RNA–Protein interactions for RNA: ENST00000390884.1

RNU6-258P-201, Transcript of RNA, U6 small nuclear 258, pseudogene, humanhuman

BASIC

Gene RNU6-258P, Length 101 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-258P-201ENST00000390884 GNB5O14775 395 aa0.75□□□□□ -2.29
RNU6-258P-201ENST00000390884 AKAP8O43823 692 aaKnown RBP0.75□□□□□ -2.29
RNU6-258P-201ENST00000390884 TLL1O43897 1013 aa0.75□□□□□ -2.29
RNU6-258P-201ENST00000390884 FARP2O94887 1054 aaPredicted RBP0.75□□□□□ -2.29
RNU6-258P-201ENST00000390884 ALDH1A1P00352 501 aa0.75□□□□□ -2.29
RNU6-258P-201ENST00000390884 ZXDCQ2QGD7 858 aaPredicted RBP0.75□□□□□ -2.29
RNU6-258P-201ENST00000390884 RNF19BQ6ZMZ0 732 aa0.75□□□□□ -2.29
RNU6-258P-201ENST00000390884 SIAH1Q8IUQ4 282 aa0.75□□□□□ -2.29
RNU6-258P-201ENST00000390884 FOXD4L1Q9NU39 408 aa0.75□□□□□ -2.29
RNU6-258P-201ENST00000390884 PCDHB3Q9Y5E6 796 aa0.75□□□□□ -2.29
RNU6-258P-201ENST00000390884 WASF2Q9Y6W5 498 aa0.75□□□□□ -2.29
RNU6-258P-201ENST00000390884 KIF3CO14782 793 aa0.74□□□□□ -2.29
RNU6-258P-201ENST00000390884 APBA3O96018 575 aa0.74□□□□□ -2.29
RNU6-258P-201ENST00000390884 AMPD1P23109 780 aa0.74□□□□□ -2.29
RNU6-258P-201ENST00000390884 SLC4A3P48751 1232 aa0.74□□□□□ -2.29
RNU6-258P-201ENST00000390884 FOSBP53539 338 aa0.74□□□□□ -2.29
RNU6-258P-201ENST00000390884 PRRT2Q7Z6L0 340 aaPredicted RBP0.74□□□□□ -2.29
RNU6-258P-201ENST00000390884 PLCD3Q8N3E9 789 aa0.74□□□□□ -2.29
RNU6-258P-201ENST00000390884 TRIM52Q96A61 297 aa0.74□□□□□ -2.29
RNU6-258P-201ENST00000390884 TRERF1Q96PN7 1200 aa0.74□□□□□ -2.29
RNU6-258P-201ENST00000390884 SUV39H2Q9H5I1 410 aa0.74□□□□□ -2.29
RNU6-258P-201ENST00000390884 SLITRK6Q9H5Y7 841 aa0.74□□□□□ -2.29
RNU6-258P-201ENST00000390884 UPP2O95045 317 aa0.73□□□□□ -2.29
RNU6-258P-201ENST00000390884 ADRB1P08588 477 aa0.73□□□□□ -2.29
RNU6-258P-201ENST00000390884 INHBBP09529 407 aa0.73□□□□□ -2.29
RNU6-258P-201ENST00000390884 ZSCAN22P10073 491 aaPredicted RBP0.73□□□□□ -2.29
RNU6-258P-201ENST00000390884 SYN1P17600 705 aa0.73□□□□□ -2.29
RNU6-258P-201ENST00000390884 CD97P48960 835 aa0.73□□□□□ -2.29
RNU6-258P-201ENST00000390884 MPNDQ8N594 471 aa0.73□□□□□ -2.29
RNU6-258P-201ENST00000390884 TRIM41Q8WV44 630 aa0.73□□□□□ -2.29
RNU6-258P-201ENST00000390884 ADAM33Q9BZ11 813 aa0.73□□□□□ -2.29
RNU6-258P-201ENST00000390884 NSFL1CQ9UNZ2 370 aaKnown RBP0.73□□□□□ -2.29
RNU6-258P-201ENST00000390884 OIP5O43482 229 aa0.72□□□□□ -2.29
RNU6-258P-201ENST00000390884 ZNF800Q2TB10 664 aaPredicted RBP eCLIP0.72□□□□□ -2.29
RNU6-258P-201ENST00000390884 CRB2Q5IJ48 1285 aa0.72□□□□□ -2.29
RNU6-258P-201ENST00000390884 JPH4Q96JJ6 628 aa0.72□□□□□ -2.29
RNU6-258P-201ENST00000390884 MBIPQ9NS73 344 aa0.72□□□□□ -2.29
RNU6-258P-201ENST00000390884 IGF1RP08069 1367 aa0.71□□□□□ -2.3
RNU6-258P-201ENST00000390884 TRIM6-TRIM34B2RNG4 842 aa0.71□□□□□ -2.3
RNU6-258P-201ENST00000390884 FOXD2O60548 495 aaPredicted RBP0.71□□□□□ -2.3
RNU6-258P-201ENST00000390884 SPATA31C1P0DKV0 1188 aa0.71□□□□□ -2.3
RNU6-258P-201ENST00000390884 RAP1GAPP47736 663 aa0.71□□□□□ -2.3
RNU6-258P-201ENST00000390884 PTSQ03393 145 aa0.71□□□□□ -2.3
RNU6-258P-201ENST00000390884 PUM1Q14671 1186 aaKnown RBP eCLIP0.71□□□□□ -2.3
RNU6-258P-201ENST00000390884 C6orf118Q5T5N4 469 aa0.71□□□□□ -2.3
RNU6-258P-201ENST00000390884 CDCP2Q5VXM1 449 aa0.71□□□□□ -2.3
RNU6-258P-201ENST00000390884 ERICH6BQ5W0A0 696 aa0.71□□□□□ -2.3
RNU6-258P-201ENST00000390884 FOXR1Q6PIV2 292 aa0.71□□□□□ -2.3
RNU6-258P-201ENST00000390884 BLOC1S3Q6QNY0 202 aa0.71□□□□□ -2.3
RNU6-258P-201ENST00000390884 PACS2Q86VP3 889 aa0.71□□□□□ -2.3
RNU6-258P-201ENST00000390884 LRRC56Q8IYG6 542 aaPredicted RBP0.71□□□□□ -2.3
RNU6-258P-201ENST00000390884 CCDC155Q8N6L0 562 aa0.71□□□□□ -2.3
RNU6-258P-201ENST00000390884 EFCAB3Q8N7B9 438 aa0.71□□□□□ -2.3
RNU6-258P-201ENST00000390884 NACC1Q96RE7 527 aa0.71□□□□□ -2.3
RNU6-258P-201ENST00000390884 ADGRE2Q9UHX3 823 aa0.71□□□□□ -2.3
RNU6-258P-201ENST00000390884 TNFRSF18Q9Y5U5 241 aa0.71□□□□□ -2.3
RNU6-258P-201ENST00000390884 SPDYE4A6NLX3 237 aa0.7□□□□□ -2.3
RNU6-258P-201ENST00000390884 BMP2P12643 396 aa0.7□□□□□ -2.3
RNU6-258P-201ENST00000390884 JUNBP17275 347 aaPredicted RBP0.7□□□□□ -2.3
RNU6-258P-201ENST00000390884 ITGA6P23229 1130 aa0.7□□□□□ -2.3
RNU6-258P-201ENST00000390884 ECM1Q16610 540 aa0.7□□□□□ -2.3
RNU6-258P-201ENST00000390884 LCNL1Q6ZST4 164 aa0.7□□□□□ -2.3
RNU6-258P-201ENST00000390884 ACDQ96AP0 544 aa0.7□□□□□ -2.3
RNU6-258P-201ENST00000390884 FCF1Q9Y324 198 aaKnown RBP0.7□□□□□ -2.3
RNU6-258P-201ENST00000390884 SOX12O15370 315 aa0.69□□□□□ -2.3
RNU6-258P-201ENST00000390884 WNT11O96014 354 aa0.69□□□□□ -2.3
RNU6-258P-201ENST00000390884 ITGB6P18564 788 aa0.69□□□□□ -2.3
RNU6-258P-201ENST00000390884 GPR162Q16538 588 aa0.69□□□□□ -2.3
RNU6-258P-201ENST00000390884 SORCS2Q96PQ0 1159 aa0.69□□□□□ -2.3
RNU6-258P-201ENST00000390884 CDCA7Q9BWT1 371 aaPredicted RBP0.69□□□□□ -2.3
RNU6-258P-201ENST00000390884 SPDYE3A6NKU9 549 aa0.68□□□□□ -2.3
RNU6-258P-201ENST00000390884 GRIN3BO60391 1043 aa0.68□□□□□ -2.3
RNU6-258P-201ENST00000390884 INSRRP14616 1297 aa0.68□□□□□ -2.3
RNU6-258P-201ENST00000390884 CFPP27918 469 aa0.68□□□□□ -2.3
RNU6-258P-201ENST00000390884 INHBCP55103 352 aa0.68□□□□□ -2.3
RNU6-258P-201ENST00000390884 MAP3K9P80192 1104 aa0.68□□□□□ -2.3
RNU6-258P-201ENST00000390884 NOTCH2Q04721 2471 aa0.68□□□□□ -2.3
RNU6-258P-201ENST00000390884 PRRT3Q5FWE3 981 aa0.68□□□□□ -2.3
RNU6-258P-201ENST00000390884 LINC00114Q6XXX2 140 aa0.68□□□□□ -2.3
RNU6-258P-201ENST00000390884 SLF2Q8IX21 1173 aa0.68□□□□□ -2.3
RNU6-258P-201ENST00000390884 TP53INP1Q96A56 240 aa0.68□□□□□ -2.3
RNU6-258P-201ENST00000390884 MRIQ9BWK5 157 aa0.68□□□□□ -2.3
RNU6-258P-201ENST00000390884 NR1I2O75469 434 aa0.67□□□□□ -2.3
RNU6-258P-201ENST00000390884 FSHBP01225 129 aa0.67□□□□□ -2.3
RNU6-258P-201ENST00000390884 HOXA5P20719 270 aa0.67□□□□□ -2.3
RNU6-258P-201ENST00000390884 ZXDAP98168 799 aa0.67□□□□□ -2.3
RNU6-258P-201ENST00000390884 GIGYF2Q6Y7W6 1299 aaKnown RBP0.67□□□□□ -2.3
RNU6-258P-201ENST00000390884 DNAJC5GQ8N7S2 189 aa0.67□□□□□ -2.3
RNU6-258P-201ENST00000390884 SLC16A11Q8NCK7 471 aa0.67□□□□□ -2.3
RNU6-258P-201ENST00000390884 OXCT2Q9BYC2 517 aaPredicted RBP0.67□□□□□ -2.3
RNU6-258P-201ENST00000390884 DNMT3LQ9UJW3 386 aa0.67□□□□□ -2.3
RNU6-258P-201ENST00000390884 LILRB3O75022 631 aa0.66□□□□□ -2.3
RNU6-258P-201ENST00000390884 ERBB2P04626 1255 aa0.66□□□□□ -2.3
RNU6-258P-201ENST00000390884 GRIK1P39086 918 aa0.66□□□□□ -2.3
RNU6-258P-201ENST00000390884 NFKB2Q00653 900 aa0.66□□□□□ -2.3
RNU6-258P-201ENST00000390884 TRIM32Q13049 653 aa0.66□□□□□ -2.3
RNU6-258P-201ENST00000390884 CBLBQ13191 982 aa0.66□□□□□ -2.3
RNU6-258P-201ENST00000390884 GAS6Q14393 721 aa0.66□□□□□ -2.3
RNU6-258P-201ENST00000390884 RC3H1Q5TC82 1133 aaKnown RBP0.66□□□□□ -2.3
RNU6-258P-201ENST00000390884 LRCH2Q5VUJ6 765 aa0.66□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms