RNA–Protein interactions for RNA: ENST00000456315.6

DEPDC1-202, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene DEPDC1, Length 5,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-202ENST00000456315 TRIM35Q9UPQ4 493 aa5.67□□□□□ -1.5
DEPDC1-202ENST00000456315 ERBINQ96RT1 1412 aa5.67□□□□□ -1.5
DEPDC1-202ENST00000456315 MVPQ14764 893 aaKnown RBP5.67□□□□□ -1.5
DEPDC1-202ENST00000456315 TRIM44Q96DX7 344 aaPredicted RBP5.67□□□□□ -1.5
DEPDC1-202ENST00000456315 CGNQ9P2M7 1197 aaKnown RBP5.67□□□□□ -1.5
DEPDC1-202ENST00000456315 ADCY10Q96PN6 1610 aa5.67□□□□□ -1.5
DEPDC1-202ENST00000456315 PDIA4P13667 645 aaKnown RBP5.67□□□□□ -1.5
DEPDC1-202ENST00000456315 BECN1Q14457 450 aa5.67□□□□□ -1.5
DEPDC1-202ENST00000456315 MCTP1Q6DN14 999 aa5.67□□□□□ -1.5
DEPDC1-202ENST00000456315 SNX21Q969T3 373 aa5.67□□□□□ -1.5
DEPDC1-202ENST00000456315 TRERF1Q96PN7 1200 aa5.67□□□□□ -1.5
DEPDC1-202ENST00000456315 PALD1Q9ULE6 856 aa5.67□□□□□ -1.5
DEPDC1-202ENST00000456315 FAM135AQ9P2D6 1515 aa5.67□□□□□ -1.5
DEPDC1-202ENST00000456315 EXOSC9Q06265 439 aaKnown RBP5.67□□□□□ -1.5
DEPDC1-202ENST00000456315 LRMPQ12912 555 aa5.67□□□□□ -1.5
DEPDC1-202ENST00000456315 E9PSI1 815 aa5.67□□□□□ -1.5
DEPDC1-202ENST00000456315 IRX5P78411 483 aaPredicted RBP5.67□□□□□ -1.5
DEPDC1-202ENST00000456315 CHMP4AQ9BY43 222 aa5.67□□□□□ -1.5
DEPDC1-202ENST00000456315 TERF1P54274 439 aa5.66□□□□□ -1.5
DEPDC1-202ENST00000456315 CFAP70Q5T0N1 1121 aa5.66□□□□□ -1.5
DEPDC1-202ENST00000456315 MYRIPQ8NFW9 859 aa5.66□□□□□ -1.5
DEPDC1-202ENST00000456315 URB2Q14146 1524 aaKnown RBP5.66□□□□□ -1.5
DEPDC1-202ENST00000456315 FANCD2Q9BXW9 1451 aa5.66□□□□□ -1.5
DEPDC1-202ENST00000456315 PRR29P0C7W0 189 aa5.66□□□□□ -1.5
DEPDC1-202ENST00000456315 TSHZ3Q63HK5 1081 aa5.66□□□□□ -1.5
DEPDC1-202ENST00000456315 LRRN4CLQ8ND94 238 aa5.66□□□□□ -1.5
DEPDC1-202ENST00000456315 LARP6Q9BRS8 491 aaKnown RBP5.66□□□□□ -1.5
DEPDC1-202ENST00000456315 CCDC94Q9BW85 323 aaPredicted RBP5.66□□□□□ -1.5
DEPDC1-202ENST00000456315 IBTKQ9P2D0 1353 aaPredicted RBP5.66□□□□□ -1.5
DEPDC1-202ENST00000456315 FANCGO15287 622 aa5.66□□□□□ -1.5
DEPDC1-202ENST00000456315 SLC52A1Q9NWF4 448 aa5.66□□□□□ -1.5
DEPDC1-202ENST00000456315 USP25Q9UHP3 1055 aa5.66□□□□□ -1.5
DEPDC1-202ENST00000456315 MTHFSP49914 203 aa5.66□□□□□ -1.5
DEPDC1-202ENST00000456315 PAXIP1Q6ZW49 1069 aaPredicted RBP5.66□□□□□ -1.5
DEPDC1-202ENST00000456315 PPIP5K1Q6PFW1 1433 aa5.65□□□□□ -1.5
DEPDC1-202ENST00000456315 UTP14CQ5TAP6 766 aaKnown RBP5.65□□□□□ -1.5
DEPDC1-202ENST00000456315 GRWD1Q9BQ67 446 aaKnown RBP eCLIP5.65□□□□□ -1.5
DEPDC1-202ENST00000456315 CEP170Q5SW79 1584 aa5.65□□□□□ -1.5
DEPDC1-202ENST00000456315 ELL2O00472 640 aaPredicted RBP5.65□□□□□ -1.51
DEPDC1-202ENST00000456315 DYNC1I1O14576 645 aa5.65□□□□□ -1.51
DEPDC1-202ENST00000456315 CCDC173Q0VFZ6 552 aa5.65□□□□□ -1.51
DEPDC1-202ENST00000456315 WDR43Q15061 677 aaKnown RBP eCLIP5.65□□□□□ -1.51
DEPDC1-202ENST00000456315 DISP1Q96F81 1524 aa5.65□□□□□ -1.51
DEPDC1-202ENST00000456315 NOS1P29475 1434 aa5.65□□□□□ -1.51
DEPDC1-202ENST00000456315 A0A087WWV3 80 aa5.65□□□□□ -1.51
DEPDC1-202ENST00000456315 NCBP1Q09161 790 aaKnown RBP5.65□□□□□ -1.51
DEPDC1-202ENST00000456315 SYTL4Q96C24 671 aaPredicted RBP5.65□□□□□ -1.51
DEPDC1-202ENST00000456315 MUC3AQ02505 3323 aa5.64□□□□□ -1.51
DEPDC1-202ENST00000456315 RIOK3O14730 519 aaKnown RBP5.64□□□□□ -1.51
DEPDC1-202ENST00000456315 HCLS1P14317 486 aaPredicted RBP5.64□□□□□ -1.51
DEPDC1-202ENST00000456315 GTF2F1P35269 517 aaKnown RBP eCLIP5.64□□□□□ -1.51
DEPDC1-202ENST00000456315 ARID5BQ14865 1188 aa5.64□□□□□ -1.51
DEPDC1-202ENST00000456315 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.64□□□□□ -1.51
DEPDC1-202ENST00000456315 NRBP1Q9UHY1 535 aa5.64□□□□□ -1.51
DEPDC1-202ENST00000456315 V9GYY5 206 aaPredicted RBP5.64□□□□□ -1.51
DEPDC1-202ENST00000456315 ABCC2Q92887 1545 aa5.64□□□□□ -1.51
DEPDC1-202ENST00000456315 ARHGAP31Q2M1Z3 1444 aa5.64□□□□□ -1.51
DEPDC1-202ENST00000456315 CTTNBP2Q8WZ74 1663 aa5.64□□□□□ -1.51
DEPDC1-202ENST00000456315 KIAA1524Q8TCG1 905 aa5.64□□□□□ -1.51
DEPDC1-202ENST00000456315 ZNF446Q9NWS9 450 aa5.64□□□□□ -1.51
DEPDC1-202ENST00000456315 GLI2P10070 1586 aa5.64□□□□□ -1.51
DEPDC1-202ENST00000456315 MYOM1P52179 1685 aa5.64□□□□□ -1.51
DEPDC1-202ENST00000456315 ZBTB7BO15156 539 aaPredicted RBP5.64□□□□□ -1.51
DEPDC1-202ENST00000456315 NUCB1Q02818 461 aa5.64□□□□□ -1.51
DEPDC1-202ENST00000456315 SENP3Q9H4L4 574 aaPredicted RBP5.64□□□□□ -1.51
DEPDC1-202ENST00000456315 PRDM15P57071 1507 aaPredicted RBP5.64□□□□□ -1.51
DEPDC1-202ENST00000456315 HDAC1Q13547 482 aaPredicted RBP5.64□□□□□ -1.51
DEPDC1-202ENST00000456315 TPRNQ4KMQ1 711 aa5.64□□□□□ -1.51
DEPDC1-202ENST00000456315 PIK3C2GO75747 1445 aa5.63□□□□□ -1.51
DEPDC1-202ENST00000456315 KNSTRNQ9Y448 316 aa5.63□□□□□ -1.51
DEPDC1-202ENST00000456315 K7ELQ4 463 aaPredicted RBP5.63□□□□□ -1.51
DEPDC1-202ENST00000456315 FKBP5Q13451 457 aaPredicted RBP5.63□□□□□ -1.51
DEPDC1-202ENST00000456315 FAM173BQ6P4H8 233 aa5.63□□□□□ -1.51
DEPDC1-202ENST00000456315 NOB1Q9ULX3 412 aaKnown RBP5.63□□□□□ -1.51
DEPDC1-202ENST00000456315 NOLC1Q14978 699 aaKnown RBP eCLIP5.63□□□□□ -1.51
DEPDC1-202ENST00000456315 FUCA2Q9BTY2 467 aa5.63□□□□□ -1.51
DEPDC1-202ENST00000456315 ANKRD7Q92527 254 aa5.63□□□□□ -1.51
DEPDC1-202ENST00000456315 UPF3BQ9BZI7 483 aaKnown RBP5.63□□□□□ -1.51
DEPDC1-202ENST00000456315 CTNNA3Q9UI47 895 aa5.63□□□□□ -1.51
DEPDC1-202ENST00000456315 SHPRHQ149N8 1683 aa5.62□□□□□ -1.51
DEPDC1-202ENST00000456315 SOX12O15370 315 aa5.62□□□□□ -1.51
DEPDC1-202ENST00000456315 ATF7IPQ6VMQ6 1270 aa5.62□□□□□ -1.51
DEPDC1-202ENST00000456315 DZIP1LQ8IYY4 767 aaKnown RBP5.62□□□□□ -1.51
DEPDC1-202ENST00000456315 ZCCHC17Q9NP64 241 aaKnown RBP5.62□□□□□ -1.51
DEPDC1-202ENST00000456315 GRIN2AQ12879 1464 aa5.62□□□□□ -1.51
DEPDC1-202ENST00000456315 PLEKHH2Q8IVE3 1493 aa5.62□□□□□ -1.51
DEPDC1-202ENST00000456315 NCLP19338 710 aaKnown RBP5.62□□□□□ -1.51
DEPDC1-202ENST00000456315 PHACTR3Q96KR7 559 aa5.62□□□□□ -1.51
DEPDC1-202ENST00000456315 LCMT1Q9UIC8 334 aa5.62□□□□□ -1.51
DEPDC1-202ENST00000456315 ISY1Q9ULR0 285 aaKnown RBP5.62□□□□□ -1.51
DEPDC1-202ENST00000456315 ADGRL2O95490 1459 aa5.62□□□□□ -1.51
DEPDC1-202ENST00000456315 DDX11L8A8MPP1 907 aa5.62□□□□□ -1.51
DEPDC1-202ENST00000456315 BMP2KLQ5H9B9 411 aa5.62□□□□□ -1.51
DEPDC1-202ENST00000456315 UNC5CLQ8IV45 518 aa5.62□□□□□ -1.51
DEPDC1-202ENST00000456315 PLEKHM2Q8IWE5 1019 aa5.62□□□□□ -1.51
DEPDC1-202ENST00000456315 ADGRF5Q8IZF2 1346 aa5.62□□□□□ -1.51
DEPDC1-202ENST00000456315 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.62□□□□□ -1.51
DEPDC1-202ENST00000456315 CHD1LQ86WJ1 897 aa5.61□□□□□ -1.51
DEPDC1-202ENST00000456315 NGEFQ8N5V2 710 aa5.61□□□□□ -1.51
DEPDC1-202ENST00000456315 PIBF1Q8WXW3 757 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms