RNA–Protein interactions for RNA: ENST00000484767.5

SND1-211, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-211ENST00000484767 SIGLEC1Q9BZZ2 1709 aa11.69□□□□□ -0.54
SND1-211ENST00000484767 FAM69CQ0P6D2 419 aa11.68□□□□□ -0.54
SND1-211ENST00000484767 PDZRN3Q9UPQ7 1066 aa11.68□□□□□ -0.54
SND1-211ENST00000484767 COL3A1P02461 1466 aaPredicted RBP11.68□□□□□ -0.54
SND1-211ENST00000484767 VGFO15240 615 aaPredicted RBP11.67□□□□□ -0.54
SND1-211ENST00000484767 MTHFSP49914 203 aa11.67□□□□□ -0.54
SND1-211ENST00000484767 HDAC1Q13547 482 aaPredicted RBP11.67□□□□□ -0.54
SND1-211ENST00000484767 ANTXR1Q9H6X2 564 aa11.67□□□□□ -0.54
SND1-211ENST00000484767 ZNF219Q9P2Y4 722 aaPredicted RBP11.67□□□□□ -0.54
SND1-211ENST00000484767 NEO1Q92859 1461 aa11.66□□□□□ -0.54
SND1-211ENST00000484767 DZIP1LQ8IYY4 767 aaKnown RBP11.66□□□□□ -0.54
SND1-211ENST00000484767 DDX19BQ9UMR2 479 aa11.66□□□□□ -0.54
SND1-211ENST00000484767 PCDHB15Q9Y5E8 787 aa11.66□□□□□ -0.54
SND1-211ENST00000484767 ATAD2Q6PL18 1390 aa11.66□□□□□ -0.54
SND1-211ENST00000484767 CFAP65Q6ZU64 1925 aaKnown RBP11.65□□□□□ -0.54
SND1-211ENST00000484767 FBXO41Q8TF61 875 aa11.65□□□□□ -0.54
SND1-211ENST00000484767 ZNF428Q96B54 188 aa11.65□□□□□ -0.54
SND1-211ENST00000484767 SLC12A5Q9H2X9 1139 aa11.65□□□□□ -0.54
SND1-211ENST00000484767 CHMP4BQ9H444 224 aaKnown RBP11.65□□□□□ -0.54
SND1-211ENST00000484767 BRPF3Q9ULD4 1205 aa11.65□□□□□ -0.54
SND1-211ENST00000484767 EIF5BO60841 1220 aaKnown RBP11.64□□□□□ -0.55
SND1-211ENST00000484767 TRAK1Q9UPV9 953 aa11.64□□□□□ -0.55
SND1-211ENST00000484767 KIF16BQ96L93 1317 aa11.63□□□□□ -0.55
SND1-211ENST00000484767 SEC24BO95487 1268 aa11.63□□□□□ -0.55
SND1-211ENST00000484767 RLBP1P12271 317 aa11.63□□□□□ -0.55
SND1-211ENST00000484767 BRPF1P55201 1214 aaPredicted RBP11.63□□□□□ -0.55
SND1-211ENST00000484767 FTSJ3Q8IY81 847 aaKnown RBP11.63□□□□□ -0.55
SND1-211ENST00000484767 ISY1Q9ULR0 285 aaKnown RBP11.63□□□□□ -0.55
SND1-211ENST00000484767 DIP2CQ9Y2E4 1556 aa11.62□□□□□ -0.55
SND1-211ENST00000484767 PREX1Q8TCU6 1659 aa11.62□□□□□ -0.55
SND1-211ENST00000484767 PPIP5K1Q6PFW1 1433 aa11.62□□□□□ -0.55
SND1-211ENST00000484767 IPO8O15397 1037 aaKnown RBP11.62□□□□□ -0.55
SND1-211ENST00000484767 PTMSP20962 102 aa11.62□□□□□ -0.55
SND1-211ENST00000484767 ALDH1L2Q3SY69 923 aa11.62□□□□□ -0.55
SND1-211ENST00000484767 SMC5Q8IY18 1101 aa11.62□□□□□ -0.55
SND1-211ENST00000484767 TBC1D2Q9BYX2 928 aa11.62□□□□□ -0.55
SND1-211ENST00000484767 RSPH6AQ9H0K4 717 aa11.62□□□□□ -0.55
SND1-211ENST00000484767 CHMP5Q9NZZ3 219 aa11.62□□□□□ -0.55
SND1-211ENST00000484767 TMEM131LA2VDJ0 1609 aa11.61□□□□□ -0.55
SND1-211ENST00000484767 U2AF1L5P0DN76 240 aaPredicted RBP11.61□□□□□ -0.55
SND1-211ENST00000484767 DSG3P32926 999 aa11.61□□□□□ -0.55
SND1-211ENST00000484767 U2AF1Q01081 240 aaKnown RBP eCLIP11.61□□□□□ -0.55
SND1-211ENST00000484767 PLEKHF1Q96S99 279 aa11.61□□□□□ -0.55
SND1-211ENST00000484767 CD109Q6YHK3 1445 aa11.6□□□□□ -0.55
SND1-211ENST00000484767 NCOA3Q9Y6Q9 1424 aa11.6□□□□□ -0.55
SND1-211ENST00000484767 MYO5BQ9ULV0 1848 aa11.6□□□□□ -0.55
SND1-211ENST00000484767 PTPRMP28827 1452 aa11.6□□□□□ -0.55
SND1-211ENST00000484767 PNPLA6Q8IY17 1366 aa11.6□□□□□ -0.55
SND1-211ENST00000484767 CHGAP10645 457 aaKnown RBP11.6□□□□□ -0.55
SND1-211ENST00000484767 TMPOP42166 694 aaKnown RBP11.6□□□□□ -0.55
SND1-211ENST00000484767 NEUROD2Q15784 382 aa11.6□□□□□ -0.55
SND1-211ENST00000484767 ATF7IPQ6VMQ6 1270 aa11.6□□□□□ -0.55
SND1-211ENST00000484767 TERF2IPQ9NYB0 399 aa11.6□□□□□ -0.55
SND1-211ENST00000484767 RRP7AQ9Y3A4 280 aaKnown RBP11.6□□□□□ -0.55
SND1-211ENST00000484767 RICTORQ6R327 1708 aa11.6□□□□□ -0.55
SND1-211ENST00000484767 DLC1Q96QB1 1528 aa11.6□□□□□ -0.55
SND1-211ENST00000484767 A0A1W2PP64 1363 aa11.59□□□□□ -0.55
SND1-211ENST00000484767 SNX21Q969T3 373 aa11.59□□□□□ -0.55
SND1-211ENST00000484767 CFAP44Q96MT7 982 aa11.59□□□□□ -0.55
SND1-211ENST00000484767 C22orf23Q9BZE7 217 aa11.59□□□□□ -0.55
SND1-211ENST00000484767 SLC52A1Q9NWF4 448 aa11.59□□□□□ -0.55
SND1-211ENST00000484767 CIZ1Q9ULV3 898 aaPredicted RBP11.59□□□□□ -0.55
SND1-211ENST00000484767 DDX11L8A8MPP1 907 aa11.58□□□□□ -0.56
SND1-211ENST00000484767 MCM4P33991 863 aa11.58□□□□□ -0.56
SND1-211ENST00000484767 RTN4Q9NQC3 1192 aaKnown RBP11.58□□□□□ -0.56
SND1-211ENST00000484767 SMC4Q9NTJ3 1288 aa11.58□□□□□ -0.56
SND1-211ENST00000484767 PIK3R4Q99570 1358 aa11.57□□□□□ -0.56
SND1-211ENST00000484767 NPM1P06748 294 aaKnown RBP eCLIP11.57□□□□□ -0.56
SND1-211ENST00000484767 RBM25P49756 843 aaKnown RBP11.57□□□□□ -0.56
SND1-211ENST00000484767 CALD1Q05682 793 aaKnown RBP11.57□□□□□ -0.56
SND1-211ENST00000484767 EXOSC9Q06265 439 aaKnown RBP11.57□□□□□ -0.56
SND1-211ENST00000484767 ARHGAP45Q92619 1136 aa11.57□□□□□ -0.56
SND1-211ENST00000484767 ANO8Q9HCE9 1232 aaPredicted RBP11.57□□□□□ -0.56
SND1-211ENST00000484767 POGKQ9P215 609 aa11.57□□□□□ -0.56
SND1-211ENST00000484767 TRIM35Q9UPQ4 493 aa11.57□□□□□ -0.56
SND1-211ENST00000484767 ATP7BP35670 1465 aa11.57□□□□□ -0.56
SND1-211ENST00000484767 CD163L1Q9NR16 1453 aa11.57□□□□□ -0.56
SND1-211ENST00000484767 FSD2A1L4K1 749 aa11.56□□□□□ -0.56
SND1-211ENST00000484767 TRIM27P14373 513 aa11.56□□□□□ -0.56
SND1-211ENST00000484767 TNNT2P45379 298 aaPredicted RBP11.56□□□□□ -0.56
SND1-211ENST00000484767 TMEM132EQ6IEE7 984 aa11.56□□□□□ -0.56
SND1-211ENST00000484767 HSCBQ8IWL3 235 aa11.56□□□□□ -0.56
SND1-211ENST00000484767 SLKQ9H2G2 1235 aaPredicted RBP11.56□□□□□ -0.56
SND1-211ENST00000484767 ZBTB40Q9NUA8 1239 aa11.56□□□□□ -0.56
SND1-211ENST00000484767 TNNQ9UQP3 1299 aa11.56□□□□□ -0.56
SND1-211ENST00000484767 KIF24Q5T7B8 1368 aa11.55□□□□□ -0.56
SND1-211ENST00000484767 PTCH1Q13635 1447 aa11.55□□□□□ -0.56
SND1-211ENST00000484767 FAM135BQ49AJ0 1406 aa11.55□□□□□ -0.56
SND1-211ENST00000484767 GOLGA6L3A6NEY3 463 aa11.55□□□□□ -0.56
SND1-211ENST00000484767 FCHSD2O94868 740 aa11.55□□□□□ -0.56
SND1-211ENST00000484767 NUCB1Q02818 461 aa11.55□□□□□ -0.56
SND1-211ENST00000484767 HDGFL2Q7Z4V5 671 aaPredicted RBP11.55□□□□□ -0.56
SND1-211ENST00000484767 SSH1Q8WYL5 1049 aa11.55□□□□□ -0.56
SND1-211ENST00000484767 LRRC7Q96NW7 1537 aa11.55□□□□□ -0.56
SND1-211ENST00000484767 DIP2BQ9P265 1576 aa11.54□□□□□ -0.56
SND1-211ENST00000484767 YTHDC2Q9H6S0 1430 aaKnown RBP11.54□□□□□ -0.56
SND1-211ENST00000484767 DIAPH1O60610 1272 aaKnown RBP11.54□□□□□ -0.56
SND1-211ENST00000484767 ITPRIPQ8IWB1 547 aa11.54□□□□□ -0.56
SND1-211ENST00000484767 GCC1Q96CN9 775 aa11.54□□□□□ -0.56
SND1-211ENST00000484767 ARHGEF40Q8TER5 1519 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms