RNA–Protein interactions for RNA: ENST00000483062.5

SYN3-212, Transcript of synapsin III, humanhuman

TSL 3

Gene SYN3, Length 827 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-212ENST00000483062 RGPD1P0DJD0 1748 aa11.84□□□□□ -0.51
SYN3-212ENST00000483062 ABCA3Q99758 1704 aa11.84□□□□□ -0.51
SYN3-212ENST00000483062 TRIM37O94972 964 aa11.84□□□□□ -0.51
SYN3-212ENST00000483062 FAM196AQ6ZSG2 479 aa11.84□□□□□ -0.51
SYN3-212ENST00000483062 PIK3C2GO75747 1445 aa11.84□□□□□ -0.51
SYN3-212ENST00000483062 TNS1Q9HBL0 1735 aaKnown RBP11.83□□□□□ -0.52
SYN3-212ENST00000483062 IFT172Q9UG01 1749 aa11.83□□□□□ -0.52
SYN3-212ENST00000483062 PLEKHG5O94827 1062 aa11.83□□□□□ -0.52
SYN3-212ENST00000483062 PPARGC1BQ86YN6 1023 aaKnown RBP11.83□□□□□ -0.52
SYN3-212ENST00000483062 SPATA31A1Q5TZJ5 1347 aa11.83□□□□□ -0.52
SYN3-212ENST00000483062 APBA3O96018 575 aa11.82□□□□□ -0.52
SYN3-212ENST00000483062 LMOD2Q6P5Q4 547 aa11.82□□□□□ -0.52
SYN3-212ENST00000483062 C14orf93Q9H972 538 aaKnown RBP11.82□□□□□ -0.52
SYN3-212ENST00000483062 KNDC1Q76NI1 1749 aa11.82□□□□□ -0.52
SYN3-212ENST00000483062 NINLQ9Y2I6 1382 aa11.81□□□□□ -0.52
SYN3-212ENST00000483062 ANKARQ7Z5J8 1434 aa11.81□□□□□ -0.52
SYN3-212ENST00000483062 PMFBP1Q8TBY8 1022 aa11.81□□□□□ -0.52
SYN3-212ENST00000483062 KCNQ2O43526 872 aa11.8□□□□□ -0.52
SYN3-212ENST00000483062 SPON1Q9HCB6 807 aa11.8□□□□□ -0.52
SYN3-212ENST00000483062 COL14A1Q05707 1796 aaKnown RBP11.79□□□□□ -0.52
SYN3-212ENST00000483062 RGL3Q3MIN7 710 aa11.79□□□□□ -0.52
SYN3-212ENST00000483062 ACIN1Q9UKV3 1341 aaKnown RBP11.79□□□□□ -0.52
SYN3-212ENST00000483062 TRPM3Q9HCF6 1732 aaPredicted RBP11.78□□□□□ -0.52
SYN3-212ENST00000483062 BARGINQ6ZT62 677 aa11.78□□□□□ -0.52
SYN3-212ENST00000483062 PRAM1Q96QH2 718 aa11.78□□□□□ -0.52
SYN3-212ENST00000483062 ADGRB2O60241 1585 aa11.78□□□□□ -0.52
SYN3-212ENST00000483062 PRR36Q9H6K5 1346 aa11.78□□□□□ -0.52
SYN3-212ENST00000483062 NBPF8Q3BBV2 869 aa11.77□□□□□ -0.53
SYN3-212ENST00000483062 NBPF14Q5TI25 921 aa11.77□□□□□ -0.53
SYN3-212ENST00000483062 ZNF784Q8NCA9 323 aaPredicted RBP11.77□□□□□ -0.53
SYN3-212ENST00000483062 PRDM11Q9NQV5 511 aa11.77□□□□□ -0.53
SYN3-212ENST00000483062 FOXD4L1Q9NU39 408 aa11.77□□□□□ -0.53
SYN3-212ENST00000483062 ALS2Q96Q42 1657 aa11.77□□□□□ -0.53
SYN3-212ENST00000483062 RGPD8O14715 1765 aaPredicted RBP11.77□□□□□ -0.53
SYN3-212ENST00000483062 RREB1Q92766 1687 aa11.76□□□□□ -0.53
SYN3-212ENST00000483062 CFAP70Q5T0N1 1121 aa11.76□□□□□ -0.53
SYN3-212ENST00000483062 DHX57Q6P158 1386 aaKnown RBP11.76□□□□□ -0.53
SYN3-212ENST00000483062 SPINK5Q9NQ38 1064 aaPredicted RBP11.75□□□□□ -0.53
SYN3-212ENST00000483062 GPRASP1Q5JY77 1395 aa11.75□□□□□ -0.53
SYN3-212ENST00000483062 KIAA0232Q92628 1395 aa11.75□□□□□ -0.53
SYN3-212ENST00000483062 MYCNP04198 464 aaPredicted RBP11.74□□□□□ -0.53
SYN3-212ENST00000483062 SAFB2Q14151 953 aaKnown RBP eCLIP11.74□□□□□ -0.53
SYN3-212ENST00000483062 DLC1Q96QB1 1528 aa11.74□□□□□ -0.53
SYN3-212ENST00000483062 NUP188Q5SRE5 1749 aa11.74□□□□□ -0.53
SYN3-212ENST00000483062 CRYBG1Q9Y4K1 1723 aa11.74□□□□□ -0.53
SYN3-212ENST00000483062 CHRNA2Q15822 529 aa11.73□□□□□ -0.53
SYN3-212ENST00000483062 IFFO2Q5TF58 517 aa11.73□□□□□ -0.53
SYN3-212ENST00000483062 PPP1R1BQ9UD71 204 aaPredicted RBP11.73□□□□□ -0.53
SYN3-212ENST00000483062 PLSCR1O15162 318 aa11.72□□□□□ -0.53
SYN3-212ENST00000483062 CAPN15O75808 1086 aa11.72□□□□□ -0.53
SYN3-212ENST00000483062 PTGER2P43116 358 aa11.72□□□□□ -0.53
SYN3-212ENST00000483062 PDE3BQ13370 1112 aa11.72□□□□□ -0.53
SYN3-212ENST00000483062 ANO8Q9HCE9 1232 aaPredicted RBP11.72□□□□□ -0.53
SYN3-212ENST00000483062 SSH2Q76I76 1423 aa11.71□□□□□ -0.53
SYN3-212ENST00000483062 PDGFDQ9GZP0 370 aaPredicted RBP11.71□□□□□ -0.53
SYN3-212ENST00000483062 STRN4Q9NRL3 753 aa11.71□□□□□ -0.53
SYN3-212ENST00000483062 CEP350Q5VT06 3117 aa11.71□□□□□ -0.53
SYN3-212ENST00000483062 WASLO00401 505 aaPredicted RBP11.7□□□□□ -0.54
SYN3-212ENST00000483062 ZBTB22O15209 634 aa11.7□□□□□ -0.54
SYN3-212ENST00000483062 C1QTNF8P60827 252 aa11.7□□□□□ -0.54
SYN3-212ENST00000483062 LARP1Q6PKG0 1096 aaKnown RBP11.7□□□□□ -0.54
SYN3-212ENST00000483062 SAMD1Q6SPF0 538 aaPredicted RBP11.7□□□□□ -0.54
SYN3-212ENST00000483062 PROM2Q8N271 834 aa11.7□□□□□ -0.54
SYN3-212ENST00000483062 TCP11L2Q8N4U5 519 aa11.7□□□□□ -0.54
SYN3-212ENST00000483062 MPHOSPH9Q99550 1183 aa11.7□□□□□ -0.54
SYN3-212ENST00000483062 HIRIP3Q9BW71 556 aaPredicted RBP11.7□□□□□ -0.54
SYN3-212ENST00000483062 POGKQ9P215 609 aa11.7□□□□□ -0.54
SYN3-212ENST00000483062 THRAP3Q9Y2W1 955 aaKnown RBP11.7□□□□□ -0.54
SYN3-212ENST00000483062 TULP4Q9NRJ4 1543 aa11.7□□□□□ -0.54
SYN3-212ENST00000483062 ZC3H6P61129 1189 aaKnown RBP11.69□□□□□ -0.54
SYN3-212ENST00000483062 USP35Q9P2H5 1018 aa11.69□□□□□ -0.54
SYN3-212ENST00000483062 ADGRB1O14514 1584 aa11.69□□□□□ -0.54
SYN3-212ENST00000483062 CAMTA1Q9Y6Y1 1673 aa11.68□□□□□ -0.54
SYN3-212ENST00000483062 CPDO75976 1380 aa11.68□□□□□ -0.54
SYN3-212ENST00000483062 EIF3AQ14152 1382 aaKnown RBP11.68□□□□□ -0.54
SYN3-212ENST00000483062 C11orf95C9JLR9 678 aaPredicted RBP11.68□□□□□ -0.54
SYN3-212ENST00000483062 PAK3O75914 559 aaPredicted RBP11.68□□□□□ -0.54
SYN3-212ENST00000483062 DSG3P32926 999 aa11.68□□□□□ -0.54
SYN3-212ENST00000483062 NGDNQ8NEJ9 315 aaKnown RBP11.68□□□□□ -0.54
SYN3-212ENST00000483062 SGIP1Q9BQI5 828 aa11.68□□□□□ -0.54
SYN3-212ENST00000483062 MINK1Q8N4C8 1332 aaPredicted RBP11.67□□□□□ -0.54
SYN3-212ENST00000483062 SENP3-EIF4A1A0A087X0R7 540 aa11.67□□□□□ -0.54
SYN3-212ENST00000483062 PTF1AQ7RTS3 328 aa11.67□□□□□ -0.54
SYN3-212ENST00000483062 EVA1CP58658 441 aa11.66□□□□□ -0.54
SYN3-212ENST00000483062 SYT17Q9BSW7 474 aa11.66□□□□□ -0.54
SYN3-212ENST00000483062 TRAK1Q9UPV9 953 aa11.66□□□□□ -0.54
SYN3-212ENST00000483062 CASZ1Q86V15 1759 aa11.66□□□□□ -0.54
SYN3-212ENST00000483062 POLR3AO14802 1390 aaPredicted RBP11.66□□□□□ -0.54
SYN3-212ENST00000483062 USP19O94966 1318 aa11.65□□□□□ -0.54
SYN3-212ENST00000483062 ZBTB7AO95365 584 aa11.65□□□□□ -0.54
SYN3-212ENST00000483062 NUDT16Q96DE0 195 aaKnown RBP11.65□□□□□ -0.54
SYN3-212ENST00000483062 BCL11BQ9C0K0 894 aaPredicted RBP11.65□□□□□ -0.54
SYN3-212ENST00000483062 BCL9O00512 1426 aa11.65□□□□□ -0.54
SYN3-212ENST00000483062 ATP7BP35670 1465 aa11.64□□□□□ -0.55
SYN3-212ENST00000483062 PEAK1Q9H792 1746 aa11.64□□□□□ -0.55
SYN3-212ENST00000483062 NRKQ7Z2Y5 1582 aa11.64□□□□□ -0.55
SYN3-212ENST00000483062 FHDC1Q9C0D6 1143 aaPredicted RBP11.64□□□□□ -0.55
SYN3-212ENST00000483062 LMO7Q8WWI1 1683 aa11.64□□□□□ -0.55
SYN3-212ENST00000483062 OVOS2A0A0G2JMS6 1433 aa11.63□□□□□ -0.55
SYN3-212ENST00000483062 OVOS2A0A0J9YW53 1432 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms