RNA–Protein interactions for RNA: ENST00000441222.7

USP46-201, Transcript of ubiquitin specific peptidase 46, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP46, Length 7,954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-201ENST00000441222 PPFIBP1Q86W92 1011 aa7.94□□□□□ -1.14
USP46-201ENST00000441222 PRKRIP1Q9H875 184 aaPredicted RBP7.94□□□□□ -1.14
USP46-201ENST00000441222 ATF3P18847 181 aa7.94□□□□□ -1.14
USP46-201ENST00000441222 CCDC30Q5VVM6 783 aa7.94□□□□□ -1.14
USP46-201ENST00000441222 AEBP1Q8IUX7 1158 aa7.94□□□□□ -1.14
USP46-201ENST00000441222 DHX57Q6P158 1386 aaKnown RBP7.94□□□□□ -1.14
USP46-201ENST00000441222 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.93□□□□□ -1.14
USP46-201ENST00000441222 APAF1O14727 1248 aa7.93□□□□□ -1.14
USP46-201ENST00000441222 DEF6Q9H4E7 631 aa7.93□□□□□ -1.14
USP46-201ENST00000441222 CBFA2T2O43439 604 aa7.93□□□□□ -1.14
USP46-201ENST00000441222 CCDC181Q5TID7 509 aa7.93□□□□□ -1.14
USP46-201ENST00000441222 TRIM22Q8IYM9 498 aa7.93□□□□□ -1.14
USP46-201ENST00000441222 TSPY26PQ9H489 355 aa7.93□□□□□ -1.14
USP46-201ENST00000441222 SCAPERQ9BY12 1400 aa7.93□□□□□ -1.14
USP46-201ENST00000441222 ENOX2Q16206 610 aaKnown RBP7.93□□□□□ -1.14
USP46-201ENST00000441222 SMG6Q86US8 1419 aaKnown RBP7.93□□□□□ -1.14
USP46-201ENST00000441222 PDCL3Q9H2J4 239 aa7.93□□□□□ -1.14
USP46-201ENST00000441222 CCDC192P0DO97 292 aa7.92□□□□□ -1.14
USP46-201ENST00000441222 EXOC6Q8TAG9 804 aa7.92□□□□□ -1.14
USP46-201ENST00000441222 BMP2KQ9NSY1 1161 aaPredicted RBP7.92□□□□□ -1.14
USP46-201ENST00000441222 CETN2P41208 172 aa7.92□□□□□ -1.14
USP46-201ENST00000441222 KANK4Q5T7N3 995 aaPredicted RBP7.92□□□□□ -1.14
USP46-201ENST00000441222 NACAP1Q9BZK3 213 aa7.92□□□□□ -1.14
USP46-201ENST00000441222 GAS2L2Q8NHY3 880 aa7.92□□□□□ -1.14
USP46-201ENST00000441222 LNPKQ9C0E8 428 aa7.92□□□□□ -1.14
USP46-201ENST00000441222 CDKL5O76039 1030 aa7.91□□□□□ -1.14
USP46-201ENST00000441222 ZSCAN25Q6NSZ9 544 aa7.91□□□□□ -1.14
USP46-201ENST00000441222 CCDC91Q7Z6B0 441 aa7.91□□□□□ -1.14
USP46-201ENST00000441222 FSD1Q9BTV5 496 aa7.91□□□□□ -1.14
USP46-201ENST00000441222 PLIN1O60240 522 aa7.91□□□□□ -1.14
USP46-201ENST00000441222 ANKRD62A6NC57 917 aa7.91□□□□□ -1.14
USP46-201ENST00000441222 TTLL5Q6EMB2 1281 aa7.91□□□□□ -1.14
USP46-201ENST00000441222 CCDC88BA6NC98 1476 aa7.91□□□□□ -1.14
USP46-201ENST00000441222 STK38Q15208 465 aa7.91□□□□□ -1.14
USP46-201ENST00000441222 MINK1Q8N4C8 1332 aaPredicted RBP7.91□□□□□ -1.14
USP46-201ENST00000441222 SERPINC1P01008 464 aa7.91□□□□□ -1.14
USP46-201ENST00000441222 POTEJP0CG39 1038 aa7.91□□□□□ -1.14
USP46-201ENST00000441222 NUTM2DQ5VT03 806 aaPredicted RBP7.91□□□□□ -1.14
USP46-201ENST00000441222 TAF3Q5VWG9 929 aa7.91□□□□□ -1.14
USP46-201ENST00000441222 SAMD1Q6SPF0 538 aaPredicted RBP7.91□□□□□ -1.14
USP46-201ENST00000441222 CCDC158Q5M9N0 1113 aa7.91□□□□□ -1.14
USP46-201ENST00000441222 NOL7Q9UMY1 257 aaKnown RBP7.91□□□□□ -1.14
USP46-201ENST00000441222 CFAP45Q9UL16 551 aa7.9□□□□□ -1.14
USP46-201ENST00000441222 RRBP1Q9P2E9 1410 aaKnown RBP7.9□□□□□ -1.14
USP46-201ENST00000441222 FEZ1Q99689 392 aa7.9□□□□□ -1.14
USP46-201ENST00000441222 SRCIN1Q9C0H9 1055 aa7.9□□□□□ -1.14
USP46-201ENST00000441222 CCDC7Q96M83 1385 aa7.9□□□□□ -1.14
USP46-201ENST00000441222 FYB1O15117 783 aa7.9□□□□□ -1.14
USP46-201ENST00000441222 NECTIN2Q92692 538 aa7.9□□□□□ -1.14
USP46-201ENST00000441222 GCC1Q96CN9 775 aa7.9□□□□□ -1.14
USP46-201ENST00000441222 TRAK2O60296 914 aa7.9□□□□□ -1.15
USP46-201ENST00000441222 SLC26A8Q96RN1 970 aa7.9□□□□□ -1.15
USP46-201ENST00000441222 SLC4A3P48751 1232 aa7.9□□□□□ -1.15
USP46-201ENST00000441222 JAKMIP3Q5VZ66 844 aa7.9□□□□□ -1.15
USP46-201ENST00000441222 DYDC1Q8WWB3 177 aa7.9□□□□□ -1.15
USP46-201ENST00000441222 JPH4Q96JJ6 628 aa7.9□□□□□ -1.15
USP46-201ENST00000441222 MCM3P25205 808 aa7.89□□□□□ -1.15
USP46-201ENST00000441222 WDR33Q9C0J8 1336 aaKnown RBP7.89□□□□□ -1.15
USP46-201ENST00000441222 FOSBP53539 338 aa7.89□□□□□ -1.15
USP46-201ENST00000441222 PDCL2Q8N4E4 241 aa7.89□□□□□ -1.15
USP46-201ENST00000441222 BRPF1P55201 1214 aaPredicted RBP7.89□□□□□ -1.15
USP46-201ENST00000441222 TOP2AP11388 1531 aaKnown RBP7.89□□□□□ -1.15
USP46-201ENST00000441222 KRT85P78386 507 aa7.89□□□□□ -1.15
USP46-201ENST00000441222 CCDC57Q2TAC2 916 aa7.89□□□□□ -1.15
USP46-201ENST00000441222 ZNF397Q8NF99 534 aaPredicted RBP7.89□□□□□ -1.15
USP46-201ENST00000441222 GPRASP1Q5JY77 1395 aa7.89□□□□□ -1.15
USP46-201ENST00000441222 HSP90AB3PQ58FF7 597 aa7.89□□□□□ -1.15
USP46-201ENST00000441222 CCDC112Q8NEF3 446 aa7.89□□□□□ -1.15
USP46-201ENST00000441222 GBP3Q9H0R5 595 aa7.89□□□□□ -1.15
USP46-201ENST00000441222 GNAI2P04899 355 aa7.89□□□□□ -1.15
USP46-201ENST00000441222 MYOM3Q5VTT5 1437 aa7.89□□□□□ -1.15
USP46-201ENST00000441222 KIF2AO00139 706 aaPredicted RBP7.89□□□□□ -1.15
USP46-201ENST00000441222 PPP1R12BO60237 982 aaPredicted RBP7.89□□□□□ -1.15
USP46-201ENST00000441222 STAMBPO95630 424 aa7.89□□□□□ -1.15
USP46-201ENST00000441222 SOGA3Q5TF21 947 aa7.89□□□□□ -1.15
USP46-201ENST00000441222 PLCD4Q9BRC7 762 aa7.88□□□□□ -1.15
USP46-201ENST00000441222 CYP46A1Q9Y6A2 500 aa7.88□□□□□ -1.15
USP46-201ENST00000441222 BRD4O60885 1362 aaPredicted RBP7.88□□□□□ -1.15
USP46-201ENST00000441222 IMMTQ16891 758 aaKnown RBP7.88□□□□□ -1.15
USP46-201ENST00000441222 MAP9Q49MG5 647 aa7.88□□□□□ -1.15
USP46-201ENST00000441222 PLEKHO1Q53GL0 409 aaPredicted RBP7.88□□□□□ -1.15
USP46-201ENST00000441222 SMTNL1A8MU46 457 aa7.88□□□□□ -1.15
USP46-201ENST00000441222 TNMDQ9H2S6 317 aa7.88□□□□□ -1.15
USP46-201ENST00000441222 FYCO1Q9BQS8 1478 aa7.88□□□□□ -1.15
USP46-201ENST00000441222 NEK4P51957 841 aa7.88□□□□□ -1.15
USP46-201ENST00000441222 WASF1Q92558 559 aa7.88□□□□□ -1.15
USP46-201ENST00000441222 LRRCC1Q9C099 1032 aa7.88□□□□□ -1.15
USP46-201ENST00000441222 CCDC69A6NI79 296 aa7.88□□□□□ -1.15
USP46-201ENST00000441222 NEBLO76041 1014 aa7.88□□□□□ -1.15
USP46-201ENST00000441222 CEP131Q9UPN4 1083 aa7.88□□□□□ -1.15
USP46-201ENST00000441222 SURF6O75683 361 aaKnown RBP7.87□□□□□ -1.15
USP46-201ENST00000441222 NFKBIBQ15653 356 aa7.87□□□□□ -1.15
USP46-201ENST00000441222 TTC39AQ5SRH9 613 aa7.87□□□□□ -1.15
USP46-201ENST00000441222 PNISRQ8TF01 805 aaKnown RBP7.87□□□□□ -1.15
USP46-201ENST00000441222 ZNF287Q9HBT7 754 aa7.87□□□□□ -1.15
USP46-201ENST00000441222 KRT32Q14532 448 aa7.87□□□□□ -1.15
USP46-201ENST00000441222 PPM1EQ8WY54 764 aa7.87□□□□□ -1.15
USP46-201ENST00000441222 CTNNA3Q9UI47 895 aa7.87□□□□□ -1.15
USP46-201ENST00000441222 FHOD3Q2V2M9 1422 aa7.87□□□□□ -1.15
USP46-201ENST00000441222 CNTLNQ9NXG0 1405 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms