RNA–Protein interactions for RNA: ENST00000493590.1

NECAB3-214, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

TSL 5

Gene NECAB3, Length 625 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-214ENST00000493590 PRDM11Q9NQV5 511 aa24.91■■□□□ 1.58
NECAB3-214ENST00000493590 PPP1R1BQ9UD71 204 aaPredicted RBP24.91■■□□□ 1.58
NECAB3-214ENST00000493590 FAM196AQ6ZSG2 479 aa24.9■■□□□ 1.58
NECAB3-214ENST00000493590 GPRASP1Q5JY77 1395 aa24.9■■□□□ 1.58
NECAB3-214ENST00000493590 DHX57Q6P158 1386 aaKnown RBP24.9■■□□□ 1.58
NECAB3-214ENST00000493590 ANKARQ7Z5J8 1434 aa24.89■■□□□ 1.58
NECAB3-214ENST00000493590 POGKQ9P215 609 aa24.89■■□□□ 1.58
NECAB3-214ENST00000493590 NUP188Q5SRE5 1749 aa24.89■■□□□ 1.57
NECAB3-214ENST00000493590 RREB1Q92766 1687 aa24.88■■□□□ 1.57
NECAB3-214ENST00000493590 STRN4Q9NRL3 753 aa24.88■■□□□ 1.57
NECAB3-214ENST00000493590 DCAF8L1A6NGE4 600 aa24.87■■□□□ 1.57
NECAB3-214ENST00000493590 PAK3O75914 559 aaPredicted RBP24.87■■□□□ 1.57
NECAB3-214ENST00000493590 CFAP70Q5T0N1 1121 aa24.87■■□□□ 1.57
NECAB3-214ENST00000493590 PARD3Q8TEW0 1356 aa24.87■■□□□ 1.57
NECAB3-214ENST00000493590 CRYBG1Q9Y4K1 1723 aa24.86■■□□□ 1.57
NECAB3-214ENST00000493590 HIRIP3Q9BW71 556 aaPredicted RBP24.86■■□□□ 1.57
NECAB3-214ENST00000493590 C14orf93Q9H972 538 aaKnown RBP24.86■■□□□ 1.57
NECAB3-214ENST00000493590 SPATA31A1Q5TZJ5 1347 aa24.86■■□□□ 1.57
NECAB3-214ENST00000493590 NBPF8Q3BBV2 869 aa24.85■■□□□ 1.57
NECAB3-214ENST00000493590 NBPF14Q5TI25 921 aa24.85■■□□□ 1.57
NECAB3-214ENST00000493590 USP35Q9P2H5 1018 aa24.85■■□□□ 1.57
NECAB3-214ENST00000493590 ACIN1Q9UKV3 1341 aaKnown RBP24.85■■□□□ 1.57
NECAB3-214ENST00000493590 CHRNA2Q15822 529 aa24.84■■□□□ 1.57
NECAB3-214ENST00000493590 KIAA0232Q92628 1395 aa24.81■■□□□ 1.56
NECAB3-214ENST00000493590 SPON1Q9HCB6 807 aa24.81■■□□□ 1.56
NECAB3-214ENST00000493590 PDE3BQ13370 1112 aa24.8■■□□□ 1.56
NECAB3-214ENST00000493590 NGDNQ8NEJ9 315 aaKnown RBP24.8■■□□□ 1.56
NECAB3-214ENST00000493590 MINK1Q8N4C8 1332 aaPredicted RBP24.8■■□□□ 1.56
NECAB3-214ENST00000493590 CAMTA1Q9Y6Y1 1673 aa24.79■■□□□ 1.56
NECAB3-214ENST00000493590 PRR36Q9H6K5 1346 aa24.79■■□□□ 1.56
NECAB3-214ENST00000493590 DLC1Q96QB1 1528 aa24.78■■□□□ 1.56
NECAB3-214ENST00000493590 KCNQ2O43526 872 aa24.77■■□□□ 1.56
NECAB3-214ENST00000493590 PHRF1Q9P1Y6 1649 aaKnown RBP24.76■■□□□ 1.55
NECAB3-214ENST00000493590 ZC3H6P61129 1189 aaKnown RBP24.76■■□□□ 1.55
NECAB3-214ENST00000493590 MPHOSPH9Q99550 1183 aa24.76■■□□□ 1.55
NECAB3-214ENST00000493590 EIF3AQ14152 1382 aaKnown RBP24.76■■□□□ 1.55
NECAB3-214ENST00000493590 NINLQ9Y2I6 1382 aa24.76■■□□□ 1.55
NECAB3-214ENST00000493590 TULP4Q9NRJ4 1543 aa24.76■■□□□ 1.55
NECAB3-214ENST00000493590 EVA1CP58658 441 aa24.75■■□□□ 1.55
NECAB3-214ENST00000493590 TRAK1Q9UPV9 953 aa24.75■■□□□ 1.55
NECAB3-214ENST00000493590 NUTM2GQ5VZR2 741 aa24.74■■□□□ 1.55
NECAB3-214ENST00000493590 SSH2Q76I76 1423 aa24.7■■□□□ 1.55
NECAB3-214ENST00000493590 BARGINQ6ZT62 677 aa24.7■■□□□ 1.54
NECAB3-214ENST00000493590 WASLO00401 505 aaPredicted RBP24.69■■□□□ 1.54
NECAB3-214ENST00000493590 LARP1Q6PKG0 1096 aaKnown RBP24.68■■□□□ 1.54
NECAB3-214ENST00000493590 ADGRB1O14514 1584 aa24.67■■□□□ 1.54
NECAB3-214ENST00000493590 ITSN1Q15811 1721 aa24.66■■□□□ 1.54
NECAB3-214ENST00000493590 TCP11L2Q8N4U5 519 aa24.66■■□□□ 1.54
NECAB3-214ENST00000493590 NRKQ7Z2Y5 1582 aa24.66■■□□□ 1.54
NECAB3-214ENST00000493590 ZNF784Q8NCA9 323 aaPredicted RBP24.64■■□□□ 1.54
NECAB3-214ENST00000493590 ATP7BP35670 1465 aa24.64■■□□□ 1.53
NECAB3-214ENST00000493590 SENP3-EIF4A1A0A087X0R7 540 aa24.63■■□□□ 1.53
NECAB3-214ENST00000493590 CASZ1Q86V15 1759 aa24.6■■□□□ 1.53
NECAB3-214ENST00000493590 MYOM1P52179 1685 aa24.6■■□□□ 1.53
NECAB3-214ENST00000493590 NUDT16Q96DE0 195 aaKnown RBP24.6■■□□□ 1.53
NECAB3-214ENST00000493590 ANO8Q9HCE9 1232 aaPredicted RBP24.6■■□□□ 1.53
NECAB3-214ENST00000493590 PARP4Q9UKK3 1724 aaKnown RBP24.6■■□□□ 1.53
NECAB3-214ENST00000493590 ZBTB7AO95365 584 aa24.59■■□□□ 1.53
NECAB3-214ENST00000493590 PDGFDQ9GZP0 370 aaPredicted RBP24.59■■□□□ 1.53
NECAB3-214ENST00000493590 LMO7Q8WWI1 1683 aa24.58■■□□□ 1.53
NECAB3-214ENST00000493590 OVOS2A0A0G2JMS6 1433 aa24.57■■□□□ 1.52
NECAB3-214ENST00000493590 OVOS2A0A0J9YW53 1432 aa24.57■■□□□ 1.52
NECAB3-214ENST00000493590 OVOS2Q6IE36 1432 aa24.57■■□□□ 1.52
NECAB3-214ENST00000493590 RGPD3A6NKT7 1758 aaPredicted RBP24.57■■□□□ 1.52
NECAB3-214ENST00000493590 RGPD4Q7Z3J3 1758 aa24.57■■□□□ 1.52
NECAB3-214ENST00000493590 BCL11BQ9C0K0 894 aaPredicted RBP24.56■■□□□ 1.52
NECAB3-214ENST00000493590 KDM2AQ9Y2K7 1162 aa24.56■■□□□ 1.52
NECAB3-214ENST00000493590 THRAP3Q9Y2W1 955 aaKnown RBP24.56■■□□□ 1.52
NECAB3-214ENST00000493590 ZBTB7CA1YPR0 619 aa24.55■■□□□ 1.52
NECAB3-214ENST00000493590 ABTB2Q8N961 1025 aa24.55■■□□□ 1.52
NECAB3-214ENST00000493590 SBF2Q86WG5 1849 aa24.54■■□□□ 1.52
NECAB3-214ENST00000493590 ATF5Q9Y2D1 282 aaPredicted RBP24.54■■□□□ 1.52
NECAB3-214ENST00000493590 PEAK1Q9H792 1746 aa24.54■■□□□ 1.52
NECAB3-214ENST00000493590 ACEP12821 1306 aa24.53■■□□□ 1.52
NECAB3-214ENST00000493590 ARHGEF28Q8N1W1 1705 aaKnown RBP24.52■■□□□ 1.52
NECAB3-214ENST00000493590 C11orf95C9JLR9 678 aaPredicted RBP24.52■■□□□ 1.52
NECAB3-214ENST00000493590 PTF1AQ7RTS3 328 aa24.52■■□□□ 1.52
NECAB3-214ENST00000493590 LRRC37A3O60309 1634 aa24.52■■□□□ 1.52
NECAB3-214ENST00000493590 CPDO75976 1380 aa24.52■■□□□ 1.52
NECAB3-214ENST00000493590 COL5A2P05997 1499 aaPredicted RBP24.51■■□□□ 1.51
NECAB3-214ENST00000493590 PLSCR1O15162 318 aa24.51■■□□□ 1.51
NECAB3-214ENST00000493590 TOPAZ1Q8N9V7 1692 aa24.5■■□□□ 1.51
NECAB3-214ENST00000493590 CDK19Q9BWU1 502 aa24.5■■□□□ 1.51
NECAB3-214ENST00000493590 UTRNP46939 3433 aa24.49■■□□□ 1.51
NECAB3-214ENST00000493590 PTGER2P43116 358 aa24.49■■□□□ 1.51
NECAB3-214ENST00000493590 C1QTNF8P60827 252 aa24.49■■□□□ 1.51
NECAB3-214ENST00000493590 FHDC1Q9C0D6 1143 aaPredicted RBP24.49■■□□□ 1.51
NECAB3-214ENST00000493590 POLR3AO14802 1390 aaPredicted RBP24.49■■□□□ 1.51
NECAB3-214ENST00000493590 CRB1P82279 1406 aa24.49■■□□□ 1.51
NECAB3-214ENST00000493590 DDB1Q16531 1140 aa24.48■■□□□ 1.51
NECAB3-214ENST00000493590 DCAF11Q8TEB1 546 aa24.48■■□□□ 1.51
NECAB3-214ENST00000493590 CHD4Q14839 1912 aa24.47■■□□□ 1.51
NECAB3-214ENST00000493590 USP19O94966 1318 aa24.47■■□□□ 1.51
NECAB3-214ENST00000493590 GCP02774 474 aa24.46■■□□□ 1.51
NECAB3-214ENST00000493590 SYT17Q9BSW7 474 aa24.46■■□□□ 1.51
NECAB3-214ENST00000493590 STK32BQ9NY57 414 aa24.45■■□□□ 1.5
NECAB3-214ENST00000493590 NLRP13Q86W25 1043 aa24.44■■□□□ 1.5
NECAB3-214ENST00000493590 PROM2Q8N271 834 aa24.44■■□□□ 1.5
NECAB3-214ENST00000493590 TOM1L2Q6ZVM7 507 aa24.43■■□□□ 1.5
NECAB3-214ENST00000493590 CCDC61Q9Y6R9 512 aa24.43■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms