RNA–Protein interactions for RNA: ENST00000427447.5

LINC00649-203, long intergenic non-protein coding RNA 649, humanhuman

TSL 1 (best) BASIC

Gene LINC00649, Length 9,124 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-203ENST00000427447 MAP7D1Q3KQU3 841 aa9.21□□□□□ -0.93
LINC00649-203ENST00000427447 CEP128Q6ZU80 1094 aa9.21□□□□□ -0.93
LINC00649-203ENST00000427447 CCDC114Q96M63 670 aa9.21□□□□□ -0.93
LINC00649-203ENST00000427447 P3H3Q8IVL6 736 aa9.21□□□□□ -0.93
LINC00649-203ENST00000427447 MACROD2A1Z1Q3 448 aa9.21□□□□□ -0.94
LINC00649-203ENST00000427447 ANKRD18BA2A2Z9 1011 aa9.21□□□□□ -0.94
LINC00649-203ENST00000427447 SOGA3Q5TF21 947 aa9.21□□□□□ -0.94
LINC00649-203ENST00000427447 DNAJC8O75937 253 aaPredicted RBP9.21□□□□□ -0.94
LINC00649-203ENST00000427447 GFAPP14136 432 aa9.21□□□□□ -0.94
LINC00649-203ENST00000427447 PSMA4P25789 261 aaKnown RBP9.21□□□□□ -0.94
LINC00649-203ENST00000427447 CCDC181Q5TID7 509 aa9.21□□□□□ -0.94
LINC00649-203ENST00000427447 VIMP08670 466 aaKnown RBP9.21□□□□□ -0.94
LINC00649-203ENST00000427447 B4GALNT3Q6L9W6 998 aa9.21□□□□□ -0.94
LINC00649-203ENST00000427447 MFAP1P55081 439 aaKnown RBP9.2□□□□□ -0.94
LINC00649-203ENST00000427447 GOPCQ9HD26 462 aa9.2□□□□□ -0.94
LINC00649-203ENST00000427447 SASS6Q6UVJ0 657 aa9.2□□□□□ -0.94
LINC00649-203ENST00000427447 ARMCX6Q7L4S7 300 aa9.2□□□□□ -0.94
LINC00649-203ENST00000427447 RFC1P35251 1148 aaPredicted RBP9.2□□□□□ -0.94
LINC00649-203ENST00000427447 MAP2K1Q02750 393 aaPredicted RBP9.2□□□□□ -0.94
LINC00649-203ENST00000427447 PABPN1Q86U42 306 aaKnown RBP eCLIP9.2□□□□□ -0.94
LINC00649-203ENST00000427447 ALS2CR12Q96Q35 445 aa9.2□□□□□ -0.94
LINC00649-203ENST00000427447 MAP7Q14244 749 aa9.2□□□□□ -0.94
LINC00649-203ENST00000427447 WDR63Q8IWG1 891 aa9.2□□□□□ -0.94
LINC00649-203ENST00000427447 TTC19Q6DKK2 380 aaPredicted RBP9.2□□□□□ -0.94
LINC00649-203ENST00000427447 LRRC43Q8N309 656 aa9.19□□□□□ -0.94
LINC00649-203ENST00000427447 RAB3IL1Q8TBN0 382 aa9.19□□□□□ -0.94
LINC00649-203ENST00000427447 DDX23Q9BUQ8 820 aaKnown RBP9.19□□□□□ -0.94
LINC00649-203ENST00000427447 CCDC27Q2M243 656 aa9.19□□□□□ -0.94
LINC00649-203ENST00000427447 NBPF6Q5VWK0 638 aa9.19□□□□□ -0.94
LINC00649-203ENST00000427447 NBPF5PQ86XG9 351 aaPredicted RBP9.19□□□□□ -0.94
LINC00649-203ENST00000427447 NBPF4Q96M43 638 aa9.19□□□□□ -0.94
LINC00649-203ENST00000427447 ODF2Q5BJF6 829 aa9.19□□□□□ -0.94
LINC00649-203ENST00000427447 CRACR2AQ9BSW2 395 aa9.19□□□□□ -0.94
LINC00649-203ENST00000427447 CNKSR2Q8WXI2 1034 aa9.19□□□□□ -0.94
LINC00649-203ENST00000427447 MCM5P33992 734 aa9.19□□□□□ -0.94
LINC00649-203ENST00000427447 NOL10Q9BSC4 688 aaKnown RBP9.19□□□□□ -0.94
LINC00649-203ENST00000427447 UBE4AQ14139 1066 aa9.19□□□□□ -0.94
LINC00649-203ENST00000427447 NAA25Q14CX7 972 aa9.19□□□□□ -0.94
LINC00649-203ENST00000427447 STMN2Q93045 179 aa9.19□□□□□ -0.94
LINC00649-203ENST00000427447 MIER3Q7Z3K6 550 aa9.18□□□□□ -0.94
LINC00649-203ENST00000427447 RLBP1P12271 317 aa9.18□□□□□ -0.94
LINC00649-203ENST00000427447 TSPYL2Q9H2G4 693 aaPredicted RBP9.18□□□□□ -0.94
LINC00649-203ENST00000427447 GOLGA3Q08378 1498 aa9.18□□□□□ -0.94
LINC00649-203ENST00000427447 FILIP1LQ4L180 1135 aa9.18□□□□□ -0.94
LINC00649-203ENST00000427447 CHMP5Q9NZZ3 219 aa9.18□□□□□ -0.94
LINC00649-203ENST00000427447 AAMPQ13685 434 aa9.18□□□□□ -0.94
LINC00649-203ENST00000427447 TAF7Q15545 349 aaPredicted RBP9.18□□□□□ -0.94
LINC00649-203ENST00000427447 GRIPAP1Q4V328 841 aa9.18□□□□□ -0.94
LINC00649-203ENST00000427447 KRT222Q8N1A0 295 aa9.18□□□□□ -0.94
LINC00649-203ENST00000427447 TPX2Q9ULW0 747 aaKnown RBP9.18□□□□□ -0.94
LINC00649-203ENST00000427447 LMNTD2Q8IXW0 634 aa9.18□□□□□ -0.94
LINC00649-203ENST00000427447 VCXQ9H320 206 aa9.18□□□□□ -0.94
LINC00649-203ENST00000427447 ZSCAN30Q86W11 494 aa9.18□□□□□ -0.94
LINC00649-203ENST00000427447 ZCRB1Q8TBF4 217 aaKnown RBP9.18□□□□□ -0.94
LINC00649-203ENST00000427447 FAM114A2Q9NRY5 505 aa9.17□□□□□ -0.94
LINC00649-203ENST00000427447 LUC7LQ9NQ29 371 aaKnown RBP9.17□□□□□ -0.94
LINC00649-203ENST00000427447 POTEB2H3BUK9 544 aa9.17□□□□□ -0.94
LINC00649-203ENST00000427447 IL27Q8NEV9 243 aa9.17□□□□□ -0.94
LINC00649-203ENST00000427447 NEBLO76041 1014 aa9.17□□□□□ -0.94
LINC00649-203ENST00000427447 NAA16Q6N069 864 aaPredicted RBP9.17□□□□□ -0.94
LINC00649-203ENST00000427447 LRRC23Q53EV4 343 aaPredicted RBP9.17□□□□□ -0.94
LINC00649-203ENST00000427447 FERP16591 822 aa9.17□□□□□ -0.94
LINC00649-203ENST00000427447 ZKSCAN8Q15776 578 aaPredicted RBP9.17□□□□□ -0.94
LINC00649-203ENST00000427447 FILIP1Q7Z7B0 1213 aa9.17□□□□□ -0.94
LINC00649-203ENST00000427447 CCDC110Q8TBZ0 833 aa9.17□□□□□ -0.94
LINC00649-203ENST00000427447 TOMM22Q9NS69 142 aa9.17□□□□□ -0.94
LINC00649-203ENST00000427447 VCX3BQ9H321 246 aa9.16□□□□□ -0.94
LINC00649-203ENST00000427447 ARMC9Q7Z3E5 817 aa9.16□□□□□ -0.94
LINC00649-203ENST00000427447 BRMS1Q9HCU9 246 aa9.16□□□□□ -0.94
LINC00649-203ENST00000427447 ATP6V1E2Q96A05 226 aa9.16□□□□□ -0.94
LINC00649-203ENST00000427447 PRIMPOLQ96LW4 560 aa9.16□□□□□ -0.94
LINC00649-203ENST00000427447 MBD3O95983 291 aa9.16□□□□□ -0.94
LINC00649-203ENST00000427447 GIMAP4Q9NUV9 329 aa9.16□□□□□ -0.94
LINC00649-203ENST00000427447 TRIM21P19474 475 aaKnown RBP9.16□□□□□ -0.94
LINC00649-203ENST00000427447 CBX1P83916 185 aa9.16□□□□□ -0.94
LINC00649-203ENST00000427447 UBXN4Q92575 508 aa9.16□□□□□ -0.94
LINC00649-203ENST00000427447 ZCCHC6Q5VYS8 1495 aaKnown RBP9.16□□□□□ -0.94
LINC00649-203ENST00000427447 DDX27Q96GQ7 796 aaKnown RBP9.16□□□□□ -0.94
LINC00649-203ENST00000427447 SMC4Q9NTJ3 1288 aa9.16□□□□□ -0.94
LINC00649-203ENST00000427447 A6NNZ2 444 aa9.16□□□□□ -0.94
LINC00649-203ENST00000427447 TUBB8Q3ZCM7 444 aa9.16□□□□□ -0.94
LINC00649-203ENST00000427447 ANAPC4Q9UJX5 808 aa9.16□□□□□ -0.94
LINC00649-203ENST00000427447 ZWINTO95229 277 aa9.15□□□□□ -0.94
LINC00649-203ENST00000427447 PIK3R5Q8WYR1 880 aa9.15□□□□□ -0.94
LINC00649-203ENST00000427447 ERC2O15083 957 aa9.15□□□□□ -0.94
LINC00649-203ENST00000427447 PPP4R3BQ5MIZ7 849 aa9.15□□□□□ -0.94
LINC00649-203ENST00000427447 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.15□□□□□ -0.94
LINC00649-203ENST00000427447 IKBKGQ9Y6K9 419 aa9.15□□□□□ -0.94
LINC00649-203ENST00000427447 NLRP5P59047 1200 aa9.15□□□□□ -0.94
LINC00649-203ENST00000427447 EFCC1Q9HA90 598 aa9.15□□□□□ -0.94
LINC00649-203ENST00000427447 TUBB4BP68371 445 aa9.15□□□□□ -0.94
LINC00649-203ENST00000427447 CEBPZQ03701 1054 aaKnown RBP9.15□□□□□ -0.94
LINC00649-203ENST00000427447 AIMP1Q12904 312 aaKnown RBP9.15□□□□□ -0.94
LINC00649-203ENST00000427447 INF2Q27J81 1249 aa9.15□□□□□ -0.95
LINC00649-203ENST00000427447 PRPF38AQ8NAV1 312 aaKnown RBP9.15□□□□□ -0.95
LINC00649-203ENST00000427447 POLD1P28340 1107 aa9.15□□□□□ -0.95
LINC00649-203ENST00000427447 TXLNAP40222 546 aa9.15□□□□□ -0.95
LINC00649-203ENST00000427447 MPP4Q96JB8 637 aa9.15□□□□□ -0.95
LINC00649-203ENST00000427447 RB1CC1Q8TDY2 1594 aa9.14□□□□□ -0.95
LINC00649-203ENST00000427447 CCDC160A6NGH7 325 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms