RNA–Protein interactions for RNA: ENST00000476613.1

IRF1-209, Transcript of interferon regulatory factor 1, humanhuman

TSL 2

Gene IRF1, Length 523 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-209ENST00000476613 GPRASP1Q5JY77 1395 aa12.08□□□□□ -0.48
IRF1-209ENST00000476613 TRIM37O94972 964 aa12.08□□□□□ -0.48
IRF1-209ENST00000476613 C14orf93Q9H972 538 aaKnown RBP12.08□□□□□ -0.48
IRF1-209ENST00000476613 SPON1Q9HCB6 807 aa12.08□□□□□ -0.48
IRF1-209ENST00000476613 TRPM3Q9HCF6 1732 aaPredicted RBP12.08□□□□□ -0.48
IRF1-209ENST00000476613 SPATA31A1Q5TZJ5 1347 aa12.08□□□□□ -0.48
IRF1-209ENST00000476613 RREB1Q92766 1687 aa12.07□□□□□ -0.48
IRF1-209ENST00000476613 ALS2Q96Q42 1657 aa12.07□□□□□ -0.48
IRF1-209ENST00000476613 C11orf95C9JLR9 678 aaPredicted RBP12.07□□□□□ -0.48
IRF1-209ENST00000476613 PLEKHG5O94827 1062 aa12.07□□□□□ -0.48
IRF1-209ENST00000476613 RGL3Q3MIN7 710 aa12.07□□□□□ -0.48
IRF1-209ENST00000476613 EIF3AQ14152 1382 aaKnown RBP12.06□□□□□ -0.48
IRF1-209ENST00000476613 KCNQ2O43526 872 aa12.06□□□□□ -0.48
IRF1-209ENST00000476613 PMFBP1Q8TBY8 1022 aa12.06□□□□□ -0.48
IRF1-209ENST00000476613 PPP1R1BQ9UD71 204 aaPredicted RBP12.06□□□□□ -0.48
IRF1-209ENST00000476613 DLC1Q96QB1 1528 aa12.06□□□□□ -0.48
IRF1-209ENST00000476613 BARGINQ6ZT62 677 aa12.05□□□□□ -0.48
IRF1-209ENST00000476613 PRAM1Q96QH2 718 aa12.05□□□□□ -0.48
IRF1-209ENST00000476613 PRDM11Q9NQV5 511 aa12.05□□□□□ -0.48
IRF1-209ENST00000476613 ACIN1Q9UKV3 1341 aaKnown RBP12.05□□□□□ -0.48
IRF1-209ENST00000476613 NUP188Q5SRE5 1749 aa12.04□□□□□ -0.48
IRF1-209ENST00000476613 CRYBG1Q9Y4K1 1723 aa12.03□□□□□ -0.48
IRF1-209ENST00000476613 PDE3BQ13370 1112 aa12.03□□□□□ -0.48
IRF1-209ENST00000476613 POGKQ9P215 609 aa12.02□□□□□ -0.49
IRF1-209ENST00000476613 CFAP70Q5T0N1 1121 aa12.01□□□□□ -0.49
IRF1-209ENST00000476613 THRAP3Q9Y2W1 955 aaKnown RBP12.01□□□□□ -0.49
IRF1-209ENST00000476613 TULP4Q9NRJ4 1543 aa12.01□□□□□ -0.49
IRF1-209ENST00000476613 KIAA0232Q92628 1395 aa12□□□□□ -0.49
IRF1-209ENST00000476613 PLSCR1O15162 318 aa11.99□□□□□ -0.49
IRF1-209ENST00000476613 SAFB2Q14151 953 aaKnown RBP eCLIP11.99□□□□□ -0.49
IRF1-209ENST00000476613 NGDNQ8NEJ9 315 aaKnown RBP11.99□□□□□ -0.49
IRF1-209ENST00000476613 STRN4Q9NRL3 753 aa11.99□□□□□ -0.49
IRF1-209ENST00000476613 RGPD3A6NKT7 1758 aaPredicted RBP11.98□□□□□ -0.49
IRF1-209ENST00000476613 RGPD4Q7Z3J3 1758 aa11.98□□□□□ -0.49
IRF1-209ENST00000476613 ATP7BP35670 1465 aa11.98□□□□□ -0.49
IRF1-209ENST00000476613 SSH2Q76I76 1423 aa11.98□□□□□ -0.49
IRF1-209ENST00000476613 PRR36Q9H6K5 1346 aa11.98□□□□□ -0.49
IRF1-209ENST00000476613 WASLO00401 505 aaPredicted RBP11.98□□□□□ -0.49
IRF1-209ENST00000476613 PAK3O75914 559 aaPredicted RBP11.98□□□□□ -0.49
IRF1-209ENST00000476613 EVA1CP58658 441 aa11.98□□□□□ -0.49
IRF1-209ENST00000476613 TCP11L2Q8N4U5 519 aa11.98□□□□□ -0.49
IRF1-209ENST00000476613 ZNF784Q8NCA9 323 aaPredicted RBP11.98□□□□□ -0.49
IRF1-209ENST00000476613 MPHOSPH9Q99550 1183 aa11.98□□□□□ -0.49
IRF1-209ENST00000476613 CHRNA2Q15822 529 aa11.96□□□□□ -0.49
IRF1-209ENST00000476613 PHRF1Q9P1Y6 1649 aaKnown RBP11.96□□□□□ -0.5
IRF1-209ENST00000476613 CPDO75976 1380 aa11.95□□□□□ -0.5
IRF1-209ENST00000476613 IFFO2Q5TF58 517 aa11.95□□□□□ -0.5
IRF1-209ENST00000476613 USP35Q9P2H5 1018 aa11.95□□□□□ -0.5
IRF1-209ENST00000476613 ADGRB1O14514 1584 aa11.95□□□□□ -0.5
IRF1-209ENST00000476613 C1QTNF8P60827 252 aa11.94□□□□□ -0.5
IRF1-209ENST00000476613 ZC3H6P61129 1189 aaKnown RBP11.94□□□□□ -0.5
IRF1-209ENST00000476613 HIRIP3Q9BW71 556 aaPredicted RBP11.94□□□□□ -0.5
IRF1-209ENST00000476613 PARP4Q9UKK3 1724 aaKnown RBP11.94□□□□□ -0.5
IRF1-209ENST00000476613 OVOS2A0A0G2JMS6 1433 aa11.94□□□□□ -0.5
IRF1-209ENST00000476613 OVOS2A0A0J9YW53 1432 aa11.94□□□□□ -0.5
IRF1-209ENST00000476613 OVOS2Q6IE36 1432 aa11.94□□□□□ -0.5
IRF1-209ENST00000476613 MINK1Q8N4C8 1332 aaPredicted RBP11.93□□□□□ -0.5
IRF1-209ENST00000476613 CASZ1Q86V15 1759 aa11.93□□□□□ -0.5
IRF1-209ENST00000476613 SENP3-EIF4A1A0A087X0R7 540 aa11.93□□□□□ -0.5
IRF1-209ENST00000476613 LARP1Q6PKG0 1096 aaKnown RBP11.93□□□□□ -0.5
IRF1-209ENST00000476613 STAC3Q96MF2 364 aa11.93□□□□□ -0.5
IRF1-209ENST00000476613 TRAK1Q9UPV9 953 aa11.93□□□□□ -0.5
IRF1-209ENST00000476613 ITSN1Q15811 1721 aa11.93□□□□□ -0.5
IRF1-209ENST00000476613 CAMTA1Q9Y6Y1 1673 aa11.93□□□□□ -0.5
IRF1-209ENST00000476613 LMO7Q8WWI1 1683 aa11.92□□□□□ -0.5
IRF1-209ENST00000476613 NRKQ7Z2Y5 1582 aa11.92□□□□□ -0.5
IRF1-209ENST00000476613 POLR3AO14802 1390 aaPredicted RBP11.92□□□□□ -0.5
IRF1-209ENST00000476613 PTGER2P43116 358 aa11.91□□□□□ -0.5
IRF1-209ENST00000476613 NUDT16Q96DE0 195 aaKnown RBP11.91□□□□□ -0.5
IRF1-209ENST00000476613 BCL11BQ9C0K0 894 aaPredicted RBP11.91□□□□□ -0.5
IRF1-209ENST00000476613 BCL9O00512 1426 aa11.91□□□□□ -0.5
IRF1-209ENST00000476613 PEAK1Q9H792 1746 aa11.91□□□□□ -0.5
IRF1-209ENST00000476613 USP19O94966 1318 aa11.9□□□□□ -0.5
IRF1-209ENST00000476613 ANO8Q9HCE9 1232 aaPredicted RBP11.9□□□□□ -0.5
IRF1-209ENST00000476613 CRB1P82279 1406 aa11.89□□□□□ -0.51
IRF1-209ENST00000476613 SYT17Q9BSW7 474 aa11.89□□□□□ -0.51
IRF1-209ENST00000476613 COL5A2P05997 1499 aaPredicted RBP11.89□□□□□ -0.51
IRF1-209ENST00000476613 PLEKHG3A1L390 1219 aa11.88□□□□□ -0.51
IRF1-209ENST00000476613 NLRP13Q86W25 1043 aa11.88□□□□□ -0.51
IRF1-209ENST00000476613 ABTB2Q8N961 1025 aa11.88□□□□□ -0.51
IRF1-209ENST00000476613 MTFR1LQ9H019 292 aa11.88□□□□□ -0.51
IRF1-209ENST00000476613 CCDC61Q9Y6R9 512 aa11.88□□□□□ -0.51
IRF1-209ENST00000476613 BRD4O60885 1362 aaPredicted RBP11.88□□□□□ -0.51
IRF1-209ENST00000476613 CHD4Q14839 1912 aa11.88□□□□□ -0.51
IRF1-209ENST00000476613 MYOM1P52179 1685 aa11.87□□□□□ -0.51
IRF1-209ENST00000476613 ZBTB7AO95365 584 aa11.87□□□□□ -0.51
IRF1-209ENST00000476613 GCP02774 474 aa11.87□□□□□ -0.51
IRF1-209ENST00000476613 DDB1Q16531 1140 aa11.87□□□□□ -0.51
IRF1-209ENST00000476613 PROM2Q8N271 834 aa11.87□□□□□ -0.51
IRF1-209ENST00000476613 CDCA7Q9BWT1 371 aaPredicted RBP11.87□□□□□ -0.51
IRF1-209ENST00000476613 FHDC1Q9C0D6 1143 aaPredicted RBP11.87□□□□□ -0.51
IRF1-209ENST00000476613 STK32BQ9NY57 414 aa11.87□□□□□ -0.51
IRF1-209ENST00000476613 SBF2Q86WG5 1849 aa11.87□□□□□ -0.51
IRF1-209ENST00000476613 AATKQ6ZMQ8 1374 aa11.87□□□□□ -0.51
IRF1-209ENST00000476613 MAP3K5Q99683 1374 aa11.87□□□□□ -0.51
IRF1-209ENST00000476613 ACEP12821 1306 aa11.86□□□□□ -0.51
IRF1-209ENST00000476613 SLC15A2Q16348 729 aa11.86□□□□□ -0.51
IRF1-209ENST00000476613 NUTM2GQ5VZR2 741 aa11.86□□□□□ -0.51
IRF1-209ENST00000476613 SGIP1Q9BQI5 828 aa11.86□□□□□ -0.51
IRF1-209ENST00000476613 CDK19Q9BWU1 502 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms