RNA–Protein interactions for RNA: ENST00000477558.1

VPS45-207, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 1,425 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-207ENST00000477558 SALL2Q9Y467 1007 aaPredicted RBP9□□□□□ -0.97
VPS45-207ENST00000477558 GRIN2BQ13224 1484 aa8.99□□□□□ -0.97
VPS45-207ENST00000477558 GAPVD1Q14C86 1478 aa8.99□□□□□ -0.97
VPS45-207ENST00000477558 TDRD9Q8NDG6 1382 aaKnown RBP8.99□□□□□ -0.97
VPS45-207ENST00000477558 FAM160A2Q8N612 972 aaPredicted RBP8.99□□□□□ -0.97
VPS45-207ENST00000477558 SPSB2Q99619 263 aa8.99□□□□□ -0.97
VPS45-207ENST00000477558 CHD1O14646 1710 aa8.99□□□□□ -0.97
VPS45-207ENST00000477558 ERICH3Q5RHP9 1530 aa8.98□□□□□ -0.97
VPS45-207ENST00000477558 CFAP99D6REC4 459 aa8.98□□□□□ -0.97
VPS45-207ENST00000477558 USB1Q9BQ65 265 aaKnown RBP8.98□□□□□ -0.97
VPS45-207ENST00000477558 ADAMTS12P58397 1594 aa8.98□□□□□ -0.97
VPS45-207ENST00000477558 SNAPC4Q5SXM2 1469 aa8.98□□□□□ -0.97
VPS45-207ENST00000477558 GFRA3O60609 400 aa8.97□□□□□ -0.97
VPS45-207ENST00000477558 RETREG3Q86VR2 466 aa8.97□□□□□ -0.97
VPS45-207ENST00000477558 PRR7Q8TB68 274 aa8.97□□□□□ -0.97
VPS45-207ENST00000477558 SPDYE5A6NIY4 337 aa8.96□□□□□ -0.98
VPS45-207ENST00000477558 TSC1Q92574 1164 aa8.96□□□□□ -0.98
VPS45-207ENST00000477558 SYNJ2O15056 1496 aa8.95□□□□□ -0.98
VPS45-207ENST00000477558 AP1G2O75843 785 aa8.95□□□□□ -0.98
VPS45-207ENST00000477558 ADH1BP00325 375 aa8.95□□□□□ -0.98
VPS45-207ENST00000477558 CTDSPL2Q05D32 466 aa8.95□□□□□ -0.98
VPS45-207ENST00000477558 TRAF7Q6Q0C0 670 aa8.95□□□□□ -0.98
VPS45-207ENST00000477558 PRDM9Q9NQV7 894 aa8.95□□□□□ -0.98
VPS45-207ENST00000477558 LCE2BO14633 110 aa8.94□□□□□ -0.98
VPS45-207ENST00000477558 CLASP1Q7Z460 1538 aa8.92□□□□□ -0.98
VPS45-207ENST00000477558 TMEM259Q4ZIN3 620 aa8.92□□□□□ -0.98
VPS45-207ENST00000477558 PRKD2Q9BZL6 878 aa8.92□□□□□ -0.98
VPS45-207ENST00000477558 CUL7Q14999 1698 aa8.92□□□□□ -0.98
VPS45-207ENST00000477558 NRG2O14511 850 aaPredicted RBP8.91□□□□□ -0.98
VPS45-207ENST00000477558 PER1O15534 1290 aaPredicted RBP8.91□□□□□ -0.98
VPS45-207ENST00000477558 MSS51Q4VC12 460 aa8.91□□□□□ -0.98
VPS45-207ENST00000477558 SLC6A16Q9GZN6 736 aa8.91□□□□□ -0.98
VPS45-207ENST00000477558 SNRKQ9NRH2 765 aa8.91□□□□□ -0.98
VPS45-207ENST00000477558 V9GY48 417 aaPredicted RBP8.91□□□□□ -0.98
VPS45-207ENST00000477558 FHAD1B1AJZ9 1412 aa8.91□□□□□ -0.98
VPS45-207ENST00000477558 KIF27Q86VH2 1401 aa8.91□□□□□ -0.98
VPS45-207ENST00000477558 S1PR4O95977 384 aa8.9□□□□□ -0.98
VPS45-207ENST00000477558 GRIN2AQ12879 1464 aa8.9□□□□□ -0.98
VPS45-207ENST00000477558 NUP160Q12769 1436 aa8.89□□□□□ -0.99
VPS45-207ENST00000477558 JUNDP17535 347 aa8.89□□□□□ -0.99
VPS45-207ENST00000477558 DESI1Q6ICB0 168 aa8.89□□□□□ -0.99
VPS45-207ENST00000477558 PPP1R18Q6NYC8 613 aa8.89□□□□□ -0.99
VPS45-207ENST00000477558 PPEF1O14829 653 aaPredicted RBP8.88□□□□□ -0.99
VPS45-207ENST00000477558 MMP16P51512 607 aa8.88□□□□□ -0.99
VPS45-207ENST00000477558 HELBQ8NG08 1087 aaPredicted RBP8.88□□□□□ -0.99
VPS45-207ENST00000477558 LRRN4Q8WUT4 740 aa8.88□□□□□ -0.99
VPS45-207ENST00000477558 IGF1RP08069 1367 aa8.88□□□□□ -0.99
VPS45-207ENST00000477558 DXOO77932 396 aaKnown RBP8.88□□□□□ -0.99
VPS45-207ENST00000477558 USP17L8P0C7I0 530 aa8.88□□□□□ -0.99
VPS45-207ENST00000477558 LYPD8Q6UX82 237 aa8.88□□□□□ -0.99
VPS45-207ENST00000477558 BANK1Q8NDB2 785 aa8.88□□□□□ -0.99
VPS45-207ENST00000477558 CEP170Q5SW79 1584 aa8.87□□□□□ -0.99
VPS45-207ENST00000477558 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.87□□□□□ -0.99
VPS45-207ENST00000477558 SHROOM2Q13796 1616 aa8.86□□□□□ -0.99
VPS45-207ENST00000477558 HMX1Q9NP08 348 aaPredicted RBP8.86□□□□□ -0.99
VPS45-207ENST00000477558 RUSC2Q8N2Y8 1516 aa8.86□□□□□ -0.99
VPS45-207ENST00000477558 MTMR14Q8NCE2 650 aa8.85□□□□□ -0.99
VPS45-207ENST00000477558 RNF223E7ERA6 249 aa8.84□□□□□ -0.99
VPS45-207ENST00000477558 GGCXP38435 758 aa8.84□□□□□ -0.99
VPS45-207ENST00000477558 MCM6Q14566 821 aa8.84□□□□□ -0.99
VPS45-207ENST00000477558 EPS8L1Q8TE68 723 aa8.84□□□□□ -0.99
VPS45-207ENST00000477558 RIMBP3CA6NJZ7 1639 aa8.83□□□□□ -1
VPS45-207ENST00000477558 RIMBP3BA6NNM3 1639 aa8.83□□□□□ -1
VPS45-207ENST00000477558 RIMBP3Q9UFD9 1639 aa8.83□□□□□ -1
VPS45-207ENST00000477558 PTPRNQ16849 979 aa8.83□□□□□ -1
VPS45-207ENST00000477558 CCDC24Q8N4L8 307 aa8.83□□□□□ -1
VPS45-207ENST00000477558 NUDT12Q9BQG2 462 aa8.83□□□□□ -1
VPS45-207ENST00000477558 ARHGEF11O15085 1522 aa8.83□□□□□ -1
VPS45-207ENST00000477558 FLIIQ13045 1269 aa8.82□□□□□ -1
VPS45-207ENST00000477558 NR6A1Q15406 480 aa8.82□□□□□ -1
VPS45-207ENST00000477558 PTCRAQ6ISU1 281 aaPredicted RBP8.82□□□□□ -1
VPS45-207ENST00000477558 EVA1BQ9NVM1 165 aa8.82□□□□□ -1
VPS45-207ENST00000477558 MAP10Q9P2G4 905 aa8.82□□□□□ -1
VPS45-207ENST00000477558 FCF1Q9Y324 198 aaKnown RBP8.82□□□□□ -1
VPS45-207ENST00000477558 PRXQ9BXM0 1461 aa8.82□□□□□ -1
VPS45-207ENST00000477558 GJD4Q96KN9 370 aaPredicted RBP8.81□□□□□ -1
VPS45-207ENST00000477558 EEA1Q15075 1411 aa8.81□□□□□ -1
VPS45-207ENST00000477558 F12P00748 615 aaPredicted RBP8.8□□□□□ -1
VPS45-207ENST00000477558 CCNYL3P0C7X3 344 aa8.8□□□□□ -1
VPS45-207ENST00000477558 CTHP32929 405 aa8.8□□□□□ -1
VPS45-207ENST00000477558 PLA2G2CQ5R387 149 aa8.8□□□□□ -1
VPS45-207ENST00000477558 CHMP7Q8WUX9 453 aaPredicted RBP8.8□□□□□ -1
VPS45-207ENST00000477558 TRIM34Q9BYJ4 488 aa8.8□□□□□ -1
VPS45-207ENST00000477558 PDZRN3Q9UPQ7 1066 aa8.8□□□□□ -1
VPS45-207ENST00000477558 KCNH2Q12809 1159 aa8.8□□□□□ -1
VPS45-207ENST00000477558 CARMIL1Q5VZK9 1371 aa8.79□□□□□ -1
VPS45-207ENST00000477558 POM121Q96HA1 1249 aa8.79□□□□□ -1
VPS45-207ENST00000477558 RAPGEF2Q9Y4G8 1499 aa8.78□□□□□ -1
VPS45-207ENST00000477558 ZNF787Q6DD87 383 aa8.78□□□□□ -1
VPS45-207ENST00000477558 ANKLE1Q8NAG6 615 aa8.78□□□□□ -1
VPS45-207ENST00000477558 KIAA0586Q9BVV6 1533 aa8.77□□□□□ -1
VPS45-207ENST00000477558 CLUAP1Q96AJ1 413 aa8.77□□□□□ -1.01
VPS45-207ENST00000477558 ARAP1Q96P48 1450 aa8.76□□□□□ -1.01
VPS45-207ENST00000477558 UBTFP17480 764 aaKnown RBP8.76□□□□□ -1.01
VPS45-207ENST00000477558 EMID1Q96A84 441 aaPredicted RBP8.76□□□□□ -1.01
VPS45-207ENST00000477558 GDPD2Q9HCC8 539 aa8.76□□□□□ -1.01
VPS45-207ENST00000477558 TIMELESSQ9UNS1 1208 aa8.76□□□□□ -1.01
VPS45-207ENST00000477558 TBC1D2BQ9UPU7 963 aa8.76□□□□□ -1.01
VPS45-207ENST00000477558 CTTNBP2Q8WZ74 1663 aa8.76□□□□□ -1.01
VPS45-207ENST00000477558 ERCC6L2Q5T890 1561 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms