RNA–Protein interactions for RNA: ENST00000502820.1

HTT-202, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 287 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-202ENST00000502820 ADGRB2O60241 1585 aa7.62□□□□□ -1.19
HTT-202ENST00000502820 RGPD1P0DJD0 1748 aa7.61□□□□□ -1.19
HTT-202ENST00000502820 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.61□□□□□ -1.19
HTT-202ENST00000502820 SPATA31A1Q5TZJ5 1347 aa7.61□□□□□ -1.19
HTT-202ENST00000502820 PTGER2P43116 358 aa7.61□□□□□ -1.19
HTT-202ENST00000502820 ARXQ96QS3 562 aa7.61□□□□□ -1.19
HTT-202ENST00000502820 LAMC1P11047 1609 aa7.6□□□□□ -1.19
HTT-202ENST00000502820 UTRNP46939 3433 aa7.6□□□□□ -1.19
HTT-202ENST00000502820 NGDNQ8NEJ9 315 aaKnown RBP7.6□□□□□ -1.19
HTT-202ENST00000502820 MARF1Q9Y4F3 1742 aaKnown RBP7.6□□□□□ -1.19
HTT-202ENST00000502820 E9PCH4 1651 aa7.6□□□□□ -1.19
HTT-202ENST00000502820 RRBP1Q9P2E9 1410 aaKnown RBP7.6□□□□□ -1.19
HTT-202ENST00000502820 NRKQ7Z2Y5 1582 aa7.59□□□□□ -1.19
HTT-202ENST00000502820 LARP1Q6PKG0 1096 aaKnown RBP7.59□□□□□ -1.19
HTT-202ENST00000502820 HIRIP3Q9BW71 556 aaPredicted RBP7.59□□□□□ -1.19
HTT-202ENST00000502820 GPBP1L1Q9HC44 474 aaPredicted RBP7.59□□□□□ -1.19
HTT-202ENST00000502820 POGKQ9P215 609 aa7.59□□□□□ -1.19
HTT-202ENST00000502820 TECPR2O15040 1411 aa7.59□□□□□ -1.19
HTT-202ENST00000502820 SBNO1A3KN83 1393 aa7.59□□□□□ -1.2
HTT-202ENST00000502820 GPRASP1Q5JY77 1395 aa7.59□□□□□ -1.2
HTT-202ENST00000502820 KIAA0232Q92628 1395 aa7.59□□□□□ -1.2
HTT-202ENST00000502820 PLCH1Q4KWH8 1693 aa7.58□□□□□ -1.2
HTT-202ENST00000502820 CENPBP07199 599 aaPredicted RBP7.58□□□□□ -1.2
HTT-202ENST00000502820 HSPA6P17066 643 aa7.58□□□□□ -1.2
HTT-202ENST00000502820 PTF1AQ7RTS3 328 aa7.58□□□□□ -1.2
HTT-202ENST00000502820 TCP11L2Q8N4U5 519 aa7.58□□□□□ -1.2
HTT-202ENST00000502820 MTFR1LQ9H019 292 aa7.58□□□□□ -1.2
HTT-202ENST00000502820 NEXMIFQ5QGS0 1516 aa7.57□□□□□ -1.2
HTT-202ENST00000502820 ADGRF5Q8IZF2 1346 aa7.57□□□□□ -1.2
HTT-202ENST00000502820 PPARGC1BQ86YN6 1023 aaKnown RBP7.57□□□□□ -1.2
HTT-202ENST00000502820 PRAM1Q96QH2 718 aa7.57□□□□□ -1.2
HTT-202ENST00000502820 CDC42BPGQ6DT37 1551 aa7.57□□□□□ -1.2
HTT-202ENST00000502820 SLC15A2Q16348 729 aa7.56□□□□□ -1.2
HTT-202ENST00000502820 RPGRIP1LQ68CZ1 1315 aa7.55□□□□□ -1.2
HTT-202ENST00000502820 TXNRD1Q16881 649 aa7.55□□□□□ -1.2
HTT-202ENST00000502820 BARGINQ6ZT62 677 aa7.55□□□□□ -1.2
HTT-202ENST00000502820 WWC3Q9ULE0 1092 aa7.55□□□□□ -1.2
HTT-202ENST00000502820 IQGAP3Q86VI3 1631 aa7.55□□□□□ -1.2
HTT-202ENST00000502820 TNS1Q9HBL0 1735 aaKnown RBP7.55□□□□□ -1.2
HTT-202ENST00000502820 MINK1Q8N4C8 1332 aaPredicted RBP7.54□□□□□ -1.2
HTT-202ENST00000502820 ACIN1Q9UKV3 1341 aaKnown RBP7.54□□□□□ -1.2
HTT-202ENST00000502820 PLSCR1O15162 318 aa7.54□□□□□ -1.2
HTT-202ENST00000502820 MSH5O43196 834 aa7.54□□□□□ -1.2
HTT-202ENST00000502820 POLD1P28340 1107 aa7.54□□□□□ -1.2
HTT-202ENST00000502820 DDB1Q16531 1140 aa7.54□□□□□ -1.2
HTT-202ENST00000502820 COL13A1Q5TAT6 717 aaPredicted RBP7.54□□□□□ -1.2
HTT-202ENST00000502820 TNS4Q8IZW8 715 aa7.54□□□□□ -1.2
HTT-202ENST00000502820 PROM2Q8N271 834 aa7.54□□□□□ -1.2
HTT-202ENST00000502820 CEP350Q5VT06 3117 aa7.54□□□□□ -1.2
HTT-202ENST00000502820 MYOM1P52179 1685 aa7.54□□□□□ -1.2
HTT-202ENST00000502820 CLSPNQ9HAW4 1339 aa7.53□□□□□ -1.2
HTT-202ENST00000502820 NWD2Q9ULI1 1742 aa7.53□□□□□ -1.2
HTT-202ENST00000502820 TOM1L2Q6ZVM7 507 aa7.53□□□□□ -1.2
HTT-202ENST00000502820 NLGN2Q8NFZ4 835 aa7.53□□□□□ -1.2
HTT-202ENST00000502820 SLC4A1APQ9BWU0 796 aaKnown RBP7.53□□□□□ -1.2
HTT-202ENST00000502820 DLC1Q96QB1 1528 aa7.52□□□□□ -1.2
HTT-202ENST00000502820 NRXN1Q9ULB1 1477 aa7.52□□□□□ -1.21
HTT-202ENST00000502820 GRIN3BO60391 1043 aa7.52□□□□□ -1.21
HTT-202ENST00000502820 ACSBG1Q96GR2 724 aa7.52□□□□□ -1.21
HTT-202ENST00000502820 TRAK1Q9UPV9 953 aa7.52□□□□□ -1.21
HTT-202ENST00000502820 NUP188Q5SRE5 1749 aa7.52□□□□□ -1.21
HTT-202ENST00000502820 CLTCL1P53675 1640 aa7.52□□□□□ -1.21
HTT-202ENST00000502820 SSH2Q76I76 1423 aa7.52□□□□□ -1.21
HTT-202ENST00000502820 ATP10DQ9P241 1426 aa7.52□□□□□ -1.21
HTT-202ENST00000502820 ABCC11Q96J66 1382 aa7.51□□□□□ -1.21
HTT-202ENST00000502820 C11orf95C9JLR9 678 aaPredicted RBP7.51□□□□□ -1.21
HTT-202ENST00000502820 CSB-PGBD3P0DP91 1061 aa7.51□□□□□ -1.21
HTT-202ENST00000502820 YBX3P16989 372 aaKnown RBP eCLIP7.51□□□□□ -1.21
HTT-202ENST00000502820 CFAP70Q5T0N1 1121 aa7.51□□□□□ -1.21
HTT-202ENST00000502820 ABTB2Q8N961 1025 aa7.51□□□□□ -1.21
HTT-202ENST00000502820 OVOS2A0A0G2JMS6 1433 aa7.51□□□□□ -1.21
HTT-202ENST00000502820 OVOS2A0A0J9YW53 1432 aa7.51□□□□□ -1.21
HTT-202ENST00000502820 OVOS2Q6IE36 1432 aa7.51□□□□□ -1.21
HTT-202ENST00000502820 COL14A1Q05707 1796 aaKnown RBP7.51□□□□□ -1.21
HTT-202ENST00000502820 KIF1AQ12756 1690 aa7.51□□□□□ -1.21
HTT-202ENST00000502820 THSD7AQ9UPZ6 1657 aa7.51□□□□□ -1.21
HTT-202ENST00000502820 THRAP3Q9Y2W1 955 aaKnown RBP7.5□□□□□ -1.21
HTT-202ENST00000502820 YTHDC2Q9H6S0 1430 aaKnown RBP7.5□□□□□ -1.21
HTT-202ENST00000502820 NRAPQ86VF7 1730 aa7.49□□□□□ -1.21
HTT-202ENST00000502820 DHX57Q6P158 1386 aaKnown RBP7.49□□□□□ -1.21
HTT-202ENST00000502820 SOX12O15370 315 aa7.49□□□□□ -1.21
HTT-202ENST00000502820 APLP1P51693 650 aa7.49□□□□□ -1.21
HTT-202ENST00000502820 HTRA3P83110 453 aa7.49□□□□□ -1.21
HTT-202ENST00000502820 MARCH10Q8NA82 808 aaPredicted RBP7.49□□□□□ -1.21
HTT-202ENST00000502820 SGIP1Q9BQI5 828 aa7.49□□□□□ -1.21
HTT-202ENST00000502820 RREB1Q92766 1687 aa7.48□□□□□ -1.21
HTT-202ENST00000502820 TFCP2L1Q9NZI6 479 aa7.48□□□□□ -1.21
HTT-202ENST00000502820 FMN2Q9NZ56 1722 aa7.47□□□□□ -1.21
HTT-202ENST00000502820 PRAG1Q86YV5 1406 aa7.47□□□□□ -1.21
HTT-202ENST00000502820 EXOC5O00471 708 aa7.47□□□□□ -1.21
HTT-202ENST00000502820 PRELPP51888 382 aa7.47□□□□□ -1.21
HTT-202ENST00000502820 KCNQ4P56696 695 aa7.47□□□□□ -1.21
HTT-202ENST00000502820 ZNF827Q17R98 1081 aa7.47□□□□□ -1.21
HTT-202ENST00000502820 MSL1Q68DK7 614 aa7.47□□□□□ -1.21
HTT-202ENST00000502820 PRR36Q9H6K5 1346 aa7.47□□□□□ -1.21
HTT-202ENST00000502820 WASLO00401 505 aaPredicted RBP7.46□□□□□ -1.22
HTT-202ENST00000502820 SIRT1Q96EB6 747 aa7.46□□□□□ -1.22
HTT-202ENST00000502820 ABCA3Q99758 1704 aa7.46□□□□□ -1.22
HTT-202ENST00000502820 GCP02774 474 aa7.45□□□□□ -1.22
HTT-202ENST00000502820 NLRP13Q86W25 1043 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms