RNA–Protein interactions for RNA: ENST00000477288.5

VARS2-209, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 6,054 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-209ENST00000477288 SURF6O75683 361 aaKnown RBP22.26■■□□□ 1.15
VARS2-209ENST00000477288 CNNM1Q9NRU3 951 aa22.26■■□□□ 1.15
VARS2-209ENST00000477288 CDC45O75419 566 aa22.26■■□□□ 1.15
VARS2-209ENST00000477288 CLASRPQ8N2M8 674 aaKnown RBP22.26■■□□□ 1.15
VARS2-209ENST00000477288 CDK5RAP3Q96JB5 506 aa22.26■■□□□ 1.15
VARS2-209ENST00000477288 MAP7D2Q96T17 732 aa22.26■■□□□ 1.15
VARS2-209ENST00000477288 C22orf23Q9BZE7 217 aa22.26■■□□□ 1.15
VARS2-209ENST00000477288 ATP2B2Q01814 1243 aa22.26■■□□□ 1.15
VARS2-209ENST00000477288 NCOA2Q15596 1464 aa22.26■■□□□ 1.15
VARS2-209ENST00000477288 FYCO1Q9BQS8 1478 aa22.26■■□□□ 1.15
VARS2-209ENST00000477288 ANKRD50Q9ULJ7 1429 aa22.26■■□□□ 1.15
VARS2-209ENST00000477288 TTC39AQ5SRH9 613 aa22.25■■□□□ 1.15
VARS2-209ENST00000477288 GAS2L2Q8NHY3 880 aa22.25■■□□□ 1.15
VARS2-209ENST00000477288 FAM43AQ8N2R8 423 aa22.24■■□□□ 1.15
VARS2-209ENST00000477288 TXNDC2Q86VQ3 553 aa22.24■■□□□ 1.15
VARS2-209ENST00000477288 RDXP35241 583 aaKnown RBP22.24■■□□□ 1.15
VARS2-209ENST00000477288 RNF214Q8ND24 703 aa22.24■■□□□ 1.15
VARS2-209ENST00000477288 BRPF1P55201 1214 aaPredicted RBP22.23■■□□□ 1.15
VARS2-209ENST00000477288 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.23■■□□□ 1.15
VARS2-209ENST00000477288 NOM1Q5C9Z4 860 aaKnown RBP22.23■■□□□ 1.15
VARS2-209ENST00000477288 SMC2O95347 1197 aa22.23■■□□□ 1.15
VARS2-209ENST00000477288 SYNJ1O43426 1573 aa22.22■■□□□ 1.15
VARS2-209ENST00000477288 SMG6Q86US8 1419 aaKnown RBP22.22■■□□□ 1.15
VARS2-209ENST00000477288 ARAP1Q96P48 1450 aa22.22■■□□□ 1.15
VARS2-209ENST00000477288 STK11IPQ8N1F8 1099 aa22.22■■□□□ 1.15
VARS2-209ENST00000477288 ZNF428Q96B54 188 aa22.22■■□□□ 1.15
VARS2-209ENST00000477288 KRT18P05783 430 aaKnown RBP22.22■■□□□ 1.15
VARS2-209ENST00000477288 GNAI3P08754 354 aa22.21■■□□□ 1.15
VARS2-209ENST00000477288 TATP17735 454 aaPredicted RBP22.21■■□□□ 1.15
VARS2-209ENST00000477288 MTHFSP49914 203 aa22.21■■□□□ 1.15
VARS2-209ENST00000477288 FMNL2Q96PY5 1086 aa22.2■■□□□ 1.15
VARS2-209ENST00000477288 DCTN1Q14203 1278 aa22.2■■□□□ 1.14
VARS2-209ENST00000477288 GNL3LQ9NVN8 582 aaKnown RBP22.2■■□□□ 1.14
VARS2-209ENST00000477288 MAGEC2Q9UBF1 373 aaPredicted RBP22.2■■□□□ 1.14
VARS2-209ENST00000477288 DDX54Q8TDD1 881 aaKnown RBP22.2■■□□□ 1.14
VARS2-209ENST00000477288 PRDM2Q13029 1718 aa22.2■■□□□ 1.14
VARS2-209ENST00000477288 SYCP1Q15431 976 aa22.19■■□□□ 1.14
VARS2-209ENST00000477288 MYO6Q9UM54 1294 aa22.19■■□□□ 1.14
VARS2-209ENST00000477288 NESP48681 1621 aa22.19■■□□□ 1.14
VARS2-209ENST00000477288 CCDC158Q5M9N0 1113 aa22.19■■□□□ 1.14
VARS2-209ENST00000477288 H0YHG0 523 aa22.19■■□□□ 1.14
VARS2-209ENST00000477288 CABP4P57796 275 aa22.18■■□□□ 1.14
VARS2-209ENST00000477288 CCDC191Q8NCU4 936 aa22.18■■□□□ 1.14
VARS2-209ENST00000477288 TRIM5Q9C035 493 aa22.18■■□□□ 1.14
VARS2-209ENST00000477288 TOM1L2Q6ZVM7 507 aa22.18■■□□□ 1.14
VARS2-209ENST00000477288 CEBPZQ03701 1054 aaKnown RBP22.17■■□□□ 1.14
VARS2-209ENST00000477288 CCDC39Q9UFE4 941 aa22.17■■□□□ 1.14
VARS2-209ENST00000477288 PRKAR2BP31323 418 aa22.17■■□□□ 1.14
VARS2-209ENST00000477288 RBM5P52756 815 aaKnown RBP eCLIP22.17■■□□□ 1.144e-6■■□□□ 12.4
VARS2-209ENST00000477288 TXLNAP40222 546 aa22.17■■□□□ 1.14
VARS2-209ENST00000477288 FILIP1LQ4L180 1135 aa22.15■■□□□ 1.14
VARS2-209ENST00000477288 ERCC4Q92889 916 aaPredicted RBP22.15■■□□□ 1.14
VARS2-209ENST00000477288 SMARCE1Q969G3 411 aa22.15■■□□□ 1.14
VARS2-209ENST00000477288 NEFHP12036 1026 aa22.15■■□□□ 1.14
VARS2-209ENST00000477288 NASPP49321 788 aaPredicted RBP22.15■■□□□ 1.14
VARS2-209ENST00000477288 AFAP1Q8N556 730 aa22.15■■□□□ 1.14
VARS2-209ENST00000477288 PRXQ9BXM0 1461 aa22.15■■□□□ 1.14
VARS2-209ENST00000477288 C1orf115Q9H7X2 142 aa22.14■■□□□ 1.14
VARS2-209ENST00000477288 KINO60870 393 aaKnown RBP22.14■■□□□ 1.14
VARS2-209ENST00000477288 HIP1O00291 1037 aa22.14■■□□□ 1.13
VARS2-209ENST00000477288 KIF7Q2M1P5 1343 aa22.14■■□□□ 1.13
VARS2-209ENST00000477288 ERC1Q8IUD2 1116 aa22.14■■□□□ 1.13
VARS2-209ENST00000477288 HMGXB3Q12766 1538 aa22.14■■□□□ 1.13
VARS2-209ENST00000477288 PRAM1Q96QH2 718 aa22.13■■□□□ 1.13
VARS2-209ENST00000477288 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.13■■□□□ 1.138e-8■■■■■ 43.3
VARS2-209ENST00000477288 SYNJ2O15056 1496 aa22.13■■□□□ 1.13
VARS2-209ENST00000477288 MRC2Q9UBG0 1479 aa22.13■■□□□ 1.13
VARS2-209ENST00000477288 SIL1Q9H173 461 aa22.13■■□□□ 1.13
VARS2-209ENST00000477288 PRG4Q92954 1404 aaPredicted RBP22.13■■□□□ 1.13
VARS2-209ENST00000477288 CCDC7Q96M83 1385 aa22.13■■□□□ 1.13
VARS2-209ENST00000477288 TCP11L2Q8N4U5 519 aa22.13■■□□□ 1.13
VARS2-209ENST00000477288 TWISTNBQ3B726 338 aaPredicted RBP22.12■■□□□ 1.13
VARS2-209ENST00000477288 CFAP70Q5T0N1 1121 aa22.12■■□□□ 1.13
VARS2-209ENST00000477288 ZHX3Q9H4I2 956 aa22.12■■□□□ 1.13
VARS2-209ENST00000477288 ADAMTS8Q9UP79 889 aa22.12■■□□□ 1.13
VARS2-209ENST00000477288 PDCL3Q9H2J4 239 aa22.12■■□□□ 1.13
VARS2-209ENST00000477288 CAVIN1Q6NZI2 390 aaKnown RBP22.11■■□□□ 1.13
VARS2-209ENST00000477288 TOPBP1Q92547 1522 aa22.11■■□□□ 1.13
VARS2-209ENST00000477288 ANKRD62A6NC57 917 aa22.11■■□□□ 1.13
VARS2-209ENST00000477288 PLCD4Q9BRC7 762 aa22.11■■□□□ 1.13
VARS2-209ENST00000477288 ARHGAP5Q13017 1502 aa22.11■■□□□ 1.13
VARS2-209ENST00000477288 CNTLNQ9NXG0 1405 aa22.11■■□□□ 1.13
VARS2-209ENST00000477288 IFT140Q96RY7 1462 aa22.11■■□□□ 1.13
VARS2-209ENST00000477288 PIP4K2BP78356 416 aa22.11■■□□□ 1.13
VARS2-209ENST00000477288 GNAI2P04899 355 aa22.1■■□□□ 1.13
VARS2-209ENST00000477288 MYL6BP14649 208 aa22.1■■□□□ 1.13
VARS2-209ENST00000477288 EXOSC9Q06265 439 aaKnown RBP22.1■■□□□ 1.13
VARS2-209ENST00000477288 HDGFL1Q5TGJ6 251 aa22.1■■□□□ 1.13
VARS2-209ENST00000477288 RRBP1Q9P2E9 1410 aaKnown RBP22.1■■□□□ 1.13
VARS2-209ENST00000477288 NEK4P51957 841 aa22.1■■□□□ 1.13
VARS2-209ENST00000477288 AXDND1Q5T1B0 1012 aaPredicted RBP22.1■■□□□ 1.13
VARS2-209ENST00000477288 STK38Q15208 465 aa22.09■■□□□ 1.13
VARS2-209ENST00000477288 POLA1P09884 1462 aaPredicted RBP22.09■■□□□ 1.13
VARS2-209ENST00000477288 AAMPQ13685 434 aa22.09■■□□□ 1.13
VARS2-209ENST00000477288 TSPYL1Q9H0U9 437 aa22.09■■□□□ 1.13
VARS2-209ENST00000477288 SLC4A2P04920 1241 aa22.08■■□□□ 1.13
VARS2-209ENST00000477288 TOP2BQ02880 1626 aa22.08■■□□□ 1.13
VARS2-209ENST00000477288 ZNF396Q96N95 335 aaPredicted RBP22.08■■□□□ 1.13
VARS2-209ENST00000477288 MPHOSPH8Q99549 860 aa22.08■■□□□ 1.13
VARS2-209ENST00000477288 NACAP1Q9BZK3 213 aa22.08■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms