RNA–Protein interactions for RNA: ENST00000419442.1

RAPGEF1-205, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 683 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-205ENST00000419442 LMOD2Q6P5Q4 547 aa15.97■□□□□ 0.15
RAPGEF1-205ENST00000419442 SPATA31A1Q5TZJ5 1347 aa15.95■□□□□ 0.14
RAPGEF1-205ENST00000419442 APBA3O96018 575 aa15.95■□□□□ 0.14
RAPGEF1-205ENST00000419442 SPON1Q9HCB6 807 aa15.95■□□□□ 0.14
RAPGEF1-205ENST00000419442 DCAF8L1A6NGE4 600 aa15.94■□□□□ 0.14
RAPGEF1-205ENST00000419442 KCNQ2O43526 872 aa15.94■□□□□ 0.14
RAPGEF1-205ENST00000419442 RGPD3A6NKT7 1758 aaPredicted RBP15.93■□□□□ 0.14
RAPGEF1-205ENST00000419442 RGPD4Q7Z3J3 1758 aa15.93■□□□□ 0.14
RAPGEF1-205ENST00000419442 CASZ1Q86V15 1759 aa15.93■□□□□ 0.14
RAPGEF1-205ENST00000419442 NBPF8Q3BBV2 869 aa15.93■□□□□ 0.14
RAPGEF1-205ENST00000419442 NBPF14Q5TI25 921 aa15.93■□□□□ 0.14
RAPGEF1-205ENST00000419442 PPP1R1BQ9UD71 204 aaPredicted RBP15.92■□□□□ 0.14
RAPGEF1-205ENST00000419442 PHRF1Q9P1Y6 1649 aaKnown RBP15.91■□□□□ 0.14
RAPGEF1-205ENST00000419442 DLC1Q96QB1 1528 aa15.91■□□□□ 0.14
RAPGEF1-205ENST00000419442 PMFBP1Q8TBY8 1022 aa15.91■□□□□ 0.14
RAPGEF1-205ENST00000419442 ZNF784Q8NCA9 323 aaPredicted RBP15.9■□□□□ 0.14
RAPGEF1-205ENST00000419442 SLC4A1APQ9BWU0 796 aaKnown RBP15.9■□□□□ 0.14
RAPGEF1-205ENST00000419442 CHD4Q14839 1912 aa15.9■□□□□ 0.14
RAPGEF1-205ENST00000419442 IFFO2Q5TF58 517 aa15.89■□□□□ 0.13
RAPGEF1-205ENST00000419442 C14orf93Q9H972 538 aaKnown RBP15.89■□□□□ 0.13
RAPGEF1-205ENST00000419442 ACIN1Q9UKV3 1341 aaKnown RBP15.89■□□□□ 0.13
RAPGEF1-205ENST00000419442 GPRASP1Q5JY77 1395 aa15.88■□□□□ 0.13
RAPGEF1-205ENST00000419442 NRKQ7Z2Y5 1582 aa15.88■□□□□ 0.13
RAPGEF1-205ENST00000419442 BARGINQ6ZT62 677 aa15.88■□□□□ 0.13
RAPGEF1-205ENST00000419442 PRDM11Q9NQV5 511 aa15.88■□□□□ 0.13
RAPGEF1-205ENST00000419442 DHX57Q6P158 1386 aaKnown RBP15.87■□□□□ 0.13
RAPGEF1-205ENST00000419442 PARP4Q9UKK3 1724 aaKnown RBP15.87■□□□□ 0.13
RAPGEF1-205ENST00000419442 PEAK1Q9H792 1746 aa15.86■□□□□ 0.13
RAPGEF1-205ENST00000419442 TULP4Q9NRJ4 1543 aa15.86■□□□□ 0.13
RAPGEF1-205ENST00000419442 RGL3Q3MIN7 710 aa15.86■□□□□ 0.13
RAPGEF1-205ENST00000419442 PRAM1Q96QH2 718 aa15.86■□□□□ 0.13
RAPGEF1-205ENST00000419442 SBF2Q86WG5 1849 aa15.86■□□□□ 0.13
RAPGEF1-205ENST00000419442 KIAA0232Q92628 1395 aa15.86■□□□□ 0.13
RAPGEF1-205ENST00000419442 MYOM1P52179 1685 aa15.86■□□□□ 0.13
RAPGEF1-205ENST00000419442 PRR36Q9H6K5 1346 aa15.85■□□□□ 0.13
RAPGEF1-205ENST00000419442 LMO7Q8WWI1 1683 aa15.84■□□□□ 0.13
RAPGEF1-205ENST00000419442 SENP3-EIF4A1A0A087X0R7 540 aa15.84■□□□□ 0.13
RAPGEF1-205ENST00000419442 EIF3AQ14152 1382 aaKnown RBP15.84■□□□□ 0.13
RAPGEF1-205ENST00000419442 SSH2Q76I76 1423 aa15.84■□□□□ 0.13
RAPGEF1-205ENST00000419442 PDE3BQ13370 1112 aa15.83■□□□□ 0.12
RAPGEF1-205ENST00000419442 ITSN1Q15811 1721 aa15.82■□□□□ 0.12
RAPGEF1-205ENST00000419442 C1QTNF8P60827 252 aa15.82■□□□□ 0.12
RAPGEF1-205ENST00000419442 SAFB2Q14151 953 aaKnown RBP eCLIP15.82■□□□□ 0.12
RAPGEF1-205ENST00000419442 ADGRB1O14514 1584 aa15.81■□□□□ 0.12
RAPGEF1-205ENST00000419442 ATP7BP35670 1465 aa15.81■□□□□ 0.12
RAPGEF1-205ENST00000419442 CHRNA2Q15822 529 aa15.81■□□□□ 0.12
RAPGEF1-205ENST00000419442 CFAP70Q5T0N1 1121 aa15.81■□□□□ 0.12
RAPGEF1-205ENST00000419442 STRN4Q9NRL3 753 aa15.81■□□□□ 0.12
RAPGEF1-205ENST00000419442 C11orf95C9JLR9 678 aaPredicted RBP15.8■□□□□ 0.12
RAPGEF1-205ENST00000419442 PLSCR1O15162 318 aa15.79■□□□□ 0.12
RAPGEF1-205ENST00000419442 ANO8Q9HCE9 1232 aaPredicted RBP15.79■□□□□ 0.12
RAPGEF1-205ENST00000419442 PTGER2P43116 358 aa15.78■□□□□ 0.12
RAPGEF1-205ENST00000419442 TCP11L2Q8N4U5 519 aa15.78■□□□□ 0.12
RAPGEF1-205ENST00000419442 POGKQ9P215 609 aa15.78■□□□□ 0.12
RAPGEF1-205ENST00000419442 USP35Q9P2H5 1018 aa15.77■□□□□ 0.12
RAPGEF1-205ENST00000419442 THRAP3Q9Y2W1 955 aaKnown RBP15.77■□□□□ 0.12
RAPGEF1-205ENST00000419442 OVOS2A0A0G2JMS6 1433 aa15.77■□□□□ 0.11
RAPGEF1-205ENST00000419442 OVOS2A0A0J9YW53 1432 aa15.77■□□□□ 0.11
RAPGEF1-205ENST00000419442 OVOS2Q6IE36 1432 aa15.77■□□□□ 0.11
RAPGEF1-205ENST00000419442 LRRC37A3O60309 1634 aa15.76■□□□□ 0.11
RAPGEF1-205ENST00000419442 PAK3O75914 559 aaPredicted RBP15.76■□□□□ 0.11
RAPGEF1-205ENST00000419442 LARP1Q6PKG0 1096 aaKnown RBP15.76■□□□□ 0.11
RAPGEF1-205ENST00000419442 NGDNQ8NEJ9 315 aaKnown RBP15.76■□□□□ 0.11
RAPGEF1-205ENST00000419442 CPDO75976 1380 aa15.75■□□□□ 0.11
RAPGEF1-205ENST00000419442 WASLO00401 505 aaPredicted RBP15.75■□□□□ 0.11
RAPGEF1-205ENST00000419442 ZC3H6P61129 1189 aaKnown RBP15.75■□□□□ 0.11
RAPGEF1-205ENST00000419442 PDGFDQ9GZP0 370 aaPredicted RBP15.75■□□□□ 0.11
RAPGEF1-205ENST00000419442 TOPAZ1Q8N9V7 1692 aa15.74■□□□□ 0.11
RAPGEF1-205ENST00000419442 WNK3Q9BYP7 1800 aa15.74■□□□□ 0.11
RAPGEF1-205ENST00000419442 EVA1CP58658 441 aa15.74■□□□□ 0.11
RAPGEF1-205ENST00000419442 HIRIP3Q9BW71 556 aaPredicted RBP15.74■□□□□ 0.11
RAPGEF1-205ENST00000419442 MINK1Q8N4C8 1332 aaPredicted RBP15.73■□□□□ 0.11
RAPGEF1-205ENST00000419442 SYT17Q9BSW7 474 aa15.73■□□□□ 0.11
RAPGEF1-205ENST00000419442 COL5A2P05997 1499 aaPredicted RBP15.72■□□□□ 0.11
RAPGEF1-205ENST00000419442 ZBTB7AO95365 584 aa15.72■□□□□ 0.11
RAPGEF1-205ENST00000419442 SGIP1Q9BQI5 828 aa15.72■□□□□ 0.11
RAPGEF1-205ENST00000419442 BCL9O00512 1426 aa15.71■□□□□ 0.11
RAPGEF1-205ENST00000419442 PROM2Q8N271 834 aa15.71■□□□□ 0.11
RAPGEF1-205ENST00000419442 MPHOSPH9Q99550 1183 aa15.71■□□□□ 0.11
RAPGEF1-205ENST00000419442 FHDC1Q9C0D6 1143 aaPredicted RBP15.71■□□□□ 0.11
RAPGEF1-205ENST00000419442 POLR3AO14802 1390 aaPredicted RBP15.71■□□□□ 0.11
RAPGEF1-205ENST00000419442 USP19O94966 1318 aa15.7■□□□□ 0.1
RAPGEF1-205ENST00000419442 AKAP12Q02952 1782 aa15.7■□□□□ 0.1
RAPGEF1-205ENST00000419442 BCL11BQ9C0K0 894 aaPredicted RBP15.7■□□□□ 0.1
RAPGEF1-205ENST00000419442 ARHGEF28Q8N1W1 1705 aaKnown RBP15.7■□□□□ 0.1
RAPGEF1-205ENST00000419442 MAP3K5Q99683 1374 aa15.7■□□□□ 0.1
RAPGEF1-205ENST00000419442 CRB1P82279 1406 aa15.69■□□□□ 0.1
RAPGEF1-205ENST00000419442 PPARGC1BQ86YN6 1023 aaKnown RBP15.69■□□□□ 0.1
RAPGEF1-205ENST00000419442 TRAK1Q9UPV9 953 aa15.69■□□□□ 0.1
RAPGEF1-205ENST00000419442 PTF1AQ7RTS3 328 aa15.68■□□□□ 0.1
RAPGEF1-205ENST00000419442 ATF5Q9Y2D1 282 aaPredicted RBP15.68■□□□□ 0.1
RAPGEF1-205ENST00000419442 AATKQ6ZMQ8 1374 aa15.67■□□□□ 0.1
RAPGEF1-205ENST00000419442 NUTM2GQ5VZR2 741 aa15.67■□□□□ 0.1
RAPGEF1-205ENST00000419442 NUDT16Q96DE0 195 aaKnown RBP15.67■□□□□ 0.1
RAPGEF1-205ENST00000419442 MTFR1LQ9H019 292 aa15.67■□□□□ 0.1
RAPGEF1-205ENST00000419442 SHANK3Q9BYB0 1731 aa15.65■□□□□ 0.1
RAPGEF1-205ENST00000419442 COL18A1P39060 1754 aa15.65■□□□□ 0.1
RAPGEF1-205ENST00000419442 SLC15A2Q16348 729 aa15.65■□□□□ 0.1
RAPGEF1-205ENST00000419442 COL24A1Q17RW2 1714 aa15.65■□□□□ 0.1
RAPGEF1-205ENST00000419442 PAPPAQ13219 1627 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms