RNA–Protein interactions for RNA: ENST00000489555.1

PRUNE2-213, Transcript of prune homolog 2, humanhuman

TSL 3

Gene PRUNE2, Length 635 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRUNE2-213ENST00000489555 FAM196AQ6ZSG2 479 aa11.19□□□□□ -0.62
PRUNE2-213ENST00000489555 CAMKK2Q96RR4 588 aa11.19□□□□□ -0.62
PRUNE2-213ENST00000489555 C14orf93Q9H972 538 aaKnown RBP11.19□□□□□ -0.62
PRUNE2-213ENST00000489555 CHD4Q14839 1912 aa11.19□□□□□ -0.62
PRUNE2-213ENST00000489555 UTRNP46939 3433 aa11.19□□□□□ -0.62
PRUNE2-213ENST00000489555 GPRASP1Q5JY77 1395 aa11.18□□□□□ -0.62
PRUNE2-213ENST00000489555 NINLQ9Y2I6 1382 aa11.18□□□□□ -0.62
PRUNE2-213ENST00000489555 YY1P25490 414 aa11.18□□□□□ -0.62
PRUNE2-213ENST00000489555 TULP4Q9NRJ4 1543 aa11.18□□□□□ -0.62
PRUNE2-213ENST00000489555 MSH5O43196 834 aa11.17□□□□□ -0.62
PRUNE2-213ENST00000489555 LMOD2Q6P5Q4 547 aa11.17□□□□□ -0.62
PRUNE2-213ENST00000489555 PARP4Q9UKK3 1724 aaKnown RBP11.17□□□□□ -0.62
PRUNE2-213ENST00000489555 SBF2Q86WG5 1849 aa11.16□□□□□ -0.62
PRUNE2-213ENST00000489555 SPATA31A1Q5TZJ5 1347 aa11.16□□□□□ -0.62
PRUNE2-213ENST00000489555 EZH2Q15910 746 aaKnown RBP11.16□□□□□ -0.62
PRUNE2-213ENST00000489555 ATP7BP35670 1465 aa11.16□□□□□ -0.62
PRUNE2-213ENST00000489555 ACIN1Q9UKV3 1341 aaKnown RBP11.15□□□□□ -0.62
PRUNE2-213ENST00000489555 C11orf95C9JLR9 678 aaPredicted RBP11.15□□□□□ -0.62
PRUNE2-213ENST00000489555 ADGRB1O14514 1584 aa11.15□□□□□ -0.62
PRUNE2-213ENST00000489555 DCAF8L1A6NGE4 600 aa11.14□□□□□ -0.63
PRUNE2-213ENST00000489555 NBPF8Q3BBV2 869 aa11.14□□□□□ -0.63
PRUNE2-213ENST00000489555 RGL3Q3MIN7 710 aa11.14□□□□□ -0.63
PRUNE2-213ENST00000489555 NBPF14Q5TI25 921 aa11.14□□□□□ -0.63
PRUNE2-213ENST00000489555 PRAM1Q96QH2 718 aa11.14□□□□□ -0.63
PRUNE2-213ENST00000489555 CASZ1Q86V15 1759 aa11.13□□□□□ -0.63
PRUNE2-213ENST00000489555 TRIM37O94972 964 aa11.13□□□□□ -0.63
PRUNE2-213ENST00000489555 BARGINQ6ZT62 677 aa11.13□□□□□ -0.63
PRUNE2-213ENST00000489555 PRDM11Q9NQV5 511 aa11.13□□□□□ -0.63
PRUNE2-213ENST00000489555 LMO7Q8WWI1 1683 aa11.13□□□□□ -0.63
PRUNE2-213ENST00000489555 APBA3O96018 575 aa11.12□□□□□ -0.63
PRUNE2-213ENST00000489555 FAM182BQ5T319 152 aa11.12□□□□□ -0.63
PRUNE2-213ENST00000489555 PMFBP1Q8TBY8 1022 aa11.12□□□□□ -0.63
PRUNE2-213ENST00000489555 SPON1Q9HCB6 807 aa11.12□□□□□ -0.63
PRUNE2-213ENST00000489555 PEAK1Q9H792 1746 aa11.12□□□□□ -0.63
PRUNE2-213ENST00000489555 TOPAZ1Q8N9V7 1692 aa11.11□□□□□ -0.63
PRUNE2-213ENST00000489555 POGKQ9P215 609 aa11.11□□□□□ -0.63
PRUNE2-213ENST00000489555 ARHGEF28Q8N1W1 1705 aaKnown RBP11.11□□□□□ -0.63
PRUNE2-213ENST00000489555 KIAA0232Q92628 1395 aa11.11□□□□□ -0.63
PRUNE2-213ENST00000489555 NRKQ7Z2Y5 1582 aa11.11□□□□□ -0.63
PRUNE2-213ENST00000489555 CAMTA1Q9Y6Y1 1673 aa11.11□□□□□ -0.63
PRUNE2-213ENST00000489555 SSH2Q76I76 1423 aa11.1□□□□□ -0.63
PRUNE2-213ENST00000489555 WNK3Q9BYP7 1800 aa11.1□□□□□ -0.63
PRUNE2-213ENST00000489555 PLEKHG5O94827 1062 aa11.1□□□□□ -0.63
PRUNE2-213ENST00000489555 CFAP70Q5T0N1 1121 aa11.1□□□□□ -0.63
PRUNE2-213ENST00000489555 MPHOSPH9Q99550 1183 aa11.1□□□□□ -0.63
PRUNE2-213ENST00000489555 PPP1R1BQ9UD71 204 aaPredicted RBP11.1□□□□□ -0.63
PRUNE2-213ENST00000489555 PRR36Q9H6K5 1346 aa11.09□□□□□ -0.63
PRUNE2-213ENST00000489555 AKAP12Q02952 1782 aa11.09□□□□□ -0.63
PRUNE2-213ENST00000489555 CPDO75976 1380 aa11.09□□□□□ -0.63
PRUNE2-213ENST00000489555 KCNQ2O43526 872 aa11.09□□□□□ -0.63
PRUNE2-213ENST00000489555 PDE3BQ13370 1112 aa11.09□□□□□ -0.63
PRUNE2-213ENST00000489555 THRAP3Q9Y2W1 955 aaKnown RBP11.09□□□□□ -0.63
PRUNE2-213ENST00000489555 SAFB2Q14151 953 aaKnown RBP eCLIP11.08□□□□□ -0.64
PRUNE2-213ENST00000489555 WASLO00401 505 aaPredicted RBP11.07□□□□□ -0.64
PRUNE2-213ENST00000489555 NGDNQ8NEJ9 315 aaKnown RBP11.07□□□□□ -0.64
PRUNE2-213ENST00000489555 LRRC37A3O60309 1634 aa11.06□□□□□ -0.64
PRUNE2-213ENST00000489555 POLR3AO14802 1390 aaPredicted RBP11.06□□□□□ -0.64
PRUNE2-213ENST00000489555 MYOM1P52179 1685 aa11.06□□□□□ -0.64
PRUNE2-213ENST00000489555 TCP11L2Q8N4U5 519 aa11.06□□□□□ -0.64
PRUNE2-213ENST00000489555 STAC3Q96MF2 364 aa11.06□□□□□ -0.64
PRUNE2-213ENST00000489555 OVOS2A0A0G2JMS6 1433 aa11.06□□□□□ -0.64
PRUNE2-213ENST00000489555 OVOS2A0A0J9YW53 1432 aa11.06□□□□□ -0.64
PRUNE2-213ENST00000489555 OVOS2Q6IE36 1432 aa11.06□□□□□ -0.64
PRUNE2-213ENST00000489555 PLSCR1O15162 318 aa11.05□□□□□ -0.64
PRUNE2-213ENST00000489555 PAK3O75914 559 aaPredicted RBP11.05□□□□□ -0.64
PRUNE2-213ENST00000489555 STRN4Q9NRL3 753 aa11.05□□□□□ -0.64
PRUNE2-213ENST00000489555 BCL9O00512 1426 aa11.04□□□□□ -0.64
PRUNE2-213ENST00000489555 EVA1CP58658 441 aa11.04□□□□□ -0.64
PRUNE2-213ENST00000489555 COL5A2P05997 1499 aaPredicted RBP11.04□□□□□ -0.64
PRUNE2-213ENST00000489555 MINK1Q8N4C8 1332 aaPredicted RBP11.04□□□□□ -0.64
PRUNE2-213ENST00000489555 KIAA1210Q9ULL0 1709 aa11.04□□□□□ -0.64
PRUNE2-213ENST00000489555 CHRNA2Q15822 529 aa11.03□□□□□ -0.64
PRUNE2-213ENST00000489555 PPARGC1BQ86YN6 1023 aaKnown RBP11.03□□□□□ -0.64
PRUNE2-213ENST00000489555 HIRIP3Q9BW71 556 aaPredicted RBP11.03□□□□□ -0.64
PRUNE2-213ENST00000489555 CEP350Q5VT06 3117 aa11.03□□□□□ -0.64
PRUNE2-213ENST00000489555 USP19O94966 1318 aa11.03□□□□□ -0.64
PRUNE2-213ENST00000489555 GOLGB1Q14789 3259 aaKnown RBP11.03□□□□□ -0.64
PRUNE2-213ENST00000489555 BRD4O60885 1362 aaPredicted RBP11.03□□□□□ -0.64
PRUNE2-213ENST00000489555 CRB1P82279 1406 aa11.02□□□□□ -0.64
PRUNE2-213ENST00000489555 TRAK1Q9UPV9 953 aa11.02□□□□□ -0.65
PRUNE2-213ENST00000489555 ZC3H6P61129 1189 aaKnown RBP11.01□□□□□ -0.65
PRUNE2-213ENST00000489555 LARP1Q6PKG0 1096 aaKnown RBP11.01□□□□□ -0.65
PRUNE2-213ENST00000489555 ZNF784Q8NCA9 323 aaPredicted RBP11.01□□□□□ -0.65
PRUNE2-213ENST00000489555 NUDT16Q96DE0 195 aaKnown RBP11.01□□□□□ -0.65
PRUNE2-213ENST00000489555 USP35Q9P2H5 1018 aa11.01□□□□□ -0.65
PRUNE2-213ENST00000489555 AATKQ6ZMQ8 1374 aa11.01□□□□□ -0.65
PRUNE2-213ENST00000489555 COL18A1P39060 1754 aa11□□□□□ -0.65
PRUNE2-213ENST00000489555 QSER1Q2KHR3 1735 aa10.99□□□□□ -0.65
PRUNE2-213ENST00000489555 PLEKHG3A1L390 1219 aa10.99□□□□□ -0.65
PRUNE2-213ENST00000489555 BCL11BQ9C0K0 894 aaPredicted RBP10.99□□□□□ -0.65
PRUNE2-213ENST00000489555 CCDC61Q9Y6R9 512 aa10.99□□□□□ -0.65
PRUNE2-213ENST00000489555 MAP3K5Q99683 1374 aa10.99□□□□□ -0.65
PRUNE2-213ENST00000489555 SLIT3O75094 1523 aa10.99□□□□□ -0.65
PRUNE2-213ENST00000489555 COL24A1Q17RW2 1714 aa10.98□□□□□ -0.65
PRUNE2-213ENST00000489555 KAT6BQ8WYB5 2073 aa10.98□□□□□ -0.65
PRUNE2-213ENST00000489555 CDCA7Q9BWT1 371 aaPredicted RBP10.98□□□□□ -0.65
PRUNE2-213ENST00000489555 ANO8Q9HCE9 1232 aaPredicted RBP10.98□□□□□ -0.65
PRUNE2-213ENST00000489555 ACEP12821 1306 aa10.98□□□□□ -0.65
PRUNE2-213ENST00000489555 NHSQ6T4R5 1651 aa10.98□□□□□ -0.65
PRUNE2-213ENST00000489555 RGPD5Q99666 1765 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms