RNA–Protein interactions for RNA: ENST00000464518.1

SLC13A3-208, Transcript of solute carrier family 13 member 3, humanhuman

TSL 5

Gene SLC13A3, Length 792 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC13A3-208ENST00000464518 THSD7AQ9UPZ6 1657 aa18.88■□□□□ 0.61
SLC13A3-208ENST00000464518 PPARGC1BQ86YN6 1023 aaKnown RBP18.87■□□□□ 0.61
SLC13A3-208ENST00000464518 A0A0G2JS52 829 aa18.86■□□□□ 0.61
SLC13A3-208ENST00000464518 MYT1Q01538 1121 aa18.86■□□□□ 0.61
SLC13A3-208ENST00000464518 TNS1Q9HBL0 1735 aaKnown RBP18.86■□□□□ 0.61
SLC13A3-208ENST00000464518 FAM98CQ17RN3 349 aaKnown RBP18.85■□□□□ 0.61
SLC13A3-208ENST00000464518 LMOD2Q6P5Q4 547 aa18.85■□□□□ 0.61
SLC13A3-208ENST00000464518 BTG4Q9NY30 223 aa18.85■□□□□ 0.61
SLC13A3-208ENST00000464518 GPRASP1Q5JY77 1395 aa18.84■□□□□ 0.61
SLC13A3-208ENST00000464518 PARD3Q8TEW0 1356 aa18.84■□□□□ 0.61
SLC13A3-208ENST00000464518 PSDA5PKW4 1024 aaPredicted RBP18.84■□□□□ 0.61
SLC13A3-208ENST00000464518 CRYBG1Q9Y4K1 1723 aa18.83■□□□□ 0.61
SLC13A3-208ENST00000464518 SPATA31A5Q5VU36 1347 aa18.83■□□□□ 0.61
SLC13A3-208ENST00000464518 SPATA31A7Q8IWB4 1347 aa18.83■□□□□ 0.61
SLC13A3-208ENST00000464518 PRAM1Q96QH2 718 aa18.83■□□□□ 0.6
SLC13A3-208ENST00000464518 MPHOSPH9Q99550 1183 aa18.83■□□□□ 0.6
SLC13A3-208ENST00000464518 TULP4Q9NRJ4 1543 aa18.81■□□□□ 0.6
SLC13A3-208ENST00000464518 EN1Q05925 392 aaPredicted RBP18.81■□□□□ 0.6
SLC13A3-208ENST00000464518 CFAP70Q5T0N1 1121 aa18.8■□□□□ 0.6
SLC13A3-208ENST00000464518 PMFBP1Q8TBY8 1022 aa18.79■□□□□ 0.6
SLC13A3-208ENST00000464518 ADGRB1O14514 1584 aa18.78■□□□□ 0.6
SLC13A3-208ENST00000464518 POGKQ9P215 609 aa18.78■□□□□ 0.6
SLC13A3-208ENST00000464518 R3HDM1Q15032 1099 aaKnown RBP18.77■□□□□ 0.6
SLC13A3-208ENST00000464518 FAM196AQ6ZSG2 479 aa18.77■□□□□ 0.6
SLC13A3-208ENST00000464518 CAPN15O75808 1086 aa18.75■□□□□ 0.59
SLC13A3-208ENST00000464518 SLC4A2P04920 1241 aa18.75■□□□□ 0.59
SLC13A3-208ENST00000464518 SAFB2Q14151 953 aaKnown RBP eCLIP18.75■□□□□ 0.59
SLC13A3-208ENST00000464518 CAMKK2Q96RR4 588 aa18.75■□□□□ 0.59
SLC13A3-208ENST00000464518 PRDM11Q9NQV5 511 aa18.75■□□□□ 0.59
SLC13A3-208ENST00000464518 ATP7BP35670 1465 aa18.75■□□□□ 0.59
SLC13A3-208ENST00000464518 RREB1Q92766 1687 aa18.75■□□□□ 0.59
SLC13A3-208ENST00000464518 SPATA31A1Q5TZJ5 1347 aa18.74■□□□□ 0.59
SLC13A3-208ENST00000464518 ITSN1Q15811 1721 aa18.74■□□□□ 0.59
SLC13A3-208ENST00000464518 PLEKHG5O94827 1062 aa18.74■□□□□ 0.59
SLC13A3-208ENST00000464518 SPINK5Q9NQ38 1064 aaPredicted RBP18.74■□□□□ 0.59
SLC13A3-208ENST00000464518 EZH2Q15910 746 aaKnown RBP18.73■□□□□ 0.59
SLC13A3-208ENST00000464518 PHRF1Q9P1Y6 1649 aaKnown RBP18.72■□□□□ 0.59
SLC13A3-208ENST00000464518 WASLO00401 505 aaPredicted RBP18.72■□□□□ 0.59
SLC13A3-208ENST00000464518 STAC3Q96MF2 364 aa18.72■□□□□ 0.59
SLC13A3-208ENST00000464518 PRR36Q9H6K5 1346 aa18.72■□□□□ 0.59
SLC13A3-208ENST00000464518 FAM182BQ5T319 152 aa18.7■□□□□ 0.58
SLC13A3-208ENST00000464518 BARGINQ6ZT62 677 aa18.7■□□□□ 0.58
SLC13A3-208ENST00000464518 NGDNQ8NEJ9 315 aaKnown RBP18.7■□□□□ 0.58
SLC13A3-208ENST00000464518 KIAA0232Q92628 1395 aa18.69■□□□□ 0.58
SLC13A3-208ENST00000464518 NUP188Q5SRE5 1749 aa18.69■□□□□ 0.58
SLC13A3-208ENST00000464518 C11orf95C9JLR9 678 aaPredicted RBP18.69■□□□□ 0.58
SLC13A3-208ENST00000464518 TRIM37O94972 964 aa18.68■□□□□ 0.58
SLC13A3-208ENST00000464518 APBA3O96018 575 aa18.67■□□□□ 0.58
SLC13A3-208ENST00000464518 HIRIP3Q9BW71 556 aaPredicted RBP18.67■□□□□ 0.58
SLC13A3-208ENST00000464518 TRAK1Q9UPV9 953 aa18.67■□□□□ 0.58
SLC13A3-208ENST00000464518 PAK3O75914 559 aaPredicted RBP18.66■□□□□ 0.58
SLC13A3-208ENST00000464518 NBPF8Q3BBV2 869 aa18.66■□□□□ 0.58
SLC13A3-208ENST00000464518 NBPF14Q5TI25 921 aa18.66■□□□□ 0.58
SLC13A3-208ENST00000464518 MINK1Q8N4C8 1332 aaPredicted RBP18.66■□□□□ 0.58
SLC13A3-208ENST00000464518 SSH2Q76I76 1423 aa18.66■□□□□ 0.58
SLC13A3-208ENST00000464518 THRAP3Q9Y2W1 955 aaKnown RBP18.65■□□□□ 0.58
SLC13A3-208ENST00000464518 POLR3AO14802 1390 aaPredicted RBP18.65■□□□□ 0.58
SLC13A3-208ENST00000464518 RGPD3A6NKT7 1758 aaPredicted RBP18.65■□□□□ 0.58
SLC13A3-208ENST00000464518 RGPD4Q7Z3J3 1758 aa18.65■□□□□ 0.58
SLC13A3-208ENST00000464518 YY1P25490 414 aa18.64■□□□□ 0.57
SLC13A3-208ENST00000464518 PDE3BQ13370 1112 aa18.64■□□□□ 0.57
SLC13A3-208ENST00000464518 CPDO75976 1380 aa18.64■□□□□ 0.57
SLC13A3-208ENST00000464518 NINLQ9Y2I6 1382 aa18.64■□□□□ 0.57
SLC13A3-208ENST00000464518 LMO7Q8WWI1 1683 aa18.63■□□□□ 0.57
SLC13A3-208ENST00000464518 ARHGEF28Q8N1W1 1705 aaKnown RBP18.63■□□□□ 0.57
SLC13A3-208ENST00000464518 NRKQ7Z2Y5 1582 aa18.63■□□□□ 0.57
SLC13A3-208ENST00000464518 PARP4Q9UKK3 1724 aaKnown RBP18.63■□□□□ 0.57
SLC13A3-208ENST00000464518 STRN4Q9NRL3 753 aa18.62■□□□□ 0.57
SLC13A3-208ENST00000464518 TOPAZ1Q8N9V7 1692 aa18.62■□□□□ 0.57
SLC13A3-208ENST00000464518 SPON1Q9HCB6 807 aa18.61■□□□□ 0.57
SLC13A3-208ENST00000464518 DSG3P32926 999 aa18.6■□□□□ 0.57
SLC13A3-208ENST00000464518 CHRNA2Q15822 529 aa18.6■□□□□ 0.57
SLC13A3-208ENST00000464518 TCP11L2Q8N4U5 519 aa18.6■□□□□ 0.57
SLC13A3-208ENST00000464518 NUDT16Q96DE0 195 aaKnown RBP18.6■□□□□ 0.57
SLC13A3-208ENST00000464518 EVA1CP58658 441 aa18.59■□□□□ 0.57
SLC13A3-208ENST00000464518 CAMTA1Q9Y6Y1 1673 aa18.59■□□□□ 0.57
SLC13A3-208ENST00000464518 USP19O94966 1318 aa18.58■□□□□ 0.57
SLC13A3-208ENST00000464518 KCNQ2O43526 872 aa18.58■□□□□ 0.56
SLC13A3-208ENST00000464518 BRD4O60885 1362 aaPredicted RBP18.57■□□□□ 0.56
SLC13A3-208ENST00000464518 ZC3H6P61129 1189 aaKnown RBP18.57■□□□□ 0.56
SLC13A3-208ENST00000464518 USP35Q9P2H5 1018 aa18.56■□□□□ 0.56
SLC13A3-208ENST00000464518 PPP1R1BQ9UD71 204 aaPredicted RBP18.56■□□□□ 0.56
SLC13A3-208ENST00000464518 CCDC61Q9Y6R9 512 aa18.56■□□□□ 0.56
SLC13A3-208ENST00000464518 OVOS2A0A0G2JMS6 1433 aa18.56■□□□□ 0.56
SLC13A3-208ENST00000464518 OVOS2A0A0J9YW53 1432 aa18.56■□□□□ 0.56
SLC13A3-208ENST00000464518 OVOS2Q6IE36 1432 aa18.56■□□□□ 0.56
SLC13A3-208ENST00000464518 ACEP12821 1306 aa18.55■□□□□ 0.56
SLC13A3-208ENST00000464518 COL5A2P05997 1499 aaPredicted RBP18.55■□□□□ 0.56
SLC13A3-208ENST00000464518 PLEKHG3A1L390 1219 aa18.55■□□□□ 0.56
SLC13A3-208ENST00000464518 PLSCR1O15162 318 aa18.55■□□□□ 0.56
SLC13A3-208ENST00000464518 PEAK1Q9H792 1746 aa18.54■□□□□ 0.56
SLC13A3-208ENST00000464518 LARP1Q6PKG0 1096 aaKnown RBP18.54■□□□□ 0.56
SLC13A3-208ENST00000464518 DCAF11Q8TEB1 546 aa18.54■□□□□ 0.56
SLC13A3-208ENST00000464518 CRB1P82279 1406 aa18.53■□□□□ 0.56
SLC13A3-208ENST00000464518 NLRP13Q86W25 1043 aa18.52■□□□□ 0.56
SLC13A3-208ENST00000464518 ABTB2Q8N961 1025 aa18.52■□□□□ 0.56
SLC13A3-208ENST00000464518 CDK19Q9BWU1 502 aa18.52■□□□□ 0.56
SLC13A3-208ENST00000464518 KIAA1210Q9ULL0 1709 aa18.52■□□□□ 0.55
SLC13A3-208ENST00000464518 BCL9O00512 1426 aa18.51■□□□□ 0.55
SLC13A3-208ENST00000464518 CASZ1Q86V15 1759 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms