RNA–Protein interactions for RNA: ENST00000477676.6

CKS1B-207, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-207ENST00000477676 GPR37O15354 613 aa8.61□□□□□ -1.03
CKS1B-207ENST00000477676 SMYD5Q6GMV2 418 aa8.61□□□□□ -1.03
CKS1B-207ENST00000477676 BMP1P13497 986 aa8.6□□□□□ -1.03
CKS1B-207ENST00000477676 ERBB4Q15303 1308 aa8.59□□□□□ -1.03
CKS1B-207ENST00000477676 H3BM21 787 aa8.59□□□□□ -1.03
CKS1B-207ENST00000477676 SIAH2O43255 324 aa8.58□□□□□ -1.04
CKS1B-207ENST00000477676 CLASP1Q7Z460 1538 aa8.58□□□□□ -1.04
CKS1B-207ENST00000477676 TESPA1A2RU30 521 aaPredicted RBP8.57□□□□□ -1.04
CKS1B-207ENST00000477676 CAPN5O15484 640 aaPredicted RBP8.57□□□□□ -1.04
CKS1B-207ENST00000477676 WDR97A6NE52 1622 aa8.57□□□□□ -1.04
CKS1B-207ENST00000477676 TDRD9Q8NDG6 1382 aaKnown RBP8.57□□□□□ -1.04
CKS1B-207ENST00000477676 CUX1P39880 1505 aa8.56□□□□□ -1.04
CKS1B-207ENST00000477676 SNAPC4Q5SXM2 1469 aa8.56□□□□□ -1.04
CKS1B-207ENST00000477676 FGD5Q6ZNL6 1462 aa8.56□□□□□ -1.04
CKS1B-207ENST00000477676 SOGA1O94964 1423 aa8.55□□□□□ -1.04
CKS1B-207ENST00000477676 KDM4AO75164 1064 aa8.55□□□□□ -1.04
CKS1B-207ENST00000477676 CD46P15529 392 aa8.55□□□□□ -1.04
CKS1B-207ENST00000477676 SUZ12Q15022 739 aaKnown RBP8.55□□□□□ -1.04
CKS1B-207ENST00000477676 HLA-CQ95604 372 aa8.55□□□□□ -1.04
CKS1B-207ENST00000477676 WASF2Q9Y6W5 498 aa8.54□□□□□ -1.04
CKS1B-207ENST00000477676 PBRM1Q86U86 1689 aa8.53□□□□□ -1.04
CKS1B-207ENST00000477676 PTCRAQ6ISU1 281 aaPredicted RBP8.53□□□□□ -1.04
CKS1B-207ENST00000477676 EHBP1Q8NDI1 1231 aa8.53□□□□□ -1.04
CKS1B-207ENST00000477676 ZFP42Q96MM3 310 aa8.52□□□□□ -1.05
CKS1B-207ENST00000477676 JUNDP17535 347 aa8.51□□□□□ -1.05
CKS1B-207ENST00000477676 SYNJ1O43426 1573 aa8.51□□□□□ -1.05
CKS1B-207ENST00000477676 MAGI1Q96QZ7 1491 aaPredicted RBP8.51□□□□□ -1.05
CKS1B-207ENST00000477676 USP46P62068 366 aa8.5□□□□□ -1.05
CKS1B-207ENST00000477676 PLCB2Q00722 1185 aa8.5□□□□□ -1.05
CKS1B-207ENST00000477676 SYMPKQ92797 1274 aaKnown RBP8.49□□□□□ -1.05
CKS1B-207ENST00000477676 GRIN2BQ13224 1484 aa8.49□□□□□ -1.05
CKS1B-207ENST00000477676 ERCC6L2Q5T890 1561 aa8.48□□□□□ -1.05
CKS1B-207ENST00000477676 ABCA5Q8WWZ7 1642 aa8.48□□□□□ -1.05
CKS1B-207ENST00000477676 NUDT12Q9BQG2 462 aa8.48□□□□□ -1.05
CKS1B-207ENST00000477676 SYNJ2O15056 1496 aa8.48□□□□□ -1.05
CKS1B-207ENST00000477676 TULP1O00294 542 aaPredicted RBP8.47□□□□□ -1.05
CKS1B-207ENST00000477676 HOXA2O43364 376 aa8.47□□□□□ -1.05
CKS1B-207ENST00000477676 SH3BP2P78314 561 aa8.47□□□□□ -1.05
CKS1B-207ENST00000477676 GUCA2AQ02747 115 aa8.47□□□□□ -1.05
CKS1B-207ENST00000477676 KCTD17Q8N5Z5 321 aa8.46□□□□□ -1.06
CKS1B-207ENST00000477676 CHMP7Q8WUX9 453 aaPredicted RBP8.46□□□□□ -1.06
CKS1B-207ENST00000477676 GAPVD1Q14C86 1478 aa8.45□□□□□ -1.06
CKS1B-207ENST00000477676 KCNMA1Q12791 1236 aa8.45□□□□□ -1.06
CKS1B-207ENST00000477676 ABCA10Q8WWZ4 1543 aa8.44□□□□□ -1.06
CKS1B-207ENST00000477676 SOBPA7XYQ1 873 aa8.44□□□□□ -1.06
CKS1B-207ENST00000477676 VSIG8P0DPA2 414 aa8.44□□□□□ -1.06
CKS1B-207ENST00000477676 GSK3AP49840 483 aa8.44□□□□□ -1.06
CKS1B-207ENST00000477676 MRPL14Q6P1L8 145 aaKnown RBP8.44□□□□□ -1.06
CKS1B-207ENST00000477676 SCARF1Q14162 830 aa8.43□□□□□ -1.06
CKS1B-207ENST00000477676 RETREG3Q86VR2 466 aa8.43□□□□□ -1.06
CKS1B-207ENST00000477676 GPIHBP1Q8IV16 184 aa8.43□□□□□ -1.06
CKS1B-207ENST00000477676 PURBQ96QR8 312 aaKnown RBP8.43□□□□□ -1.06
CKS1B-207ENST00000477676 CEP170Q5SW79 1584 aa8.43□□□□□ -1.06
CKS1B-207ENST00000477676 KIF13AQ9H1H9 1805 aa8.43□□□□□ -1.06
CKS1B-207ENST00000477676 HAP1P54257 671 aaPredicted RBP8.42□□□□□ -1.06
CKS1B-207ENST00000477676 MDM2Q00987 491 aaPredicted RBP8.42□□□□□ -1.06
CKS1B-207ENST00000477676 TLL2Q9Y6L7 1015 aa8.42□□□□□ -1.06
CKS1B-207ENST00000477676 ADAMTS12P58397 1594 aa8.41□□□□□ -1.06
CKS1B-207ENST00000477676 NNTQ13423 1086 aa8.41□□□□□ -1.06
CKS1B-207ENST00000477676 SHROOM2Q13796 1616 aa8.4□□□□□ -1.06
CKS1B-207ENST00000477676 GRIN2AQ12879 1464 aa8.4□□□□□ -1.06
CKS1B-207ENST00000477676 BAP1Q92560 729 aa8.4□□□□□ -1.06
CKS1B-207ENST00000477676 BIVM-ERCC5R4GMW8 1640 aa8.4□□□□□ -1.07
CKS1B-207ENST00000477676 NUP160Q12769 1436 aa8.39□□□□□ -1.07
CKS1B-207ENST00000477676 PLEKHG3A1L390 1219 aa8.39□□□□□ -1.07
CKS1B-207ENST00000477676 CCNYL3P0C7X3 344 aa8.39□□□□□ -1.07
CKS1B-207ENST00000477676 MS4A1P11836 297 aa8.39□□□□□ -1.07
CKS1B-207ENST00000477676 TIMP2P16035 220 aa8.39□□□□□ -1.07
CKS1B-207ENST00000477676 LINC01559Q495D7 138 aa8.39□□□□□ -1.07
CKS1B-207ENST00000477676 WDR4P57081 412 aaKnown RBP8.38□□□□□ -1.07
CKS1B-207ENST00000477676 MAP2K5Q13163 448 aa8.38□□□□□ -1.07
CKS1B-207ENST00000477676 MPNDQ8N594 471 aa8.38□□□□□ -1.07
CKS1B-207ENST00000477676 UNC93B1Q9H1C4 597 aa8.38□□□□□ -1.07
CKS1B-207ENST00000477676 EVA1BQ9NVM1 165 aa8.38□□□□□ -1.07
CKS1B-207ENST00000477676 TOP2BQ02880 1626 aa8.37□□□□□ -1.07
CKS1B-207ENST00000477676 IRF6O14896 467 aa8.37□□□□□ -1.07
CKS1B-207ENST00000477676 VARSP26640 1264 aaKnown RBP8.37□□□□□ -1.07
CKS1B-207ENST00000477676 TMEM151AQ8N4L1 468 aa8.37□□□□□ -1.07
CKS1B-207ENST00000477676 KLF16Q9BXK1 252 aaPredicted RBP8.37□□□□□ -1.07
CKS1B-207ENST00000477676 PCDHGC3Q9UN70 934 aa8.37□□□□□ -1.07
CKS1B-207ENST00000477676 ADH1CP00326 375 aa8.36□□□□□ -1.07
CKS1B-207ENST00000477676 NUTM1Q86Y26 1132 aa8.36□□□□□ -1.07
CKS1B-207ENST00000477676 C6orf229H3BNL8 230 aa8.35□□□□□ -1.07
CKS1B-207ENST00000477676 PPFIA3O75145 1194 aa8.35□□□□□ -1.07
CKS1B-207ENST00000477676 FDX1P10109 184 aa8.35□□□□□ -1.07
CKS1B-207ENST00000477676 RASSF7Q02833 373 aa8.35□□□□□ -1.07
CKS1B-207ENST00000477676 ZNF511Q8NB15 262 aa8.35□□□□□ -1.07
CKS1B-207ENST00000477676 MAN1A2O60476 641 aa8.34□□□□□ -1.07
CKS1B-207ENST00000477676 GDF11O95390 407 aa8.34□□□□□ -1.07
CKS1B-207ENST00000477676 KCNH2Q12809 1159 aa8.34□□□□□ -1.07
CKS1B-207ENST00000477676 PTPRNQ16849 979 aa8.34□□□□□ -1.07
CKS1B-207ENST00000477676 WRNQ14191 1432 aaPredicted RBP eCLIP8.34□□□□□ -1.07
CKS1B-207ENST00000477676 FHAD1B1AJZ9 1412 aa8.33□□□□□ -1.08
CKS1B-207ENST00000477676 FAM217BQ9NTX9 383 aaPredicted RBP8.33□□□□□ -1.08
CKS1B-207ENST00000477676 ERICH3Q5RHP9 1530 aa8.33□□□□□ -1.08
CKS1B-207ENST00000477676 C6orf118Q5T5N4 469 aa8.32□□□□□ -1.08
CKS1B-207ENST00000477676 SUPT5HO00267 1087 aaKnown RBP8.31□□□□□ -1.08
CKS1B-207ENST00000477676 GPCPD1Q9NPB8 672 aa8.31□□□□□ -1.08
CKS1B-207ENST00000477676 ADAMTS8Q9UP79 889 aa8.31□□□□□ -1.08
CKS1B-207ENST00000477676 MINK1Q8N4C8 1332 aaPredicted RBP8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms