RNA–Protein interactions for RNA: ENST00000484556.1

DDR1-245, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 2

Gene DDR1, Length 1,038 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-245ENST00000484556 FAM196AQ6ZSG2 479 aa27.22■■□□□ 1.95
DDR1-245ENST00000484556 SAFB2Q14151 953 aaKnown RBP eCLIP27.21■■□□□ 1.95
DDR1-245ENST00000484556 SLC4A1APQ9BWU0 796 aaKnown RBP27.21■■□□□ 1.95
DDR1-245ENST00000484556 NINLQ9Y2I6 1382 aa27.2■■□□□ 1.94
DDR1-245ENST00000484556 SPON1Q9HCB6 807 aa27.19■■□□□ 1.94
DDR1-245ENST00000484556 PPARGC1BQ86YN6 1023 aaKnown RBP27.18■■□□□ 1.94
DDR1-245ENST00000484556 ANKRD30BQ9BXX2 1392 aa27.18■■□□□ 1.94
DDR1-245ENST00000484556 SPATA31A1Q5TZJ5 1347 aa27.17■■□□□ 1.94
DDR1-245ENST00000484556 SPATA31E1Q6ZUB1 1445 aa27.17■■□□□ 1.94
DDR1-245ENST00000484556 NBPF8Q3BBV2 869 aa27.17■■□□□ 1.94
DDR1-245ENST00000484556 NBPF14Q5TI25 921 aa27.17■■□□□ 1.94
DDR1-245ENST00000484556 PRDM11Q9NQV5 511 aa27.16■■□□□ 1.94
DDR1-245ENST00000484556 KCNQ2O43526 872 aa27.15■■□□□ 1.94
DDR1-245ENST00000484556 ANKARQ7Z5J8 1434 aa27.15■■□□□ 1.94
DDR1-245ENST00000484556 SIRT1Q96EB6 747 aa27.14■■□□□ 1.94
DDR1-245ENST00000484556 PRAM1Q96QH2 718 aa27.13■■□□□ 1.93
DDR1-245ENST00000484556 STRN4Q9NRL3 753 aa27.13■■□□□ 1.93
DDR1-245ENST00000484556 GPRASP1Q5JY77 1395 aa27.11■■□□□ 1.93
DDR1-245ENST00000484556 SENP3-EIF4A1A0A087X0R7 540 aa27.11■■□□□ 1.93
DDR1-245ENST00000484556 CHRNA2Q15822 529 aa27.1■■□□□ 1.93
DDR1-245ENST00000484556 ZNF784Q8NCA9 323 aaPredicted RBP27.1■■□□□ 1.93
DDR1-245ENST00000484556 USP35Q9P2H5 1018 aa27.1■■□□□ 1.93
DDR1-245ENST00000484556 ACIN1Q9UKV3 1341 aaKnown RBP27.1■■□□□ 1.93
DDR1-245ENST00000484556 NRKQ7Z2Y5 1582 aa27.09■■□□□ 1.93
DDR1-245ENST00000484556 KIAA0232Q92628 1395 aa27.09■■□□□ 1.93
DDR1-245ENST00000484556 PHRF1Q9P1Y6 1649 aaKnown RBP27.08■■□□□ 1.93
DDR1-245ENST00000484556 PDE3BQ13370 1112 aa27.07■■□□□ 1.92
DDR1-245ENST00000484556 PAK3O75914 559 aaPredicted RBP27.06■■□□□ 1.92
DDR1-245ENST00000484556 DHX57Q6P158 1386 aaKnown RBP27.06■■□□□ 1.92
DDR1-245ENST00000484556 CASZ1Q86V15 1759 aa27.04■■□□□ 1.92
DDR1-245ENST00000484556 CFAP70Q5T0N1 1121 aa27.04■■□□□ 1.92
DDR1-245ENST00000484556 HIRIP3Q9BW71 556 aaPredicted RBP27.04■■□□□ 1.92
DDR1-245ENST00000484556 C14orf93Q9H972 538 aaKnown RBP27.04■■□□□ 1.92
DDR1-245ENST00000484556 PRR36Q9H6K5 1346 aa27.04■■□□□ 1.92
DDR1-245ENST00000484556 UTRNP46939 3433 aa27.03■■□□□ 1.92
DDR1-245ENST00000484556 MYOM1P52179 1685 aa27.03■■□□□ 1.92
DDR1-245ENST00000484556 POGKQ9P215 609 aa27.03■■□□□ 1.92
DDR1-245ENST00000484556 DLC1Q96QB1 1528 aa27.01■■□□□ 1.91
DDR1-245ENST00000484556 IFFO2Q5TF58 517 aa27.01■■□□□ 1.91
DDR1-245ENST00000484556 TULP4Q9NRJ4 1543 aa27■■□□□ 1.91
DDR1-245ENST00000484556 SSH2Q76I76 1423 aa26.99■■□□□ 1.91
DDR1-245ENST00000484556 ZC3H6P61129 1189 aaKnown RBP26.98■■□□□ 1.91
DDR1-245ENST00000484556 BARGINQ6ZT62 677 aa26.98■■□□□ 1.91
DDR1-245ENST00000484556 NGDNQ8NEJ9 315 aaKnown RBP26.98■■□□□ 1.91
DDR1-245ENST00000484556 ANO8Q9HCE9 1232 aaPredicted RBP26.97■■□□□ 1.91
DDR1-245ENST00000484556 RGPD3A6NKT7 1758 aaPredicted RBP26.97■■□□□ 1.91
DDR1-245ENST00000484556 RGPD4Q7Z3J3 1758 aa26.97■■□□□ 1.91
DDR1-245ENST00000484556 PDGFDQ9GZP0 370 aaPredicted RBP26.96■■□□□ 1.91
DDR1-245ENST00000484556 MINK1Q8N4C8 1332 aaPredicted RBP26.95■■□□□ 1.91
DDR1-245ENST00000484556 EVA1CP58658 441 aa26.95■■□□□ 1.9
DDR1-245ENST00000484556 C1QTNF8P60827 252 aa26.95■■□□□ 1.9
DDR1-245ENST00000484556 PARP4Q9UKK3 1724 aaKnown RBP26.94■■□□□ 1.9
DDR1-245ENST00000484556 NUTM2GQ5VZR2 741 aa26.94■■□□□ 1.9
DDR1-245ENST00000484556 LARP1Q6PKG0 1096 aaKnown RBP26.94■■□□□ 1.9
DDR1-245ENST00000484556 EIF3AQ14152 1382 aaKnown RBP26.94■■□□□ 1.9
DDR1-245ENST00000484556 CHD4Q14839 1912 aa26.93■■□□□ 1.9
DDR1-245ENST00000484556 ZBTB7AO95365 584 aa26.93■■□□□ 1.9
DDR1-245ENST00000484556 PEAK1Q9H792 1746 aa26.91■■□□□ 1.9
DDR1-245ENST00000484556 SBF2Q86WG5 1849 aa26.91■■□□□ 1.9
DDR1-245ENST00000484556 TCP11L2Q8N4U5 519 aa26.91■■□□□ 1.9
DDR1-245ENST00000484556 ITSN1Q15811 1721 aa26.9■■□□□ 1.9
DDR1-245ENST00000484556 LMO7Q8WWI1 1683 aa26.9■■□□□ 1.9
DDR1-245ENST00000484556 TRAK1Q9UPV9 953 aa26.89■■□□□ 1.9
DDR1-245ENST00000484556 ADGRB1O14514 1584 aa26.88■■□□□ 1.89
DDR1-245ENST00000484556 PTGER2P43116 358 aa26.88■■□□□ 1.89
DDR1-245ENST00000484556 ATP7BP35670 1465 aa26.87■■□□□ 1.89
DDR1-245ENST00000484556 WASLO00401 505 aaPredicted RBP26.87■■□□□ 1.89
DDR1-245ENST00000484556 ATF5Q9Y2D1 282 aaPredicted RBP26.87■■□□□ 1.89
DDR1-245ENST00000484556 OVOS2A0A0G2JMS6 1433 aa26.86■■□□□ 1.89
DDR1-245ENST00000484556 OVOS2A0A0J9YW53 1432 aa26.86■■□□□ 1.89
DDR1-245ENST00000484556 OVOS2Q6IE36 1432 aa26.86■■□□□ 1.89
DDR1-245ENST00000484556 FHDC1Q9C0D6 1143 aaPredicted RBP26.85■■□□□ 1.89
DDR1-245ENST00000484556 LRRC37A3O60309 1634 aa26.84■■□□□ 1.89
DDR1-245ENST00000484556 PTF1AQ7RTS3 328 aa26.83■■□□□ 1.89
DDR1-245ENST00000484556 MPHOSPH9Q99550 1183 aa26.83■■□□□ 1.89
DDR1-245ENST00000484556 BCL11BQ9C0K0 894 aaPredicted RBP26.83■■□□□ 1.89
DDR1-245ENST00000484556 PLSCR1O15162 318 aa26.82■■□□□ 1.88
DDR1-245ENST00000484556 SYT17Q9BSW7 474 aa26.82■■□□□ 1.88
DDR1-245ENST00000484556 THRAP3Q9Y2W1 955 aaKnown RBP26.8■■□□□ 1.88
DDR1-245ENST00000484556 COL5A2P05997 1499 aaPredicted RBP26.79■■□□□ 1.88
DDR1-245ENST00000484556 PROM2Q8N271 834 aa26.78■■□□□ 1.88
DDR1-245ENST00000484556 CPDO75976 1380 aa26.77■■□□□ 1.88
DDR1-245ENST00000484556 C11orf95C9JLR9 678 aaPredicted RBP26.77■■□□□ 1.88
DDR1-245ENST00000484556 NUDT16Q96DE0 195 aaKnown RBP26.76■■□□□ 1.87
DDR1-245ENST00000484556 TOPAZ1Q8N9V7 1692 aa26.75■■□□□ 1.87
DDR1-245ENST00000484556 CRB1P82279 1406 aa26.73■■□□□ 1.87
DDR1-245ENST00000484556 ARHGEF28Q8N1W1 1705 aaKnown RBP26.73■■□□□ 1.87
DDR1-245ENST00000484556 WNK3Q9BYP7 1800 aa26.73■■□□□ 1.87
DDR1-245ENST00000484556 AKAP12Q02952 1782 aa26.72■■□□□ 1.87
DDR1-245ENST00000484556 STK32BQ9NY57 414 aa26.72■■□□□ 1.87
DDR1-245ENST00000484556 CEP350Q5VT06 3117 aa26.72■■□□□ 1.87
DDR1-245ENST00000484556 USP19O94966 1318 aa26.71■■□□□ 1.87
DDR1-245ENST00000484556 ACEP12821 1306 aa26.71■■□□□ 1.87
DDR1-245ENST00000484556 GIGYF1O75420 1035 aaPredicted RBP26.71■■□□□ 1.87
DDR1-245ENST00000484556 ABTB2Q8N961 1025 aa26.71■■□□□ 1.87
DDR1-245ENST00000484556 DDB1Q16531 1140 aa26.7■■□□□ 1.86
DDR1-245ENST00000484556 SGIP1Q9BQI5 828 aa26.7■■□□□ 1.86
DDR1-245ENST00000484556 POLR3AO14802 1390 aaPredicted RBP26.7■■□□□ 1.86
DDR1-245ENST00000484556 ZBTB7CA1YPR0 619 aa26.69■■□□□ 1.86
DDR1-245ENST00000484556 MTFR1LQ9H019 292 aa26.69■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms