RNA–Protein interactions for RNA: ENST00000409219.5

CHRNA1-203, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-203ENST00000409219 YY1P25490 414 aa19.33■□□□□ 0.68
CHRNA1-203ENST00000409219 DLC1Q96QB1 1528 aa19.33■□□□□ 0.68
CHRNA1-203ENST00000409219 PRAM1Q96QH2 718 aa19.32■□□□□ 0.68
CHRNA1-203ENST00000409219 C14orf93Q9H972 538 aaKnown RBP19.32■□□□□ 0.68
CHRNA1-203ENST00000409219 DHX57Q6P158 1386 aaKnown RBP19.31■□□□□ 0.68
CHRNA1-203ENST00000409219 TRIM37O94972 964 aa19.3■□□□□ 0.68
CHRNA1-203ENST00000409219 PARD3Q8TEW0 1356 aa19.3■□□□□ 0.68
CHRNA1-203ENST00000409219 GPRASP1Q5JY77 1395 aa19.29■□□□□ 0.68
CHRNA1-203ENST00000409219 CFAP70Q5T0N1 1121 aa19.28■□□□□ 0.68
CHRNA1-203ENST00000409219 PHRF1Q9P1Y6 1649 aaKnown RBP19.28■□□□□ 0.68
CHRNA1-203ENST00000409219 SPATA31A1Q5TZJ5 1347 aa19.28■□□□□ 0.68
CHRNA1-203ENST00000409219 ACIN1Q9UKV3 1341 aaKnown RBP19.28■□□□□ 0.68
CHRNA1-203ENST00000409219 TULP4Q9NRJ4 1543 aa19.27■□□□□ 0.68
CHRNA1-203ENST00000409219 PRR36Q9H6K5 1346 aa19.27■□□□□ 0.68
CHRNA1-203ENST00000409219 FAM196AQ6ZSG2 479 aa19.27■□□□□ 0.67
CHRNA1-203ENST00000409219 PRDM11Q9NQV5 511 aa19.27■□□□□ 0.67
CHRNA1-203ENST00000409219 ADGRB1O14514 1584 aa19.25■□□□□ 0.67
CHRNA1-203ENST00000409219 APBA3O96018 575 aa19.25■□□□□ 0.67
CHRNA1-203ENST00000409219 KIAA0232Q92628 1395 aa19.24■□□□□ 0.67
CHRNA1-203ENST00000409219 HIRIP3Q9BW71 556 aaPredicted RBP19.23■□□□□ 0.67
CHRNA1-203ENST00000409219 POGKQ9P215 609 aa19.23■□□□□ 0.67
CHRNA1-203ENST00000409219 MPHOSPH9Q99550 1183 aa19.22■□□□□ 0.67
CHRNA1-203ENST00000409219 EIF3AQ14152 1382 aaKnown RBP19.22■□□□□ 0.67
CHRNA1-203ENST00000409219 CAMTA1Q9Y6Y1 1673 aa19.21■□□□□ 0.67
CHRNA1-203ENST00000409219 CHRNA2Q15822 529 aa19.21■□□□□ 0.67
CHRNA1-203ENST00000409219 ITSN1Q15811 1721 aa19.21■□□□□ 0.67
CHRNA1-203ENST00000409219 STRN4Q9NRL3 753 aa19.2■□□□□ 0.66
CHRNA1-203ENST00000409219 PAK3O75914 559 aaPredicted RBP19.19■□□□□ 0.66
CHRNA1-203ENST00000409219 MINK1Q8N4C8 1332 aaPredicted RBP19.19■□□□□ 0.66
CHRNA1-203ENST00000409219 NINLQ9Y2I6 1382 aa19.19■□□□□ 0.66
CHRNA1-203ENST00000409219 UTRNP46939 3433 aa19.18■□□□□ 0.66
CHRNA1-203ENST00000409219 NGDNQ8NEJ9 315 aaKnown RBP19.18■□□□□ 0.66
CHRNA1-203ENST00000409219 SSH2Q76I76 1423 aa19.18■□□□□ 0.66
CHRNA1-203ENST00000409219 ATP7BP35670 1465 aa19.18■□□□□ 0.66
CHRNA1-203ENST00000409219 NRKQ7Z2Y5 1582 aa19.17■□□□□ 0.66
CHRNA1-203ENST00000409219 NBPF8Q3BBV2 869 aa19.17■□□□□ 0.66
CHRNA1-203ENST00000409219 NBPF14Q5TI25 921 aa19.17■□□□□ 0.66
CHRNA1-203ENST00000409219 SPON1Q9HCB6 807 aa19.17■□□□□ 0.66
CHRNA1-203ENST00000409219 USP35Q9P2H5 1018 aa19.17■□□□□ 0.66
CHRNA1-203ENST00000409219 BARGINQ6ZT62 677 aa19.16■□□□□ 0.66
CHRNA1-203ENST00000409219 PPP1R1BQ9UD71 204 aaPredicted RBP19.16■□□□□ 0.66
CHRNA1-203ENST00000409219 TRAK1Q9UPV9 953 aa19.16■□□□□ 0.66
CHRNA1-203ENST00000409219 LMO7Q8WWI1 1683 aa19.16■□□□□ 0.66
CHRNA1-203ENST00000409219 WASLO00401 505 aaPredicted RBP19.16■□□□□ 0.66
CHRNA1-203ENST00000409219 PARP4Q9UKK3 1724 aaKnown RBP19.15■□□□□ 0.66
CHRNA1-203ENST00000409219 RGPD3A6NKT7 1758 aaPredicted RBP19.15■□□□□ 0.66
CHRNA1-203ENST00000409219 RGPD4Q7Z3J3 1758 aa19.15■□□□□ 0.66
CHRNA1-203ENST00000409219 KCNQ2O43526 872 aa19.15■□□□□ 0.66
CHRNA1-203ENST00000409219 ZC3H6P61129 1189 aaKnown RBP19.15■□□□□ 0.66
CHRNA1-203ENST00000409219 PDE3BQ13370 1112 aa19.15■□□□□ 0.66
CHRNA1-203ENST00000409219 CASZ1Q86V15 1759 aa19.14■□□□□ 0.65
CHRNA1-203ENST00000409219 ARHGEF28Q8N1W1 1705 aaKnown RBP19.13■□□□□ 0.65
CHRNA1-203ENST00000409219 PEAK1Q9H792 1746 aa19.12■□□□□ 0.65
CHRNA1-203ENST00000409219 TOPAZ1Q8N9V7 1692 aa19.12■□□□□ 0.65
CHRNA1-203ENST00000409219 DCAF8L1A6NGE4 600 aa19.1■□□□□ 0.65
CHRNA1-203ENST00000409219 NUTM2GQ5VZR2 741 aa19.1■□□□□ 0.65
CHRNA1-203ENST00000409219 LARP1Q6PKG0 1096 aaKnown RBP19.1■□□□□ 0.65
CHRNA1-203ENST00000409219 SBF2Q86WG5 1849 aa19.1■□□□□ 0.65
CHRNA1-203ENST00000409219 TCP11L2Q8N4U5 519 aa19.09■□□□□ 0.65
CHRNA1-203ENST00000409219 MYOM1P52179 1685 aa19.09■□□□□ 0.65
CHRNA1-203ENST00000409219 EVA1CP58658 441 aa19.09■□□□□ 0.65
CHRNA1-203ENST00000409219 LRRC37A3O60309 1634 aa19.08■□□□□ 0.64
CHRNA1-203ENST00000409219 NUDT16Q96DE0 195 aaKnown RBP19.07■□□□□ 0.64
CHRNA1-203ENST00000409219 ANO8Q9HCE9 1232 aaPredicted RBP19.07■□□□□ 0.64
CHRNA1-203ENST00000409219 POLR3AO14802 1390 aaPredicted RBP19.07■□□□□ 0.64
CHRNA1-203ENST00000409219 CPDO75976 1380 aa19.07■□□□□ 0.64
CHRNA1-203ENST00000409219 OVOS2A0A0G2JMS6 1433 aa19.06■□□□□ 0.64
CHRNA1-203ENST00000409219 OVOS2A0A0J9YW53 1432 aa19.06■□□□□ 0.64
CHRNA1-203ENST00000409219 OVOS2Q6IE36 1432 aa19.06■□□□□ 0.64
CHRNA1-203ENST00000409219 COL5A2P05997 1499 aaPredicted RBP19.06■□□□□ 0.64
CHRNA1-203ENST00000409219 THRAP3Q9Y2W1 955 aaKnown RBP19.05■□□□□ 0.64
CHRNA1-203ENST00000409219 USP19O94966 1318 aa19.05■□□□□ 0.64
CHRNA1-203ENST00000409219 ZNF784Q8NCA9 323 aaPredicted RBP19.03■□□□□ 0.64
CHRNA1-203ENST00000409219 PDGFDQ9GZP0 370 aaPredicted RBP19.03■□□□□ 0.64
CHRNA1-203ENST00000409219 ACEP12821 1306 aa19.02■□□□□ 0.64
CHRNA1-203ENST00000409219 WNK3Q9BYP7 1800 aa19.02■□□□□ 0.64
CHRNA1-203ENST00000409219 C11orf95C9JLR9 678 aaPredicted RBP19.02■□□□□ 0.63
CHRNA1-203ENST00000409219 CRB1P82279 1406 aa19.01■□□□□ 0.63
CHRNA1-203ENST00000409219 PLSCR1O15162 318 aa19.01■□□□□ 0.63
CHRNA1-203ENST00000409219 PTGER2P43116 358 aa18.99■□□□□ 0.63
CHRNA1-203ENST00000409219 ABTB2Q8N961 1025 aa18.99■□□□□ 0.63
CHRNA1-203ENST00000409219 CHD4Q14839 1912 aa18.99■□□□□ 0.63
CHRNA1-203ENST00000409219 PTF1AQ7RTS3 328 aa18.98■□□□□ 0.63
CHRNA1-203ENST00000409219 CDK19Q9BWU1 502 aa18.98■□□□□ 0.63
CHRNA1-203ENST00000409219 AKAP12Q02952 1782 aa18.98■□□□□ 0.63
CHRNA1-203ENST00000409219 ZBTB7AO95365 584 aa18.97■□□□□ 0.63
CHRNA1-203ENST00000409219 KDM2AQ9Y2K7 1162 aa18.97■□□□□ 0.63
CHRNA1-203ENST00000409219 DCAF11Q8TEB1 546 aa18.97■□□□□ 0.63
CHRNA1-203ENST00000409219 SENP3-EIF4A1A0A087X0R7 540 aa18.96■□□□□ 0.63
CHRNA1-203ENST00000409219 PLEKHG3A1L390 1219 aa18.96■□□□□ 0.63
CHRNA1-203ENST00000409219 GCP02774 474 aa18.96■□□□□ 0.63
CHRNA1-203ENST00000409219 CCDC61Q9Y6R9 512 aa18.96■□□□□ 0.63
CHRNA1-203ENST00000409219 PROM2Q8N271 834 aa18.95■□□□□ 0.62
CHRNA1-203ENST00000409219 BCL11BQ9C0K0 894 aaPredicted RBP18.95■□□□□ 0.62
CHRNA1-203ENST00000409219 DDB1Q16531 1140 aa18.94■□□□□ 0.62
CHRNA1-203ENST00000409219 NLRP13Q86W25 1043 aa18.94■□□□□ 0.62
CHRNA1-203ENST00000409219 SLIT3O75094 1523 aa18.93■□□□□ 0.62
CHRNA1-203ENST00000409219 COL18A1P39060 1754 aa18.93■□□□□ 0.62
CHRNA1-203ENST00000409219 ATF5Q9Y2D1 282 aaPredicted RBP18.93■□□□□ 0.62
CHRNA1-203ENST00000409219 BCL9O00512 1426 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms