RNA–Protein interactions for RNA: ENST00000505625.5

MATR3-211, Transcript of matrin 3, humanhuman

TSL 1 (best)

Gene MATR3, Length 7,306 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-211ENST00000505625 ANKRD45Q5TZF3 282 aa6.24□□□□□ -1.41
MATR3-211ENST00000505625 ANKLE2Q86XL3 938 aa6.24□□□□□ -1.41
MATR3-211ENST00000505625 CSPP1Q1MSJ5 1256 aa6.24□□□□□ -1.41
MATR3-211ENST00000505625 TANGO6Q9C0B7 1094 aa6.24□□□□□ -1.41
MATR3-211ENST00000505625 RAI14Q9P0K7 980 aa6.24□□□□□ -1.41
MATR3-211ENST00000505625 CUX2O14529 1486 aa6.24□□□□□ -1.41
MATR3-211ENST00000505625 GOLGA6L19H0YKK7 550 aa6.23□□□□□ -1.41
MATR3-211ENST00000505625 ST5P78524 1137 aa6.23□□□□□ -1.41
MATR3-211ENST00000505625 SEPT7Q16181 437 aaKnown RBP6.23□□□□□ -1.41
MATR3-211ENST00000505625 KMT5BQ4FZB7 885 aa6.23□□□□□ -1.41
MATR3-211ENST00000505625 SIRT1Q96EB6 747 aa6.23□□□□□ -1.41
MATR3-211ENST00000505625 VEZTQ9HBM0 779 aa6.23□□□□□ -1.41
MATR3-211ENST00000505625 TFCP2L1Q9NZI6 479 aa6.23□□□□□ -1.41
MATR3-211ENST00000505625 CCDC96Q2M329 555 aa6.23□□□□□ -1.41
MATR3-211ENST00000505625 PDILTQ8N807 584 aa6.23□□□□□ -1.41
MATR3-211ENST00000505625 KIF3AQ9Y496 699 aa6.23□□□□□ -1.41
MATR3-211ENST00000505625 DNAI2Q9GZS0 605 aa6.23□□□□□ -1.41
MATR3-211ENST00000505625 NOD1Q9Y239 953 aa6.23□□□□□ -1.41
MATR3-211ENST00000505625 TOM1O60784 492 aa6.23□□□□□ -1.41
MATR3-211ENST00000505625 MICALL1Q8N3F8 863 aa6.23□□□□□ -1.41
MATR3-211ENST00000505625 DNAJC5BQ9UF47 199 aa6.23□□□□□ -1.41
MATR3-211ENST00000505625 ABT1Q9ULW3 272 aaKnown RBP6.23□□□□□ -1.41
MATR3-211ENST00000505625 NUP155O75694 1391 aa6.23□□□□□ -1.41
MATR3-211ENST00000505625 CC2D2AQ9P2K1 1620 aa6.22□□□□□ -1.41
MATR3-211ENST00000505625 PTCD1O75127 700 aaKnown RBP6.22□□□□□ -1.41
MATR3-211ENST00000505625 TNIP1Q15025 636 aa6.22□□□□□ -1.41
MATR3-211ENST00000505625 PRKAG2Q9UGJ0 569 aa6.22□□□□□ -1.41
MATR3-211ENST00000505625 KIF20AO95235 890 aa6.22□□□□□ -1.41
MATR3-211ENST00000505625 IPO7O95373 1038 aaKnown RBP6.22□□□□□ -1.41
MATR3-211ENST00000505625 DPH6Q7L8W6 267 aa6.22□□□□□ -1.41
MATR3-211ENST00000505625 XBP1P17861 261 aa6.22□□□□□ -1.41
MATR3-211ENST00000505625 CNGA1P29973 690 aa6.22□□□□□ -1.41
MATR3-211ENST00000505625 CKAP2LQ8IYA6 745 aa6.22□□□□□ -1.41
MATR3-211ENST00000505625 MROH2BQ7Z745 1585 aa6.22□□□□□ -1.41
MATR3-211ENST00000505625 ST20-MTHFSA0A0A6YYL1 179 aa6.22□□□□□ -1.41
MATR3-211ENST00000505625 MTHFSP49914 203 aa6.22□□□□□ -1.41
MATR3-211ENST00000505625 FKBP4Q02790 459 aaKnown RBP eCLIP6.22□□□□□ -1.41
MATR3-211ENST00000505625 ABCF2Q9UG63 623 aa6.22□□□□□ -1.41
MATR3-211ENST00000505625 FERMT2Q96AC1 680 aa6.22□□□□□ -1.41
MATR3-211ENST00000505625 HOOK1Q9UJC3 728 aaKnown RBP6.22□□□□□ -1.41
MATR3-211ENST00000505625 SOGA3Q5TF21 947 aa6.22□□□□□ -1.41
MATR3-211ENST00000505625 ZBTB24O43167 697 aaPredicted RBP6.21□□□□□ -1.41
MATR3-211ENST00000505625 MAP4K4O95819 1239 aaPredicted RBP6.21□□□□□ -1.41
MATR3-211ENST00000505625 ARL1P40616 181 aaPredicted RBP6.21□□□□□ -1.41
MATR3-211ENST00000505625 FAM161AQ3B820 660 aa6.21□□□□□ -1.41
MATR3-211ENST00000505625 ARHGAP27Q6ZUM4 889 aa6.21□□□□□ -1.41
MATR3-211ENST00000505625 MAP10Q9P2G4 905 aa6.21□□□□□ -1.41
MATR3-211ENST00000505625 SAMM50Q9Y512 469 aa6.21□□□□□ -1.41
MATR3-211ENST00000505625 SETQ01105 290 aaPredicted RBP6.21□□□□□ -1.42
MATR3-211ENST00000505625 SLC26A8Q96RN1 970 aa6.21□□□□□ -1.42
MATR3-211ENST00000505625 LRP2BPQ9P2M1 347 aa6.21□□□□□ -1.42
MATR3-211ENST00000505625 ZNF652Q9Y2D9 606 aa6.21□□□□□ -1.42
MATR3-211ENST00000505625 TTC30BQ8N4P2 665 aa6.21□□□□□ -1.42
MATR3-211ENST00000505625 CAGE1Q8TC20 777 aa6.21□□□□□ -1.42
MATR3-211ENST00000505625 TMOD3Q9NYL9 352 aa6.21□□□□□ -1.42
MATR3-211ENST00000505625 LMTK3Q96Q04 1460 aa6.21□□□□□ -1.42
MATR3-211ENST00000505625 KTN1Q86UP2 1357 aaKnown RBP6.21□□□□□ -1.42
MATR3-211ENST00000505625 CCDC181Q5TID7 509 aa6.21□□□□□ -1.42
MATR3-211ENST00000505625 IGHMBP2P38935 993 aaKnown RBP6.2□□□□□ -1.42
MATR3-211ENST00000505625 CABP2Q9NPB3 220 aa6.2□□□□□ -1.42
MATR3-211ENST00000505625 SOGA1O94964 1423 aa6.2□□□□□ -1.42
MATR3-211ENST00000505625 EVC2Q86UK5 1308 aa6.2□□□□□ -1.42
MATR3-211ENST00000505625 CEP164Q9UPV0 1460 aa6.2□□□□□ -1.42
MATR3-211ENST00000505625 BECN2A8MW95 431 aa6.2□□□□□ -1.42
MATR3-211ENST00000505625 PLCD4Q9BRC7 762 aa6.2□□□□□ -1.42
MATR3-211ENST00000505625 UBA5Q9GZZ9 404 aa6.2□□□□□ -1.42
MATR3-211ENST00000505625 SSX2IPQ9Y2D8 614 aa6.2□□□□□ -1.42
MATR3-211ENST00000505625 PARP3Q9Y6F1 533 aa6.2□□□□□ -1.42
MATR3-211ENST00000505625 ENOX2Q16206 610 aaKnown RBP6.2□□□□□ -1.42
MATR3-211ENST00000505625 DZIP1Q86YF9 867 aaKnown RBP6.2□□□□□ -1.42
MATR3-211ENST00000505625 SYAP1Q96A49 352 aaPredicted RBP6.2□□□□□ -1.42
MATR3-211ENST00000505625 SPG7Q9UQ90 795 aa6.2□□□□□ -1.42
MATR3-211ENST00000505625 MYO15BQ96JP2 1530 aa6.2□□□□□ -1.42
MATR3-211ENST00000505625 PDS5BQ9NTI5 1447 aa6.2□□□□□ -1.42
MATR3-211ENST00000505625 DMRT2Q9Y5R5 561 aa6.2□□□□□ -1.42
MATR3-211ENST00000505625 DISP3Q9P2K9 1392 aa6.2□□□□□ -1.42
MATR3-211ENST00000505625 SH3BP5O60239 455 aa6.2□□□□□ -1.42
MATR3-211ENST00000505625 PPP4R4Q6NUP7 873 aa6.2□□□□□ -1.42
MATR3-211ENST00000505625 MPHOSPH6Q99547 160 aaKnown RBP6.2□□□□□ -1.42
MATR3-211ENST00000505625 MAGEC2Q9UBF1 373 aaPredicted RBP6.2□□□□□ -1.42
MATR3-211ENST00000505625 RIMBP2O15034 1052 aa6.19□□□□□ -1.42
MATR3-211ENST00000505625 CCDC158Q5M9N0 1113 aa6.19□□□□□ -1.42
MATR3-211ENST00000505625 FAM212AQ96EL1 285 aa6.19□□□□□ -1.42
MATR3-211ENST00000505625 BAZ1AQ9NRL2 1556 aaPredicted RBP6.19□□□□□ -1.42
MATR3-211ENST00000505625 CCDC69A6NI79 296 aa6.19□□□□□ -1.42
MATR3-211ENST00000505625 TRIM22Q8IYM9 498 aa6.19□□□□□ -1.42
MATR3-211ENST00000505625 ZRANB1Q9UGI0 708 aa6.19□□□□□ -1.42
MATR3-211ENST00000505625 PTMSP20962 102 aa6.19□□□□□ -1.42
MATR3-211ENST00000505625 CCDC57Q2TAC2 916 aa6.19□□□□□ -1.42
MATR3-211ENST00000505625 CCDC150Q8NCX0 1101 aa6.19□□□□□ -1.42
MATR3-211ENST00000505625 PUF60Q9UHX1 559 aaKnown RBP6.19□□□□□ -1.42
MATR3-211ENST00000505625 TDO2P48775 406 aa6.19□□□□□ -1.42
MATR3-211ENST00000505625 KIF22Q14807 665 aa6.19□□□□□ -1.42
MATR3-211ENST00000505625 RUFY1Q96T51 708 aa6.19□□□□□ -1.42
MATR3-211ENST00000505625 NUCB2P80303 420 aa6.19□□□□□ -1.42
MATR3-211ENST00000505625 CCDC88BA6NC98 1476 aa6.19□□□□□ -1.42
MATR3-211ENST00000505625 KIF27Q86VH2 1401 aa6.18□□□□□ -1.42
MATR3-211ENST00000505625 BICD2Q8TD16 824 aa6.18□□□□□ -1.42
MATR3-211ENST00000505625 CCDC173Q0VFZ6 552 aa6.18□□□□□ -1.42
MATR3-211ENST00000505625 NESP48681 1621 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms