RNA–Protein interactions for RNA: ENST00000487890.5

GPNMB-212, Transcript of glycoprotein nmb, humanhuman

TSL 5

Gene GPNMB, Length 577 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-212ENST00000487890 BAZ1AQ9NRL2 1556 aaPredicted RBP5.48□□□□□ -1.53
GPNMB-212ENST00000487890 ERCC6Q03468 1493 aa5.48□□□□□ -1.53
GPNMB-212ENST00000487890 ATAD2BQ9ULI0 1458 aa5.48□□□□□ -1.53
GPNMB-212ENST00000487890 ZBBXA8MT70 800 aa5.48□□□□□ -1.53
GPNMB-212ENST00000487890 ACTN4O43707 911 aaKnown RBP5.48□□□□□ -1.53
GPNMB-212ENST00000487890 SKIP12755 728 aa5.48□□□□□ -1.53
GPNMB-212ENST00000487890 ELOAQ14241 798 aaKnown RBP5.48□□□□□ -1.53
GPNMB-212ENST00000487890 BLOC1S3Q6QNY0 202 aa5.48□□□□□ -1.53
GPNMB-212ENST00000487890 RNF19BQ6ZMZ0 732 aa5.48□□□□□ -1.53
GPNMB-212ENST00000487890 FAM174AQ8TBP5 190 aa5.48□□□□□ -1.53
GPNMB-212ENST00000487890 NCAPD3P42695 1498 aa5.47□□□□□ -1.53
GPNMB-212ENST00000487890 BAZ1BQ9UIG0 1483 aaKnown RBP5.47□□□□□ -1.53
GPNMB-212ENST00000487890 USP17L3A6NCW0 530 aa5.47□□□□□ -1.53
GPNMB-212ENST00000487890 USP17L4A6NCW7 530 aa5.47□□□□□ -1.53
GPNMB-212ENST00000487890 Q3C1V9 767 aa5.47□□□□□ -1.53
GPNMB-212ENST00000487890 USP17L2Q6R6M4 530 aa5.47□□□□□ -1.53
GPNMB-212ENST00000487890 USP17L1Q7RTZ2 530 aa5.47□□□□□ -1.53
GPNMB-212ENST00000487890 LAPTM4BQ86VI4 370 aa5.47□□□□□ -1.53
GPNMB-212ENST00000487890 TXNDC2Q86VQ3 553 aa5.47□□□□□ -1.53
GPNMB-212ENST00000487890 NFATC2IPQ8NCF5 419 aa5.47□□□□□ -1.53
GPNMB-212ENST00000487890 SLAIN2Q9P270 581 aa5.47□□□□□ -1.53
GPNMB-212ENST00000487890 FKBPLQ9UIM3 349 aa5.47□□□□□ -1.53
GPNMB-212ENST00000487890 NOVA2Q9UNW9 492 aaKnown RBP5.47□□□□□ -1.53
GPNMB-212ENST00000487890 AMOTL2Q9Y2J4 779 aa5.47□□□□□ -1.53
GPNMB-212ENST00000487890 HMGXB3Q12766 1538 aa5.47□□□□□ -1.53
GPNMB-212ENST00000487890 USP17L5A8MUK1 530 aa5.46□□□□□ -1.54
GPNMB-212ENST00000487890 BHMG1C9JSJ3 638 aaPredicted RBP5.46□□□□□ -1.54
GPNMB-212ENST00000487890 F12P00748 615 aaPredicted RBP5.46□□□□□ -1.54
GPNMB-212ENST00000487890 VARS2Q5ST30 1063 aaKnown RBP5.46□□□□□ -1.54
GPNMB-212ENST00000487890 BRICD5Q6PL45 260 aa5.46□□□□□ -1.54
GPNMB-212ENST00000487890 DEPDC4Q8N2C3 294 aa5.46□□□□□ -1.54
GPNMB-212ENST00000487890 ZFRQ96KR1 1074 aaKnown RBP5.46□□□□□ -1.54
GPNMB-212ENST00000487890 USB1Q9BQ65 265 aaKnown RBP5.46□□□□□ -1.54
GPNMB-212ENST00000487890 MAP10Q9P2G4 905 aa5.46□□□□□ -1.54
GPNMB-212ENST00000487890 LOC105371045A0A1W2PR82 267 aa5.45□□□□□ -1.54
GPNMB-212ENST00000487890 CRTC2Q53ET0 693 aaPredicted RBP5.45□□□□□ -1.54
GPNMB-212ENST00000487890 PLEKHM2Q8IWE5 1019 aa5.45□□□□□ -1.54
GPNMB-212ENST00000487890 MKRN1Q9UHC7 482 aaKnown RBP5.45□□□□□ -1.54
GPNMB-212ENST00000487890 ERBB3P21860 1342 aa5.45□□□□□ -1.54
GPNMB-212ENST00000487890 IGSF3O75054 1194 aa5.44□□□□□ -1.54
GPNMB-212ENST00000487890 B4GALNT3Q6L9W6 998 aa5.44□□□□□ -1.54
GPNMB-212ENST00000487890 MROH2BQ7Z745 1585 aa5.44□□□□□ -1.54
GPNMB-212ENST00000487890 CCER1Q8TC90 406 aaPredicted RBP5.44□□□□□ -1.54
GPNMB-212ENST00000487890 CEP126Q9P2H0 1117 aa5.44□□□□□ -1.54
GPNMB-212ENST00000487890 UNCXA6NJT0 531 aa5.43□□□□□ -1.54
GPNMB-212ENST00000487890 FAM196BA6NMK8 535 aa5.43□□□□□ -1.54
GPNMB-212ENST00000487890 USP17L15C9J2P7 530 aa5.43□□□□□ -1.54
GPNMB-212ENST00000487890 USP17L10C9JJH3 530 aa5.43□□□□□ -1.54
GPNMB-212ENST00000487890 USP17L13C9JLJ4 530 aa5.43□□□□□ -1.54
GPNMB-212ENST00000487890 USP17L12C9JPN9 530 aa5.43□□□□□ -1.54
GPNMB-212ENST00000487890 USP17L11C9JVI0 530 aa5.43□□□□□ -1.54
GPNMB-212ENST00000487890 USP17L21D6R901 530 aa5.43□□□□□ -1.54
GPNMB-212ENST00000487890 USP17L18D6R9N7 530 aa5.43□□□□□ -1.54
GPNMB-212ENST00000487890 USP17L22D6RA61 530 aa5.43□□□□□ -1.54
GPNMB-212ENST00000487890 USP17L17D6RBQ6 530 aa5.43□□□□□ -1.54
GPNMB-212ENST00000487890 USP17L19D6RCP7 530 aa5.43□□□□□ -1.54
GPNMB-212ENST00000487890 USP17L20D6RJB6 530 aa5.43□□□□□ -1.54
GPNMB-212ENST00000487890 SSFA2P28290 1259 aa5.43□□□□□ -1.54
GPNMB-212ENST00000487890 FAM69CQ0P6D2 419 aa5.43□□□□□ -1.54
GPNMB-212ENST00000487890 USP17L24Q0WX57 530 aa5.43□□□□□ -1.54
GPNMB-212ENST00000487890 PTK7Q13308 1070 aa5.43□□□□□ -1.54
GPNMB-212ENST00000487890 SCUBE3Q8IX30 993 aa5.43□□□□□ -1.54
GPNMB-212ENST00000487890 PHTF2Q8N3S3 785 aa5.43□□□□□ -1.54
GPNMB-212ENST00000487890 THAP11Q96EK4 314 aa5.43□□□□□ -1.54
GPNMB-212ENST00000487890 OCSTAMPQ9BR26 566 aa5.43□□□□□ -1.54
GPNMB-212ENST00000487890 NBPF3Q9H094 633 aa5.43□□□□□ -1.54
GPNMB-212ENST00000487890 SALL2Q9Y467 1007 aaPredicted RBP5.43□□□□□ -1.54
GPNMB-212ENST00000487890 NESP48681 1621 aa5.43□□□□□ -1.54
GPNMB-212ENST00000487890 JUNDP17535 347 aa5.42□□□□□ -1.54
GPNMB-212ENST00000487890 RASA1P20936 1047 aa5.42□□□□□ -1.54
GPNMB-212ENST00000487890 ARID4AP29374 1257 aaPredicted RBP5.42□□□□□ -1.54
GPNMB-212ENST00000487890 CTHP32929 405 aa5.42□□□□□ -1.54
GPNMB-212ENST00000487890 PBX2P40425 430 aa5.42□□□□□ -1.54
GPNMB-212ENST00000487890 NCOA4Q13772 614 aa5.42□□□□□ -1.54
GPNMB-212ENST00000487890 PTPRNQ16849 979 aa5.42□□□□□ -1.54
GPNMB-212ENST00000487890 TSGA10IPQ3SY00 556 aa5.42□□□□□ -1.54
GPNMB-212ENST00000487890 LRCH3Q96II8 777 aa5.42□□□□□ -1.54
GPNMB-212ENST00000487890 CDCA7Q9BWT1 371 aaPredicted RBP5.42□□□□□ -1.54
GPNMB-212ENST00000487890 CDKN2AIPQ9NXV6 580 aaPredicted RBP5.42□□□□□ -1.54
GPNMB-212ENST00000487890 ZC3H4Q9UPT8 1303 aaKnown RBP5.42□□□□□ -1.54
GPNMB-212ENST00000487890 PEG3Q9GZU2 1588 aa5.42□□□□□ -1.54
GPNMB-212ENST00000487890 WIZO95785 1651 aa5.41□□□□□ -1.54
GPNMB-212ENST00000487890 FMNL1O95466 1100 aaPredicted RBP5.41□□□□□ -1.54
GPNMB-212ENST00000487890 SCNN1AP37088 669 aa5.41□□□□□ -1.54
GPNMB-212ENST00000487890 APLP1P51693 650 aa5.41□□□□□ -1.54
GPNMB-212ENST00000487890 KCNH2Q12809 1159 aa5.41□□□□□ -1.54
GPNMB-212ENST00000487890 SLFNL1Q499Z3 407 aa5.41□□□□□ -1.54
GPNMB-212ENST00000487890 NOM1Q5C9Z4 860 aaKnown RBP5.41□□□□□ -1.54
GPNMB-212ENST00000487890 LARP1Q6PKG0 1096 aaKnown RBP5.41□□□□□ -1.54
GPNMB-212ENST00000487890 MRPL50Q8N5N7 158 aaKnown RBP5.41□□□□□ -1.54
GPNMB-212ENST00000487890 FAM200AQ8TCP9 573 aa5.41□□□□□ -1.54
GPNMB-212ENST00000487890 OTUD5Q96G74 571 aa5.41□□□□□ -1.54
GPNMB-212ENST00000487890 PCDHB9Q9Y5E1 797 aa5.41□□□□□ -1.54
GPNMB-212ENST00000487890 KIF21AQ7Z4S6 1674 aa5.4□□□□□ -1.54
GPNMB-212ENST00000487890 CUX2O14529 1486 aa5.4□□□□□ -1.54
GPNMB-212ENST00000487890 DNAJC14Q6Y2X3 702 aaPredicted RBP5.4□□□□□ -1.54
GPNMB-212ENST00000487890 RNF135Q8IUD6 432 aa5.4□□□□□ -1.54
GPNMB-212ENST00000487890 ANKMY2Q8IV38 441 aa5.4□□□□□ -1.54
GPNMB-212ENST00000487890 ZNF687Q8N1G0 1237 aa5.4□□□□□ -1.54
GPNMB-212ENST00000487890 PLPP7Q8NBV4 271 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms