RNA–Protein interactions for RNA: ENST00000489032.5

TRAPPC12-221, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 561 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-221ENST00000489032 SOWAHBA6NEL2 793 aa12.99□□□□□ -0.33
TRAPPC12-221ENST00000489032 HPS5Q9UPZ3 1129 aa12.98□□□□□ -0.33
TRAPPC12-221ENST00000489032 KIAA0556O60303 1618 aa12.96□□□□□ -0.33
TRAPPC12-221ENST00000489032 MOXD2PA6NHM9 499 aa12.96□□□□□ -0.33
TRAPPC12-221ENST00000489032 BCAMP50895 628 aa12.96□□□□□ -0.33
TRAPPC12-221ENST00000489032 PROCA1Q8NCQ7 364 aaPredicted RBP12.96□□□□□ -0.33
TRAPPC12-221ENST00000489032 TSR3Q9UJK0 312 aaKnown RBP12.96□□□□□ -0.33
TRAPPC12-221ENST00000489032 UGGT2Q9NYU1 1516 aa12.96□□□□□ -0.33
TRAPPC12-221ENST00000489032 PHLDB1Q86UU1 1377 aa12.95□□□□□ -0.34
TRAPPC12-221ENST00000489032 RIMS1Q86UR5 1692 aaKnown RBP12.95□□□□□ -0.34
TRAPPC12-221ENST00000489032 CTTNBP2Q8WZ74 1663 aa12.95□□□□□ -0.34
TRAPPC12-221ENST00000489032 GOLGA3Q08378 1498 aa12.94□□□□□ -0.34
TRAPPC12-221ENST00000489032 SPTLC1O15269 473 aa12.94□□□□□ -0.34
TRAPPC12-221ENST00000489032 UBTFP17480 764 aaKnown RBP12.94□□□□□ -0.34
TRAPPC12-221ENST00000489032 NDUFV2P19404 249 aa12.94□□□□□ -0.34
TRAPPC12-221ENST00000489032 CSPP1Q1MSJ5 1256 aa12.94□□□□□ -0.34
TRAPPC12-221ENST00000489032 RSBN1LQ6PCB5 846 aaPredicted RBP12.94□□□□□ -0.34
TRAPPC12-221ENST00000489032 HOXA2O43364 376 aa12.93□□□□□ -0.34
TRAPPC12-221ENST00000489032 GJA5P36382 358 aa12.93□□□□□ -0.34
TRAPPC12-221ENST00000489032 ATP6V1AP38606 617 aa12.93□□□□□ -0.34
TRAPPC12-221ENST00000489032 FUT2Q10981 343 aa12.93□□□□□ -0.34
TRAPPC12-221ENST00000489032 KCTD12Q96CX2 325 aaKnown RBP12.93□□□□□ -0.34
TRAPPC12-221ENST00000489032 RAPGEF3O95398 923 aa12.92□□□□□ -0.34
TRAPPC12-221ENST00000489032 FDX1P10109 184 aa12.92□□□□□ -0.34
TRAPPC12-221ENST00000489032 C14orf37Q86TY3 774 aa12.92□□□□□ -0.34
TRAPPC12-221ENST00000489032 LIMD1Q9UGP4 676 aa12.92□□□□□ -0.34
TRAPPC12-221ENST00000489032 NUTM2BA6NNL0 878 aaPredicted RBP12.91□□□□□ -0.34
TRAPPC12-221ENST00000489032 NUTM2EB1AL46 878 aaPredicted RBP12.91□□□□□ -0.34
TRAPPC12-221ENST00000489032 NUTM2DQ5VT03 806 aaPredicted RBP12.91□□□□□ -0.34
TRAPPC12-221ENST00000489032 NUTM2AQ8IVF1 878 aaPredicted RBP12.91□□□□□ -0.34
TRAPPC12-221ENST00000489032 TUSC1Q2TAM9 212 aa12.9□□□□□ -0.34
TRAPPC12-221ENST00000489032 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.9□□□□□ -0.34
TRAPPC12-221ENST00000489032 ACTN4O43707 911 aaKnown RBP12.89□□□□□ -0.35
TRAPPC12-221ENST00000489032 THSD4Q6ZMP0 1018 aa12.88□□□□□ -0.35
TRAPPC12-221ENST00000489032 ABCA8O94911 1581 aa12.87□□□□□ -0.35
TRAPPC12-221ENST00000489032 ZBTB3Q9H5J0 574 aa12.87□□□□□ -0.35
TRAPPC12-221ENST00000489032 NEO1Q92859 1461 aa12.86□□□□□ -0.35
TRAPPC12-221ENST00000489032 FLIIQ13045 1269 aa12.86□□□□□ -0.35
TRAPPC12-221ENST00000489032 POGZQ7Z3K3 1410 aa12.86□□□□□ -0.35
TRAPPC12-221ENST00000489032 RANGAP1P46060 587 aaPredicted RBP12.85□□□□□ -0.35
TRAPPC12-221ENST00000489032 GUCA2AQ02747 115 aa12.85□□□□□ -0.35
TRAPPC12-221ENST00000489032 PRPF38BQ5VTL8 546 aaKnown RBP12.85□□□□□ -0.35
TRAPPC12-221ENST00000489032 WBP1LQ9NX94 342 aa12.85□□□□□ -0.35
TRAPPC12-221ENST00000489032 PCDH10Q9P2E7 1040 aa12.85□□□□□ -0.35
TRAPPC12-221ENST00000489032 PCDHB3Q9Y5E6 796 aa12.85□□□□□ -0.35
TRAPPC12-221ENST00000489032 PCDHB15Q9Y5E8 787 aa12.85□□□□□ -0.35
TRAPPC12-221ENST00000489032 ABCA9Q8IUA7 1624 aa12.84□□□□□ -0.35
TRAPPC12-221ENST00000489032 C6orf229H3BNL8 230 aa12.84□□□□□ -0.35
TRAPPC12-221ENST00000489032 PUS10Q3MIT2 529 aaKnown RBP12.84□□□□□ -0.35
TRAPPC12-221ENST00000489032 FRMPD1Q5SYB0 1578 aa12.84□□□□□ -0.35
TRAPPC12-221ENST00000489032 ARHGEF40Q8TER5 1519 aa12.83□□□□□ -0.35
TRAPPC12-221ENST00000489032 APLP1P51693 650 aa12.83□□□□□ -0.36
TRAPPC12-221ENST00000489032 PTPN5P54829 565 aa12.83□□□□□ -0.36
TRAPPC12-221ENST00000489032 Q3C1V9 767 aa12.83□□□□□ -0.36
TRAPPC12-221ENST00000489032 NYAP1Q6ZVC0 841 aa12.83□□□□□ -0.36
TRAPPC12-221ENST00000489032 HLA-CQ95604 372 aa12.83□□□□□ -0.36
TRAPPC12-221ENST00000489032 MYT1LQ9UL68 1186 aa12.83□□□□□ -0.36
TRAPPC12-221ENST00000489032 YEATS2Q9ULM3 1422 aa12.82□□□□□ -0.36
TRAPPC12-221ENST00000489032 RFC5P40937 340 aa12.82□□□□□ -0.36
TRAPPC12-221ENST00000489032 MTMR2Q13614 643 aa12.82□□□□□ -0.36
TRAPPC12-221ENST00000489032 TMEM259Q4ZIN3 620 aa12.82□□□□□ -0.36
TRAPPC12-221ENST00000489032 PPP2R2DQ66LE6 453 aa12.82□□□□□ -0.36
TRAPPC12-221ENST00000489032 FANCAO15360 1455 aa12.82□□□□□ -0.36
TRAPPC12-221ENST00000489032 LILRB3O75022 631 aa12.81□□□□□ -0.36
TRAPPC12-221ENST00000489032 HRCP23327 699 aa12.81□□□□□ -0.36
TRAPPC12-221ENST00000489032 QPCTQ16769 361 aa12.81□□□□□ -0.36
TRAPPC12-221ENST00000489032 MORN1Q5T089 497 aa12.81□□□□□ -0.36
TRAPPC12-221ENST00000489032 TIMELESSQ9UNS1 1208 aa12.81□□□□□ -0.36
TRAPPC12-221ENST00000489032 SPDYE5A6NIY4 337 aa12.8□□□□□ -0.36
TRAPPC12-221ENST00000489032 NR1I2O75469 434 aa12.8□□□□□ -0.36
TRAPPC12-221ENST00000489032 CABLES1Q8TDN4 633 aa12.8□□□□□ -0.36
TRAPPC12-221ENST00000489032 PCDHGC3Q9UN70 934 aa12.8□□□□□ -0.36
TRAPPC12-221ENST00000489032 PREX1Q8TCU6 1659 aa12.8□□□□□ -0.36
TRAPPC12-221ENST00000489032 ARID3CA6NKF2 412 aa12.79□□□□□ -0.36
TRAPPC12-221ENST00000489032 FER1L4A9Z1Z3 1794 aa12.79□□□□□ -0.36
TRAPPC12-221ENST00000489032 AKNAQ7Z591 1439 aa12.79□□□□□ -0.36
TRAPPC12-221ENST00000489032 EFCAB5A4FU69 1503 aa12.78□□□□□ -0.36
TRAPPC12-221ENST00000489032 TSC1Q92574 1164 aa12.78□□□□□ -0.36
TRAPPC12-221ENST00000489032 SLC27A5Q9Y2P5 690 aa12.78□□□□□ -0.36
TRAPPC12-221ENST00000489032 STRCQ7RTU9 1775 aa12.78□□□□□ -0.36
TRAPPC12-221ENST00000489032 SAMD9Q5K651 1589 aa12.77□□□□□ -0.36
TRAPPC12-221ENST00000489032 TTC37Q6PGP7 1564 aa12.77□□□□□ -0.36
TRAPPC12-221ENST00000489032 DENND4BO75064 1496 aaPredicted RBP12.77□□□□□ -0.37
TRAPPC12-221ENST00000489032 ATP10BO94823 1461 aa12.77□□□□□ -0.37
TRAPPC12-221ENST00000489032 AP1G2O75843 785 aa12.76□□□□□ -0.37
TRAPPC12-221ENST00000489032 MLECQ14165 292 aa12.76□□□□□ -0.37
TRAPPC12-221ENST00000489032 RTL5Q5HYW3 569 aaPredicted RBP12.76□□□□□ -0.37
TRAPPC12-221ENST00000489032 BANK1Q8NDB2 785 aa12.76□□□□□ -0.37
TRAPPC12-221ENST00000489032 HELBQ8NG08 1087 aaPredicted RBP12.76□□□□□ -0.37
TRAPPC12-221ENST00000489032 RICTORQ6R327 1708 aa12.76□□□□□ -0.37
TRAPPC12-221ENST00000489032 IQSEC2Q5JU85 1478 aa12.74□□□□□ -0.37
TRAPPC12-221ENST00000489032 FMNL1O95466 1100 aaPredicted RBP12.74□□□□□ -0.37
TRAPPC12-221ENST00000489032 BLOC1S3Q6QNY0 202 aa12.74□□□□□ -0.37
TRAPPC12-221ENST00000489032 SCUBE3Q8IX30 993 aa12.74□□□□□ -0.37
TRAPPC12-221ENST00000489032 FHOD3Q2V2M9 1422 aa12.73□□□□□ -0.37
TRAPPC12-221ENST00000489032 LOC105371045A0A1W2PR82 267 aa12.73□□□□□ -0.37
TRAPPC12-221ENST00000489032 COPS2P61201 443 aa12.73□□□□□ -0.37
TRAPPC12-221ENST00000489032 RETREG3Q86VR2 466 aa12.73□□□□□ -0.37
TRAPPC12-221ENST00000489032 SYMPKQ92797 1274 aaKnown RBP12.73□□□□□ -0.37
TRAPPC12-221ENST00000489032 ZFYVE16Q7Z3T8 1539 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 1011.3 ms