□□□□□ -1.56
SCARNA15.2-201ENST00000516409 TSGA10IPQ3SY00 556 aa5.32□□□□□ -1.56
SCARNA15.2-201ENST00000516409 NOM1Q5C9Z4 860 aaKnown RBP5.32□□□□□ -1.56
SCARNA15.2-201ENST00000516409 PDXDC2PQ6P474 469 aa5.32□□□□□ -1.56
SCARNA15.2-201ENST00000516409 DNAJC14Q6Y2X3 702 aaPredicted RBP5.32□□□□□ -1.56
SCARNA15.2-201ENST00000516409 OGFOD1Q8N543 542 aa5.32□□□□□ -1.56
SCARNA15.2-201ENST00000516409 NUDT12Q9BQG2 462 aa5.32□□□□□ -1.56
SCARNA15.2-201ENST00000516409 CDCA7Q9BWT1 371 aaPredicted RBP5.32□□□□□ -1.56
SCARNA15.2-201ENST00000516409 PRDM9Q9NQV7 894 aa5.32□□□□□ -1.56
SCARNA15.2-201ENST00000516409 HPS5Q9UPZ3 1129 aa5.32□□□□□ -1.56
SCARNA15.2-201ENST00000516409 SALL2Q9Y467 1007 aaPredicted RBP5.32□□□□□ -1.56
SCARNA15.2-201ENST00000516409 RBM47A0AV96 593 aaKnown RBP5.31□□□□□ -1.56
SCARNA15.2-201ENST00000516409 NR1I2O75469 434 aa5.31□□□□□ -1.56
SCARNA15.2-201ENST00000516409 BCAMP50895 628 aa5.31□□□□□ -1.56
SCARNA15.2-201ENST00000516409 PPP4CP60510 307 aa5.31□□□□□ -1.56
SCARNA15.2-201ENST00000516409 EML3Q32P44 896 aa5.31□□□□□ -1.56
SCARNA15.2-201ENST00000516409 ZNF687Q8N1G0 1237 aa5.31□□□□□ -1.56
SCARNA15.2-201ENST00000516409 ADAM32Q8TC27 787 aa5.31□□□□□ -1.56
SCARNA15.2-201ENST00000516409 GPSM3Q9Y4H4 160 aa5.31□□□□□ -1.56
SCARNA15.2-201ENST00000516409 TK2O00142 265 aa5.3□□□□□ -1.56
SCARNA15.2-201ENST00000516409 DXOO77932 396 aaKnown RBP5.3□□□□□ -1.56
SCARNA15.2-201ENST00000516409 EMP3P54852 163 aa5.3□□□□□ -1.56
SCARNA15.2-201ENST00000516409 TRAF7Q6Q0C0 670 aa5.3□□□□□ -1.56
SCARNA15.2-201ENST00000516409 MARVELD3Q96A59 401 aa5.3□□□□□ -1.56
SCARNA15.2-201ENST00000516409 ARHGAP9Q9BRR9 750 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms