RNA–Protein interactions for RNA: ENST00000467141.1

MSL3-209, Transcript of MSL complex subunit 3, humanhuman

TSL 3

Gene MSL3, Length 599 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-209ENST00000467141 CEP164Q9UPV0 1460 aa7.12□□□□□ -1.27
MSL3-209ENST00000467141 RCCD1A6NED2 376 aa7.12□□□□□ -1.27
MSL3-209ENST00000467141 GOLGA2P5Q9HBQ8 144 aa7.12□□□□□ -1.27
MSL3-209ENST00000467141 WDR70Q9NW82 654 aa7.12□□□□□ -1.27
MSL3-209ENST00000467141 FANCD2Q9BXW9 1451 aa7.11□□□□□ -1.27
MSL3-209ENST00000467141 MORN1Q5T089 497 aa7.11□□□□□ -1.27
MSL3-209ENST00000467141 LCE1DQ5T752 114 aa7.11□□□□□ -1.27
MSL3-209ENST00000467141 WNT7BP56706 349 aa7.1□□□□□ -1.27
MSL3-209ENST00000467141 RNFT1Q5M7Z0 435 aa7.09□□□□□ -1.27
MSL3-209ENST00000467141 SLC27A5Q9Y2P5 690 aa7.09□□□□□ -1.27
MSL3-209ENST00000467141 URB2Q14146 1524 aaKnown RBP7.08□□□□□ -1.28
MSL3-209ENST00000467141 SIAH2O43255 324 aa7.08□□□□□ -1.28
MSL3-209ENST00000467141 SLURP2P0DP57 97 aa7.08□□□□□ -1.28
MSL3-209ENST00000467141 RSPH4AQ5TD94 716 aa7.08□□□□□ -1.28
MSL3-209ENST00000467141 CCDC88BA6NC98 1476 aa7.08□□□□□ -1.28
MSL3-209ENST00000467141 CNTNAP5Q8WYK1 1306 aa7.07□□□□□ -1.28
MSL3-209ENST00000467141 PHF20L1A8MW92 1017 aa7.07□□□□□ -1.28
MSL3-209ENST00000467141 MSS51Q4VC12 460 aa7.07□□□□□ -1.28
MSL3-209ENST00000467141 CCDC24Q8N4L8 307 aa7.07□□□□□ -1.28
MSL3-209ENST00000467141 E2F4Q16254 413 aa7.06□□□□□ -1.28
MSL3-209ENST00000467141 BRICD5Q6PL45 260 aa7.06□□□□□ -1.28
MSL3-209ENST00000467141 EHBP1Q8NDI1 1231 aa7.06□□□□□ -1.28
MSL3-209ENST00000467141 MAP3K10Q02779 954 aa7.05□□□□□ -1.28
MSL3-209ENST00000467141 FUT2Q10981 343 aa7.04□□□□□ -1.28
MSL3-209ENST00000467141 TSHZ2Q9NRE2 1034 aa7.04□□□□□ -1.28
MSL3-209ENST00000467141 SALL2Q9Y467 1007 aaPredicted RBP7.04□□□□□ -1.28
MSL3-209ENST00000467141 ATP6V1AP38606 617 aa7.03□□□□□ -1.28
MSL3-209ENST00000467141 FAM161AQ3B820 660 aa7.03□□□□□ -1.28
MSL3-209ENST00000467141 C6orf118Q5T5N4 469 aa7.03□□□□□ -1.28
MSL3-209ENST00000467141 LYPD4Q6UWN0 246 aa7.03□□□□□ -1.28
MSL3-209ENST00000467141 ADGRG1Q9Y653 693 aa7.03□□□□□ -1.28
MSL3-209ENST00000467141 RNF19BQ6ZMZ0 732 aa7.02□□□□□ -1.29
MSL3-209ENST00000467141 EIF4G3O43432 1585 aaKnown RBP7.01□□□□□ -1.29
MSL3-209ENST00000467141 DNMBPQ6XZF7 1577 aa7.01□□□□□ -1.29
MSL3-209ENST00000467141 COBLO75128 1261 aa7.01□□□□□ -1.29
MSL3-209ENST00000467141 BEND7Q8N7W2 519 aaPredicted RBP7.01□□□□□ -1.29
MSL3-209ENST00000467141 TOPBP1Q92547 1522 aa7.01□□□□□ -1.29
MSL3-209ENST00000467141 MMP16P51512 607 aa7□□□□□ -1.29
MSL3-209ENST00000467141 ZMYM1Q5SVZ6 1142 aa7□□□□□ -1.29
MSL3-209ENST00000467141 ENAMQ9NRM1 1142 aa7□□□□□ -1.29
MSL3-209ENST00000467141 CHD1O14646 1710 aa7□□□□□ -1.29
MSL3-209ENST00000467141 TARBP1Q13395 1621 aaKnown RBP7□□□□□ -1.29
MSL3-209ENST00000467141 WDR4P57081 412 aaKnown RBP6.99□□□□□ -1.29
MSL3-209ENST00000467141 WDR97A6NE52 1622 aa6.98□□□□□ -1.29
MSL3-209ENST00000467141 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.97□□□□□ -1.29
MSL3-209ENST00000467141 ADAMTS2O95450 1211 aa6.97□□□□□ -1.29
MSL3-209ENST00000467141 TIMP2P16035 220 aa6.97□□□□□ -1.29
MSL3-209ENST00000467141 NNTQ13423 1086 aa6.97□□□□□ -1.29
MSL3-209ENST00000467141 PODNQ7Z5L7 613 aa6.97□□□□□ -1.29
MSL3-209ENST00000467141 NANOS1Q8WY41 292 aaKnown RBP6.97□□□□□ -1.29
MSL3-209ENST00000467141 ZNF608Q9ULD9 1512 aaPredicted RBP6.96□□□□□ -1.29
MSL3-209ENST00000467141 ABCC8Q09428 1581 aa6.96□□□□□ -1.29
MSL3-209ENST00000467141 CELA2BP08218 269 aaPredicted RBP6.96□□□□□ -1.3
MSL3-209ENST00000467141 PLCB2Q00722 1185 aa6.96□□□□□ -1.3
MSL3-209ENST00000467141 RDH13Q8NBN7 331 aa6.96□□□□□ -1.3
MSL3-209ENST00000467141 KRTAP4-9Q9BYQ8 210 aa6.96□□□□□ -1.3
MSL3-209ENST00000467141 KRTAP4-2Q9BYR5 136 aa6.96□□□□□ -1.3
MSL3-209ENST00000467141 ARIH1Q9Y4X5 557 aaPredicted RBP6.96□□□□□ -1.3
MSL3-209ENST00000467141 IFT140Q96RY7 1462 aa6.96□□□□□ -1.3
MSL3-209ENST00000467141 SCO2A0A1W2PP80 73 aa6.95□□□□□ -1.3
MSL3-209ENST00000467141 DNMT3LQ9UJW3 386 aa6.95□□□□□ -1.3
MSL3-209ENST00000467141 PBRM1Q86U86 1689 aa6.95□□□□□ -1.3
MSL3-209ENST00000467141 ADH1CP00326 375 aa6.94□□□□□ -1.3
MSL3-209ENST00000467141 BMP2P12643 396 aa6.94□□□□□ -1.3
MSL3-209ENST00000467141 POLA1P09884 1462 aaPredicted RBP6.93□□□□□ -1.3
MSL3-209ENST00000467141 VWA5B2Q8N398 1253 aa6.93□□□□□ -1.3
MSL3-209ENST00000467141 TLL2Q9Y6L7 1015 aa6.93□□□□□ -1.3
MSL3-209ENST00000467141 CUX1P39880 1505 aa6.92□□□□□ -1.3
MSL3-209ENST00000467141 RIMBP3CA6NJZ7 1639 aa6.92□□□□□ -1.3
MSL3-209ENST00000467141 RIMBP3BA6NNM3 1639 aa6.92□□□□□ -1.3
MSL3-209ENST00000467141 RIMBP3Q9UFD9 1639 aa6.92□□□□□ -1.3
MSL3-209ENST00000467141 CDC14CA4D256 554 aa6.92□□□□□ -1.3
MSL3-209ENST00000467141 DXOO77932 396 aaKnown RBP6.92□□□□□ -1.3
MSL3-209ENST00000467141 ITGB7P26010 798 aa6.92□□□□□ -1.3
MSL3-209ENST00000467141 PTSQ03393 145 aa6.92□□□□□ -1.3
MSL3-209ENST00000467141 ARHGEF1Q92888 912 aaKnown RBP6.92□□□□□ -1.3
MSL3-209ENST00000467141 KRBA1A5PL33 1030 aa6.91□□□□□ -1.3
MSL3-209ENST00000467141 HAP1P54257 671 aaPredicted RBP6.91□□□□□ -1.3
MSL3-209ENST00000467141 FGD5Q6ZNL6 1462 aa6.91□□□□□ -1.3
MSL3-209ENST00000467141 BIVM-ERCC5R4GMW8 1640 aa6.9□□□□□ -1.3
MSL3-209ENST00000467141 PLEKHG3A1L390 1219 aa6.9□□□□□ -1.3
MSL3-209ENST00000467141 NEDD1Q8NHV4 660 aa6.9□□□□□ -1.3
MSL3-209ENST00000467141 KCNV2Q8TDN2 545 aa6.9□□□□□ -1.3
MSL3-209ENST00000467141 SEMA6BQ9H3T3 888 aa6.9□□□□□ -1.3
MSL3-209ENST00000467141 UPP2O95045 317 aa6.89□□□□□ -1.31
MSL3-209ENST00000467141 SV2AQ7L0J3 742 aa6.89□□□□□ -1.31
MSL3-209ENST00000467141 P3H3Q8IVL6 736 aa6.89□□□□□ -1.31
MSL3-209ENST00000467141 SOS2Q07890 1332 aaPredicted RBP6.89□□□□□ -1.31
MSL3-209ENST00000467141 RAD54L2Q9Y4B4 1467 aa6.89□□□□□ -1.31
MSL3-209ENST00000467141 ABCA5Q8WWZ7 1642 aa6.88□□□□□ -1.31
MSL3-209ENST00000467141 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.88□□□□□ -1.31
MSL3-209ENST00000467141 NBPF11Q86T75 865 aa6.88□□□□□ -1.31
MSL3-209ENST00000467141 CCDC155Q8N6L0 562 aa6.88□□□□□ -1.31
MSL3-209ENST00000467141 AQRO60306 1485 aaKnown RBP eCLIP6.87□□□□□ -1.311e-7■■■■□ 19.5
MSL3-209ENST00000467141 SRSF11Q05519 484 aaKnown RBP6.87□□□□□ -1.31
MSL3-209ENST00000467141 Q3C1V9 767 aa6.87□□□□□ -1.31
MSL3-209ENST00000467141 SH3RF1Q7Z6J0 888 aa6.87□□□□□ -1.31
MSL3-209ENST00000467141 USB1Q9BQ65 265 aaKnown RBP6.87□□□□□ -1.31
MSL3-209ENST00000467141 KLF16Q9BXK1 252 aaPredicted RBP6.87□□□□□ -1.31
MSL3-209ENST00000467141 ZFAND3Q9H8U3 227 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms