RNA–Protein interactions for RNA: ENST00000514387.6

GPBP1-208, Transcript of GC-rich promoter binding protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GPBP1, Length 3,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPBP1-208ENST00000514387 CFAP44Q96MT7 982 aa10.87□□□□□ -0.67
GPBP1-208ENST00000514387 KNSTRNQ9Y448 316 aa10.87□□□□□ -0.67
GPBP1-208ENST00000514387 REREQ9P2R6 1566 aa10.87□□□□□ -0.67
GPBP1-208ENST00000514387 BCAR3O75815 825 aa10.87□□□□□ -0.67
GPBP1-208ENST00000514387 RNF17Q9BXT8 1623 aaKnown RBP10.87□□□□□ -0.67
GPBP1-208ENST00000514387 CT47B1P0C2W7 299 aaPredicted RBP10.86□□□□□ -0.67
GPBP1-208ENST00000514387 NUP155O75694 1391 aa10.86□□□□□ -0.67
GPBP1-208ENST00000514387 DISP3Q9P2K9 1392 aa10.86□□□□□ -0.67
GPBP1-208ENST00000514387 WDR7Q9Y4E6 1490 aa10.86□□□□□ -0.67
GPBP1-208ENST00000514387 HDAC1Q13547 482 aaPredicted RBP10.86□□□□□ -0.67
GPBP1-208ENST00000514387 TROQ12816 1431 aaPredicted RBP10.86□□□□□ -0.67
GPBP1-208ENST00000514387 IRX5P78411 483 aaPredicted RBP10.85□□□□□ -0.67
GPBP1-208ENST00000514387 NUCB2P80303 420 aa10.85□□□□□ -0.67
GPBP1-208ENST00000514387 SYNJ2O15056 1496 aa10.85□□□□□ -0.67
GPBP1-208ENST00000514387 APPP05067 770 aa10.85□□□□□ -0.67
GPBP1-208ENST00000514387 ANAPC15P60006 121 aa10.85□□□□□ -0.67
GPBP1-208ENST00000514387 DNTTIP2Q5QJE6 756 aaKnown RBP10.85□□□□□ -0.67
GPBP1-208ENST00000514387 COG6Q9Y2V7 657 aa10.85□□□□□ -0.67
GPBP1-208ENST00000514387 HSP90AB3PQ58FF7 597 aa10.84□□□□□ -0.67
GPBP1-208ENST00000514387 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.84□□□□□ -0.67
GPBP1-208ENST00000514387 DDX49Q9Y6V7 483 aaKnown RBP10.84□□□□□ -0.67
GPBP1-208ENST00000514387 TULP2O00295 520 aa10.84□□□□□ -0.67
GPBP1-208ENST00000514387 RAI14Q9P0K7 980 aa10.84□□□□□ -0.67
GPBP1-208ENST00000514387 UHRF1BP1LA0JNW5 1464 aa10.84□□□□□ -0.67
GPBP1-208ENST00000514387 WDR63Q8IWG1 891 aa10.83□□□□□ -0.68
GPBP1-208ENST00000514387 GPATCH8Q9UKJ3 1502 aaKnown RBP10.83□□□□□ -0.68
GPBP1-208ENST00000514387 K7ELQ4 463 aaPredicted RBP10.83□□□□□ -0.68
GPBP1-208ENST00000514387 MFAP1P55081 439 aaKnown RBP10.83□□□□□ -0.68
GPBP1-208ENST00000514387 GPATCH11Q8N954 259 aa10.83□□□□□ -0.68
GPBP1-208ENST00000514387 BSDC1Q9NW68 430 aaPredicted RBP10.83□□□□□ -0.68
GPBP1-208ENST00000514387 PCDHB15Q9Y5E8 787 aa10.83□□□□□ -0.68
GPBP1-208ENST00000514387 MAGI2Q86UL8 1455 aa10.83□□□□□ -0.68
GPBP1-208ENST00000514387 RARSP54136 660 aaKnown RBP10.83□□□□□ -0.68
GPBP1-208ENST00000514387 NBPF9Q3BBW0 867 aa10.83□□□□□ -0.68
GPBP1-208ENST00000514387 SPRYD3Q8NCJ5 442 aa10.83□□□□□ -0.68
GPBP1-208ENST00000514387 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.83□□□□□ -0.68
GPBP1-208ENST00000514387 PBRM1Q86U86 1689 aa10.82□□□□□ -0.68
GPBP1-208ENST00000514387 RAPGEF6Q8TEU7 1601 aa10.82□□□□□ -0.68
GPBP1-208ENST00000514387 KIAA2012Q0VF49 1180 aa10.82□□□□□ -0.68
GPBP1-208ENST00000514387 BAG4O95429 457 aaKnown RBP10.82□□□□□ -0.68
GPBP1-208ENST00000514387 PANK1Q8TE04 598 aa10.82□□□□□ -0.68
GPBP1-208ENST00000514387 EFCC1Q9HA90 598 aa10.82□□□□□ -0.68
GPBP1-208ENST00000514387 ATP10AO60312 1499 aa10.82□□□□□ -0.68
GPBP1-208ENST00000514387 ARHGEF5Q12774 1597 aa10.82□□□□□ -0.68
GPBP1-208ENST00000514387 CCDC27Q2M243 656 aa10.81□□□□□ -0.68
GPBP1-208ENST00000514387 KDM2AQ9Y2K7 1162 aa10.81□□□□□ -0.68
GPBP1-208ENST00000514387 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.81□□□□□ -0.682e-8■■□□□ 12.3
GPBP1-208ENST00000514387 FEZ1Q99689 392 aa10.81□□□□□ -0.68
GPBP1-208ENST00000514387 CWC22Q9HCG8 908 aaKnown RBP10.81□□□□□ -0.68
GPBP1-208ENST00000514387 CFDP1Q9UEE9 299 aaPredicted RBP10.81□□□□□ -0.68
GPBP1-208ENST00000514387 APAF1O14727 1248 aa10.81□□□□□ -0.68
GPBP1-208ENST00000514387 IRF6O14896 467 aa10.81□□□□□ -0.68
GPBP1-208ENST00000514387 MVPQ14764 893 aaKnown RBP10.81□□□□□ -0.68
GPBP1-208ENST00000514387 TSPYL1Q9H0U9 437 aa10.81□□□□□ -0.68
GPBP1-208ENST00000514387 POLR3AO14802 1390 aaPredicted RBP10.81□□□□□ -0.68
GPBP1-208ENST00000514387 A2MP01023 1474 aa10.8□□□□□ -0.68
GPBP1-208ENST00000514387 XPCQ01831 940 aaPredicted RBP10.8□□□□□ -0.68
GPBP1-208ENST00000514387 ZSCAN23Q3MJ62 389 aa10.8□□□□□ -0.68
GPBP1-208ENST00000514387 NBPF10Q6P3W6 841 aaKnown RBP10.8□□□□□ -0.68
GPBP1-208ENST00000514387 SPINK5Q9NQ38 1064 aaPredicted RBP10.8□□□□□ -0.68
GPBP1-208ENST00000514387 IQGAP1P46940 1657 aa10.8□□□□□ -0.68
GPBP1-208ENST00000514387 ZNF644Q9H582 1327 aaPredicted RBP10.8□□□□□ -0.68
GPBP1-208ENST00000514387 NUP153P49790 1475 aaKnown RBP10.8□□□□□ -0.68
GPBP1-208ENST00000514387 PHF23Q9BUL5 403 aaPredicted RBP10.79□□□□□ -0.68
GPBP1-208ENST00000514387 RAD50Q92878 1312 aa10.79□□□□□ -0.68
GPBP1-208ENST00000514387 UVSSAQ2YD98 709 aa10.79□□□□□ -0.68
GPBP1-208ENST00000514387 LRSAM1Q6UWE0 723 aa10.79□□□□□ -0.68
GPBP1-208ENST00000514387 C9orf84Q5VXU9 1444 aa10.79□□□□□ -0.68
GPBP1-208ENST00000514387 GABPB1Q06547 395 aaPredicted RBP10.79□□□□□ -0.68
GPBP1-208ENST00000514387 MBD3O95983 291 aa10.78□□□□□ -0.68
GPBP1-208ENST00000514387 SATB1Q01826 763 aa10.78□□□□□ -0.68
GPBP1-208ENST00000514387 SYCP1Q15431 976 aa10.78□□□□□ -0.68
GPBP1-208ENST00000514387 CREBRFQ8IUR6 639 aa10.78□□□□□ -0.68
GPBP1-208ENST00000514387 PDCL2Q8N4E4 241 aa10.78□□□□□ -0.68
GPBP1-208ENST00000514387 BMP2KLQ5H9B9 411 aa10.78□□□□□ -0.68
GPBP1-208ENST00000514387 CDC42BPAQ5VT25 1732 aa10.77□□□□□ -0.68
GPBP1-208ENST00000514387 UNC13BO14795 1591 aa10.77□□□□□ -0.69
GPBP1-208ENST00000514387 CYP2E1P05181 493 aaPredicted RBP10.77□□□□□ -0.69
GPBP1-208ENST00000514387 MKL1Q969V6 931 aa10.77□□□□□ -0.69
GPBP1-208ENST00000514387 RBSNQ9H1K0 784 aa10.77□□□□□ -0.69
GPBP1-208ENST00000514387 DDX19BQ9UMR2 479 aa10.77□□□□□ -0.69
GPBP1-208ENST00000514387 ZKSCAN2Q63HK3 967 aa10.77□□□□□ -0.69
GPBP1-208ENST00000514387 OTUD6BQ8N6M0 293 aa10.77□□□□□ -0.69
GPBP1-208ENST00000514387 LMBRD1Q9NUN5 540 aa10.77□□□□□ -0.69
GPBP1-208ENST00000514387 KIF3AQ9Y496 699 aa10.77□□□□□ -0.69
GPBP1-208ENST00000514387 KIAA0556O60303 1618 aa10.77□□□□□ -0.69
GPBP1-208ENST00000514387 MYO5CQ9NQX4 1742 aa10.76□□□□□ -0.69
GPBP1-208ENST00000514387 FAM184AQ8NB25 1140 aa10.76□□□□□ -0.69
GPBP1-208ENST00000514387 PIBF1Q8WXW3 757 aa10.76□□□□□ -0.69
GPBP1-208ENST00000514387 SCAF11Q99590 1463 aaKnown RBP10.76□□□□□ -0.69
GPBP1-208ENST00000514387 TPM3P06753 285 aa10.76□□□□□ -0.69
GPBP1-208ENST00000514387 DIAPH3Q9NSV4 1193 aa10.76□□□□□ -0.69
GPBP1-208ENST00000514387 ADGRL1O94910 1474 aa10.76□□□□□ -0.69
GPBP1-208ENST00000514387 IQSEC2Q5JU85 1478 aa10.76□□□□□ -0.69
GPBP1-208ENST00000514387 CFAP74Q9C0B2 1584 aa10.76□□□□□ -0.69
GPBP1-208ENST00000514387 RABEP1Q15276 862 aa10.75□□□□□ -0.69
GPBP1-208ENST00000514387 SSFA2P28290 1259 aa10.75□□□□□ -0.69
GPBP1-208ENST00000514387 OS9Q13438 667 aaPredicted RBP10.75□□□□□ -0.69
GPBP1-208ENST00000514387 SPTLC3Q9NUV7 552 aa10.75□□□□□ -0.69
GPBP1-208ENST00000514387 DZIP1LQ8IYY4 767 aaKnown RBP10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms