RNA–Protein interactions for RNA: ENST00000504541.1

COL4A5-207, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 5

Gene COL4A5, Length 859 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-207ENST00000504541 WDR62O43379 1518 aa9.76□□□□□ -0.85
COL4A5-207ENST00000504541 ABCA10Q8WWZ4 1543 aa9.76□□□□□ -0.85
COL4A5-207ENST00000504541 AP1G2O75843 785 aa9.75□□□□□ -0.85
COL4A5-207ENST00000504541 RFC5P40937 340 aa9.75□□□□□ -0.85
COL4A5-207ENST00000504541 PPP2R2DQ66LE6 453 aa9.75□□□□□ -0.85
COL4A5-207ENST00000504541 SLC6A16Q9GZN6 736 aa9.75□□□□□ -0.85
COL4A5-207ENST00000504541 TMEM259Q4ZIN3 620 aa9.74□□□□□ -0.85
COL4A5-207ENST00000504541 HELBQ8NG08 1087 aaPredicted RBP9.74□□□□□ -0.85
COL4A5-207ENST00000504541 GTF3C3Q9Y5Q9 886 aa9.74□□□□□ -0.85
COL4A5-207ENST00000504541 IGF1RP08069 1367 aa9.74□□□□□ -0.85
COL4A5-207ENST00000504541 GGCXP38435 758 aa9.73□□□□□ -0.85
COL4A5-207ENST00000504541 FAM160A2Q8N612 972 aaPredicted RBP9.73□□□□□ -0.85
COL4A5-207ENST00000504541 KIF21AQ7Z4S6 1674 aa9.73□□□□□ -0.85
COL4A5-207ENST00000504541 IFT140Q96RY7 1462 aa9.72□□□□□ -0.85
COL4A5-207ENST00000504541 LCE2AQ5TA79 106 aaPredicted RBP9.72□□□□□ -0.85
COL4A5-207ENST00000504541 PPP1R18Q6NYC8 613 aa9.72□□□□□ -0.85
COL4A5-207ENST00000504541 FAM9AQ8IZU1 332 aaPredicted RBP9.72□□□□□ -0.85
COL4A5-207ENST00000504541 CFAP99D6REC4 459 aa9.71□□□□□ -0.86
COL4A5-207ENST00000504541 MSS51Q4VC12 460 aa9.71□□□□□ -0.86
COL4A5-207ENST00000504541 CUX2O14529 1486 aa9.71□□□□□ -0.86
COL4A5-207ENST00000504541 FBXO31Q5XUX0 539 aaPredicted RBP9.7□□□□□ -0.86
COL4A5-207ENST00000504541 S1PR4O95977 384 aa9.69□□□□□ -0.86
COL4A5-207ENST00000504541 JUNDP17535 347 aa9.69□□□□□ -0.86
COL4A5-207ENST00000504541 CTDSPL2Q05D32 466 aa9.69□□□□□ -0.86
COL4A5-207ENST00000504541 RUSC2Q8N2Y8 1516 aa9.69□□□□□ -0.86
COL4A5-207ENST00000504541 CCDC24Q8N4L8 307 aa9.69□□□□□ -0.86
COL4A5-207ENST00000504541 RAD54L2Q9Y4B4 1467 aa9.69□□□□□ -0.86
COL4A5-207ENST00000504541 WDR97A6NE52 1622 aa9.68□□□□□ -0.86
COL4A5-207ENST00000504541 LOC100996750A0A140TA64 210 aa9.68□□□□□ -0.86
COL4A5-207ENST00000504541 LOC105371045A0A1W2PR82 267 aa9.68□□□□□ -0.86
COL4A5-207ENST00000504541 POTECB2RU33 542 aa9.68□□□□□ -0.86
COL4A5-207ENST00000504541 DESI1Q6ICB0 168 aa9.68□□□□□ -0.86
COL4A5-207ENST00000504541 KRTAP4-6Q9BYQ5 205 aa9.68□□□□□ -0.86
COL4A5-207ENST00000504541 THOC2Q8NI27 1593 aaKnown RBP9.67□□□□□ -0.86
COL4A5-207ENST00000504541 PRXQ9BXM0 1461 aa9.67□□□□□ -0.86
COL4A5-207ENST00000504541 TREML4Q6UXN2 200 aa9.67□□□□□ -0.86
COL4A5-207ENST00000504541 PRDM9Q9NQV7 894 aa9.67□□□□□ -0.86
COL4A5-207ENST00000504541 CARMIL1Q5VZK9 1371 aa9.66□□□□□ -0.86
COL4A5-207ENST00000504541 TDRD9Q8NDG6 1382 aaKnown RBP9.66□□□□□ -0.86
COL4A5-207ENST00000504541 LYPD8Q6UX82 237 aa9.66□□□□□ -0.86
COL4A5-207ENST00000504541 BANK1Q8NDB2 785 aa9.66□□□□□ -0.86
COL4A5-207ENST00000504541 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.66□□□□□ -0.86
COL4A5-207ENST00000504541 TNIKQ9UKE5 1360 aa9.65□□□□□ -0.86
COL4A5-207ENST00000504541 TARBP1Q13395 1621 aaKnown RBP9.65□□□□□ -0.86
COL4A5-207ENST00000504541 DXOO77932 396 aaKnown RBP9.65□□□□□ -0.86
COL4A5-207ENST00000504541 CTHP32929 405 aa9.65□□□□□ -0.86
COL4A5-207ENST00000504541 MMP16P51512 607 aa9.65□□□□□ -0.86
COL4A5-207ENST00000504541 GAPVD1Q14C86 1478 aa9.65□□□□□ -0.87
COL4A5-207ENST00000504541 PPEF1O14829 653 aaPredicted RBP9.64□□□□□ -0.87
COL4A5-207ENST00000504541 USP17L8P0C7I0 530 aa9.64□□□□□ -0.87
COL4A5-207ENST00000504541 NUDT12Q9BQG2 462 aa9.64□□□□□ -0.87
COL4A5-207ENST00000504541 ERICH3Q5RHP9 1530 aa9.64□□□□□ -0.87
COL4A5-207ENST00000504541 PER1O15534 1290 aaPredicted RBP9.63□□□□□ -0.87
COL4A5-207ENST00000504541 FLIIQ13045 1269 aa9.63□□□□□ -0.87
COL4A5-207ENST00000504541 PTPRNQ16849 979 aa9.63□□□□□ -0.87
COL4A5-207ENST00000504541 GOLGA3Q08378 1498 aa9.62□□□□□ -0.87
COL4A5-207ENST00000504541 GRIN2BQ13224 1484 aa9.62□□□□□ -0.87
COL4A5-207ENST00000504541 RNF223E7ERA6 249 aa9.62□□□□□ -0.87
COL4A5-207ENST00000504541 MYT1Q01538 1121 aa9.62□□□□□ -0.87
COL4A5-207ENST00000504541 LRRN4Q8WUT4 740 aa9.62□□□□□ -0.87
COL4A5-207ENST00000504541 SNRKQ9NRH2 765 aa9.62□□□□□ -0.87
COL4A5-207ENST00000504541 FCF1Q9Y324 198 aaKnown RBP9.62□□□□□ -0.87
COL4A5-207ENST00000504541 RAPGEF2Q9Y4G8 1499 aa9.61□□□□□ -0.87
COL4A5-207ENST00000504541 KIF21BO75037 1637 aa9.61□□□□□ -0.87
COL4A5-207ENST00000504541 ZBTB24O43167 697 aaPredicted RBP9.61□□□□□ -0.87
COL4A5-207ENST00000504541 CCNYL3P0C7X3 344 aa9.61□□□□□ -0.87
COL4A5-207ENST00000504541 UBTFP17480 764 aaKnown RBP9.61□□□□□ -0.87
COL4A5-207ENST00000504541 AQRO60306 1485 aaKnown RBP eCLIP9.6□□□□□ -0.87
COL4A5-207ENST00000504541 APBB1O00213 710 aa9.6□□□□□ -0.87
COL4A5-207ENST00000504541 ANKLE1Q8NAG6 615 aa9.6□□□□□ -0.87
COL4A5-207ENST00000504541 PRM3Q9NNZ6 103 aa9.6□□□□□ -0.87
COL4A5-207ENST00000504541 EVA1BQ9NVM1 165 aa9.6□□□□□ -0.87
COL4A5-207ENST00000504541 FHAD1B1AJZ9 1412 aa9.59□□□□□ -0.87
COL4A5-207ENST00000504541 TRIM67Q6ZTA4 783 aa9.59□□□□□ -0.87
COL4A5-207ENST00000504541 ABCA5Q8WWZ7 1642 aa9.59□□□□□ -0.87
COL4A5-207ENST00000504541 KCNH2Q12809 1159 aa9.58□□□□□ -0.88
COL4A5-207ENST00000504541 NR6A1Q15406 480 aa9.57□□□□□ -0.88
COL4A5-207ENST00000504541 PNMA1Q8ND90 353 aa9.57□□□□□ -0.88
COL4A5-207ENST00000504541 ZNF608Q9ULD9 1512 aaPredicted RBP9.56□□□□□ -0.88
COL4A5-207ENST00000504541 MAP10Q9P2G4 905 aa9.56□□□□□ -0.88
COL4A5-207ENST00000504541 STK17AQ9UEE5 414 aa9.56□□□□□ -0.88
COL4A5-207ENST00000504541 CUL7Q14999 1698 aa9.55□□□□□ -0.88
COL4A5-207ENST00000504541 MAGI1Q96QZ7 1491 aaPredicted RBP9.55□□□□□ -0.88
COL4A5-207ENST00000504541 RAD21O60216 631 aa9.55□□□□□ -0.88
COL4A5-207ENST00000504541 DGAT1O75907 488 aa9.55□□□□□ -0.88
COL4A5-207ENST00000504541 PKDCCQ504Y2 493 aa9.55□□□□□ -0.88
COL4A5-207ENST00000504541 HMX1Q9NP08 348 aaPredicted RBP9.55□□□□□ -0.88
COL4A5-207ENST00000504541 CD2BP2O95400 341 aaKnown RBP9.54□□□□□ -0.88
COL4A5-207ENST00000504541 MCM6Q14566 821 aa9.54□□□□□ -0.88
COL4A5-207ENST00000504541 PTCRAQ6ISU1 281 aaPredicted RBP9.54□□□□□ -0.88
COL4A5-207ENST00000504541 ARMC2Q8NEN0 867 aa9.54□□□□□ -0.88
COL4A5-207ENST00000504541 F12P00748 615 aaPredicted RBP9.53□□□□□ -0.88
COL4A5-207ENST00000504541 MTMR14Q8NCE2 650 aa9.53□□□□□ -0.88
COL4A5-207ENST00000504541 CHMP7Q8WUX9 453 aaPredicted RBP9.53□□□□□ -0.88
COL4A5-207ENST00000504541 SLC19A1P41440 591 aa9.52□□□□□ -0.89
COL4A5-207ENST00000504541 EPS8L1Q8TE68 723 aa9.52□□□□□ -0.89
COL4A5-207ENST00000504541 UNC93B1Q9H1C4 597 aa9.52□□□□□ -0.89
COL4A5-207ENST00000504541 C14orf37Q86TY3 774 aa9.51□□□□□ -0.89
COL4A5-207ENST00000504541 NDUFB9Q9Y6M9 179 aa9.51□□□□□ -0.89
COL4A5-207ENST00000504541 SYNJ2O15056 1496 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms