RNA–Protein interactions for RNA: ENST00000491229.1

PSMD1-212, Transcript of proteasome 26S subunit, non-ATPase 1, humanhuman

TSL 2

Gene PSMD1, Length 546 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD1-212ENST00000491229 PTPRTO14522 1441 aa7.24□□□□□ -1.25
PSMD1-212ENST00000491229 FER1L4A9Z1Z3 1794 aa7.23□□□□□ -1.25
PSMD1-212ENST00000491229 CDK13Q14004 1512 aaKnown RBP7.23□□□□□ -1.25
PSMD1-212ENST00000491229 PREX1Q8TCU6 1659 aa7.23□□□□□ -1.25
PSMD1-212ENST00000491229 RNF40O75150 1001 aa7.23□□□□□ -1.25
PSMD1-212ENST00000491229 RANGAP1P46060 587 aaPredicted RBP7.23□□□□□ -1.25
PSMD1-212ENST00000491229 PRIM1P49642 420 aaKnown RBP7.23□□□□□ -1.25
PSMD1-212ENST00000491229 NYAP1Q6ZVC0 841 aa7.23□□□□□ -1.25
PSMD1-212ENST00000491229 AFAP1Q8N556 730 aa7.23□□□□□ -1.25
PSMD1-212ENST00000491229 PODXL2Q9NZ53 605 aa7.23□□□□□ -1.25
PSMD1-212ENST00000491229 KDM5CP41229 1560 aa7.22□□□□□ -1.25
PSMD1-212ENST00000491229 REREQ9P2R6 1566 aa7.22□□□□□ -1.25
PSMD1-212ENST00000491229 BCAMP50895 628 aa7.22□□□□□ -1.25
PSMD1-212ENST00000491229 ARID3AQ99856 593 aa7.22□□□□□ -1.25
PSMD1-212ENST00000491229 PNMA3Q9UL41 463 aa7.22□□□□□ -1.25
PSMD1-212ENST00000491229 CDK11AQ9UQ88 783 aaPredicted RBP7.22□□□□□ -1.25
PSMD1-212ENST00000491229 ZNF518AQ6AHZ1 1483 aa7.22□□□□□ -1.25
PSMD1-212ENST00000491229 MLH3Q9UHC1 1453 aa7.22□□□□□ -1.25
PSMD1-212ENST00000491229 SOWAHBA6NEL2 793 aa7.21□□□□□ -1.26
PSMD1-212ENST00000491229 APBB1O00213 710 aa7.21□□□□□ -1.26
PSMD1-212ENST00000491229 PPP4CP60510 307 aa7.21□□□□□ -1.26
PSMD1-212ENST00000491229 MCM6Q14566 821 aa7.21□□□□□ -1.26
PSMD1-212ENST00000491229 NECTIN2Q92692 538 aa7.21□□□□□ -1.26
PSMD1-212ENST00000491229 TMUB1Q9BVT8 246 aa7.21□□□□□ -1.26
PSMD1-212ENST00000491229 C1orf115Q9H7X2 142 aa7.21□□□□□ -1.26
PSMD1-212ENST00000491229 CDHR5Q9HBB8 845 aa7.21□□□□□ -1.26
PSMD1-212ENST00000491229 AGLP35573 1532 aa7.21□□□□□ -1.26
PSMD1-212ENST00000491229 DISP3Q9P2K9 1392 aa7.2□□□□□ -1.26
PSMD1-212ENST00000491229 LTBP4Q8N2S1 1624 aa7.2□□□□□ -1.26
PSMD1-212ENST00000491229 TROQ12816 1431 aaPredicted RBP7.2□□□□□ -1.26
PSMD1-212ENST00000491229 FMN1Q68DA7 1419 aa7.2□□□□□ -1.26
PSMD1-212ENST00000491229 UHRF1BP1Q6BDS2 1440 aa7.2□□□□□ -1.26
PSMD1-212ENST00000491229 TRAPPC8Q9Y2L5 1435 aa7.2□□□□□ -1.26
PSMD1-212ENST00000491229 IQSEC2Q5JU85 1478 aa7.2□□□□□ -1.26
PSMD1-212ENST00000491229 TSR3Q9UJK0 312 aaKnown RBP7.2□□□□□ -1.26
PSMD1-212ENST00000491229 TSKSQ9UJT2 592 aa7.2□□□□□ -1.26
PSMD1-212ENST00000491229 HPS5Q9UPZ3 1129 aa7.2□□□□□ -1.26
PSMD1-212ENST00000491229 MYO5CQ9NQX4 1742 aa7.19□□□□□ -1.26
PSMD1-212ENST00000491229 MDM2Q00987 491 aaPredicted RBP7.19□□□□□ -1.26
PSMD1-212ENST00000491229 SKIV2LQ15477 1246 aaKnown RBP7.19□□□□□ -1.26
PSMD1-212ENST00000491229 TATDN2Q93075 761 aa7.19□□□□□ -1.26
PSMD1-212ENST00000491229 DIP2CQ9Y2E4 1556 aa7.19□□□□□ -1.26
PSMD1-212ENST00000491229 ARHGAP35Q9NRY4 1499 aa7.18□□□□□ -1.26
PSMD1-212ENST00000491229 SMAPO00193 183 aa7.18□□□□□ -1.26
PSMD1-212ENST00000491229 OATP04181 439 aa7.18□□□□□ -1.26
PSMD1-212ENST00000491229 NUDT18Q6ZVK8 323 aa7.18□□□□□ -1.26
PSMD1-212ENST00000491229 NPDC1Q9NQX5 325 aaPredicted RBP7.18□□□□□ -1.26
PSMD1-212ENST00000491229 RBM27Q9P2N5 1060 aaKnown RBP7.18□□□□□ -1.26
PSMD1-212ENST00000491229 KIF14Q15058 1648 aa7.18□□□□□ -1.26
PSMD1-212ENST00000491229 C3P01024 1663 aa7.17□□□□□ -1.26
PSMD1-212ENST00000491229 TRAK2O60296 914 aa7.17□□□□□ -1.26
PSMD1-212ENST00000491229 REPIN1Q9BWE0 567 aaKnown RBP7.17□□□□□ -1.26
PSMD1-212ENST00000491229 NCOA1Q15788 1441 aa7.17□□□□□ -1.26
PSMD1-212ENST00000491229 CNTLNQ9NXG0 1405 aa7.17□□□□□ -1.26
PSMD1-212ENST00000491229 ARHGAP5Q13017 1502 aa7.17□□□□□ -1.26
PSMD1-212ENST00000491229 RAD21O60216 631 aa7.16□□□□□ -1.26
PSMD1-212ENST00000491229 SSTR3P32745 418 aaPredicted RBP7.16□□□□□ -1.26
PSMD1-212ENST00000491229 DIXDC1Q155Q3 683 aa7.16□□□□□ -1.26
PSMD1-212ENST00000491229 SAMD7Q7Z3H4 446 aa7.16□□□□□ -1.26
PSMD1-212ENST00000491229 METTL3Q86U44 580 aaKnown RBP7.16□□□□□ -1.26
PSMD1-212ENST00000491229 PROSER2Q86WR7 435 aaPredicted RBP7.16□□□□□ -1.26
PSMD1-212ENST00000491229 WBP1LQ9NX94 342 aa7.16□□□□□ -1.26
PSMD1-212ENST00000491229 ATP1B4Q9UN42 357 aaPredicted RBP7.16□□□□□ -1.26
PSMD1-212ENST00000491229 CLIP1P30622 1438 aa7.16□□□□□ -1.26
PSMD1-212ENST00000491229 ABCA6Q8N139 1617 aa7.16□□□□□ -1.26
PSMD1-212ENST00000491229 CDC42BPBQ9Y5S2 1711 aa7.15□□□□□ -1.26
PSMD1-212ENST00000491229 PADI6Q6TGC4 694 aa7.15□□□□□ -1.26
PSMD1-212ENST00000491229 BEGAINQ9BUH8 593 aa7.15□□□□□ -1.26
PSMD1-212ENST00000491229 FAM217BQ9NTX9 383 aaPredicted RBP7.15□□□□□ -1.26
PSMD1-212ENST00000491229 ZMYM3Q14202 1370 aa7.15□□□□□ -1.26
PSMD1-212ENST00000491229 NPATQ14207 1427 aa7.15□□□□□ -1.27
PSMD1-212ENST00000491229 ABCC1P33527 1531 aa7.14□□□□□ -1.27
PSMD1-212ENST00000491229 KCNC4Q03721 635 aa7.14□□□□□ -1.27
PSMD1-212ENST00000491229 SLF2Q8IX21 1173 aa7.14□□□□□ -1.27
PSMD1-212ENST00000491229 CCDC82Q8N4S0 544 aa7.14□□□□□ -1.27
PSMD1-212ENST00000491229 RBM46Q8TBY0 533 aaKnown RBP7.14□□□□□ -1.27
PSMD1-212ENST00000491229 CLUAP1Q96AJ1 413 aa7.14□□□□□ -1.27
PSMD1-212ENST00000491229 ESF1Q9H501 851 aaKnown RBP7.14□□□□□ -1.27
PSMD1-212ENST00000491229 KIDINS220Q9ULH0 1771 aa7.14□□□□□ -1.27
PSMD1-212ENST00000491229 LRRIQ1Q96JM4 1722 aa7.13□□□□□ -1.27
PSMD1-212ENST00000491229 SPDYE5A6NIY4 337 aa7.13□□□□□ -1.27
PSMD1-212ENST00000491229 PREX2Q70Z35 1606 aa7.12□□□□□ -1.27
PSMD1-212ENST00000491229 SPATA31D1Q6ZQQ2 1576 aa7.12□□□□□ -1.27
PSMD1-212ENST00000491229 CASKIN1Q8WXD9 1431 aa7.12□□□□□ -1.27
PSMD1-212ENST00000491229 CLK2P49760 499 aaKnown RBP7.12□□□□□ -1.27
PSMD1-212ENST00000491229 PXYLP1Q8TE99 480 aa7.12□□□□□ -1.27
PSMD1-212ENST00000491229 PHOX2BQ99453 314 aa7.12□□□□□ -1.27
PSMD1-212ENST00000491229 MROH2AA6NES4 1674 aa7.12□□□□□ -1.27
PSMD1-212ENST00000491229 ITSN2Q9NZM3 1697 aa7.12□□□□□ -1.27
PSMD1-212ENST00000491229 CAMSAP1Q5T5Y3 1602 aa7.12□□□□□ -1.27
PSMD1-212ENST00000491229 PLA2R1Q13018 1463 aa7.11□□□□□ -1.27
PSMD1-212ENST00000491229 TCOF1Q13428 1488 aaKnown RBP7.11□□□□□ -1.27
PSMD1-212ENST00000491229 KIAA1107Q9UPP5 1409 aa7.11□□□□□ -1.27
PSMD1-212ENST00000491229 ZNF335Q9H4Z2 1342 aaPredicted RBP7.11□□□□□ -1.27
PSMD1-212ENST00000491229 PDIA4P13667 645 aaKnown RBP7.11□□□□□ -1.27
PSMD1-212ENST00000491229 RSPH4AQ5TD94 716 aa7.11□□□□□ -1.27
PSMD1-212ENST00000491229 MYSM1Q5VVJ2 828 aa7.11□□□□□ -1.27
PSMD1-212ENST00000491229 BANK1Q8NDB2 785 aa7.11□□□□□ -1.27
PSMD1-212ENST00000491229 CCDC97Q96F63 343 aaPredicted RBP7.11□□□□□ -1.27
PSMD1-212ENST00000491229 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms