RNA–Protein interactions for RNA: ENST00000389138.7

ERCC4-202, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 2

Gene ERCC4, Length 2,106 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-202ENST00000389138 POTEB3A0JP26 581 aa7.99□□□□□ -1.13
ERCC4-202ENST00000389138 TCF3P15923 654 aa7.99□□□□□ -1.13
ERCC4-202ENST00000389138 POTEBQ6S5H4 581 aa7.99□□□□□ -1.13
ERCC4-202ENST00000389138 KCNK17Q96T54 332 aa7.99□□□□□ -1.13
ERCC4-202ENST00000389138 RBM27Q9P2N5 1060 aaKnown RBP7.99□□□□□ -1.13
ERCC4-202ENST00000389138 KDM5BQ9UGL1 1544 aa7.98□□□□□ -1.13
ERCC4-202ENST00000389138 PKNOX2Q96KN3 472 aa7.98□□□□□ -1.13
ERCC4-202ENST00000389138 SLC4A5Q9BY07 1137 aa7.98□□□□□ -1.13
ERCC4-202ENST00000389138 CDHR5Q9HBB8 845 aa7.98□□□□□ -1.13
ERCC4-202ENST00000389138 MADDQ8WXG6 1647 aa7.98□□□□□ -1.13
ERCC4-202ENST00000389138 PLEKHD1A6NEE1 506 aa7.97□□□□□ -1.13
ERCC4-202ENST00000389138 SRPK2P78362 688 aaKnown RBP7.97□□□□□ -1.13
ERCC4-202ENST00000389138 TEX2Q8IWB9 1127 aa7.97□□□□□ -1.13
ERCC4-202ENST00000389138 CALR3Q96L12 384 aaKnown RBP7.97□□□□□ -1.13
ERCC4-202ENST00000389138 SLC52A1Q9NWF4 448 aa7.97□□□□□ -1.13
ERCC4-202ENST00000389138 MINK1Q8N4C8 1332 aaPredicted RBP7.97□□□□□ -1.13
ERCC4-202ENST00000389138 IRF6O14896 467 aa7.97□□□□□ -1.13
ERCC4-202ENST00000389138 PBXIP1Q96AQ6 731 aa7.97□□□□□ -1.13
ERCC4-202ENST00000389138 NPDC1Q9NQX5 325 aaPredicted RBP7.97□□□□□ -1.13
ERCC4-202ENST00000389138 PPP1R1BQ9UD71 204 aaPredicted RBP7.97□□□□□ -1.13
ERCC4-202ENST00000389138 PPME1Q9Y570 386 aa7.97□□□□□ -1.13
ERCC4-202ENST00000389138 TNIKQ9UKE5 1360 aa7.97□□□□□ -1.13
ERCC4-202ENST00000389138 GNPATO15228 680 aa7.96□□□□□ -1.13
ERCC4-202ENST00000389138 ZNF16P17020 682 aaPredicted RBP7.96□□□□□ -1.13
ERCC4-202ENST00000389138 NOM1Q5C9Z4 860 aaKnown RBP7.96□□□□□ -1.13
ERCC4-202ENST00000389138 MAGI3Q5TCQ9 1506 aa7.96□□□□□ -1.14
ERCC4-202ENST00000389138 POM121CA8CG34 1229 aa7.96□□□□□ -1.14
ERCC4-202ENST00000389138 RIMS1Q86UR5 1692 aaKnown RBP7.96□□□□□ -1.14
ERCC4-202ENST00000389138 SNRKQ9NRH2 765 aa7.96□□□□□ -1.14
ERCC4-202ENST00000389138 SUGT1Q9Y2Z0 365 aa7.96□□□□□ -1.14
ERCC4-202ENST00000389138 UACAQ9BZF9 1416 aa7.95□□□□□ -1.14
ERCC4-202ENST00000389138 COL9A1P20849 921 aa7.95□□□□□ -1.14
ERCC4-202ENST00000389138 PRSS12P56730 875 aa7.95□□□□□ -1.14
ERCC4-202ENST00000389138 GLMNQ92990 594 aa7.95□□□□□ -1.14
ERCC4-202ENST00000389138 C8orf37Q96NL8 207 aa7.95□□□□□ -1.14
ERCC4-202ENST00000389138 REPIN1Q9BWE0 567 aaKnown RBP7.95□□□□□ -1.14
ERCC4-202ENST00000389138 TK2O00142 265 aa7.94□□□□□ -1.14
ERCC4-202ENST00000389138 PSEN2P49810 448 aa7.94□□□□□ -1.14
ERCC4-202ENST00000389138 POTEEQ6S8J3 1075 aa7.94□□□□□ -1.14
ERCC4-202ENST00000389138 DNAJC14Q6Y2X3 702 aaPredicted RBP7.94□□□□□ -1.14
ERCC4-202ENST00000389138 PROCA1Q8NCQ7 364 aaPredicted RBP7.94□□□□□ -1.14
ERCC4-202ENST00000389138 PRDM10Q9NQV6 1147 aa7.94□□□□□ -1.14
ERCC4-202ENST00000389138 WDR7Q9Y4E6 1490 aa7.94□□□□□ -1.14
ERCC4-202ENST00000389138 CARMIL2Q6F5E8 1435 aa7.94□□□□□ -1.14
ERCC4-202ENST00000389138 RFX1P22670 979 aa7.94□□□□□ -1.14
ERCC4-202ENST00000389138 MAP2K5Q13163 448 aa7.94□□□□□ -1.14
ERCC4-202ENST00000389138 EXOC8Q8IYI6 725 aa7.94□□□□□ -1.14
ERCC4-202ENST00000389138 MICAL1Q8TDZ2 1067 aa7.94□□□□□ -1.14
ERCC4-202ENST00000389138 IQGAP2Q13576 1575 aa7.94□□□□□ -1.14
ERCC4-202ENST00000389138 SPDYE5A6NIY4 337 aa7.93□□□□□ -1.14
ERCC4-202ENST00000389138 SH3D19Q5HYK7 790 aa7.93□□□□□ -1.14
ERCC4-202ENST00000389138 ZBED2Q9BTP6 218 aa7.93□□□□□ -1.14
ERCC4-202ENST00000389138 RAB11FIP3O75154 756 aa7.93□□□□□ -1.14
ERCC4-202ENST00000389138 TTLL12Q14166 644 aaPredicted RBP7.93□□□□□ -1.14
ERCC4-202ENST00000389138 TTC13Q8NBP0 860 aa7.93□□□□□ -1.14
ERCC4-202ENST00000389138 UBXN4Q92575 508 aa7.93□□□□□ -1.14
ERCC4-202ENST00000389138 CDCA7LQ96GN5 454 aa7.93□□□□□ -1.14
ERCC4-202ENST00000389138 PCGF6Q9BYE7 350 aa7.93□□□□□ -1.14
ERCC4-202ENST00000389138 TRIM6-TRIM34B2RNG4 842 aa7.92□□□□□ -1.14
ERCC4-202ENST00000389138 LSM11P83369 360 aaKnown RBP eCLIP7.92□□□□□ -1.14
ERCC4-202ENST00000389138 GIGYF2Q6Y7W6 1299 aaKnown RBP7.92□□□□□ -1.14
ERCC4-202ENST00000389138 AXIN2Q9Y2T1 843 aa7.92□□□□□ -1.14
ERCC4-202ENST00000389138 DMRTA1Q5VZB9 504 aa7.91□□□□□ -1.14
ERCC4-202ENST00000389138 PACS2Q86VP3 889 aa7.91□□□□□ -1.14
ERCC4-202ENST00000389138 ARAP3Q8WWN8 1544 aa7.91□□□□□ -1.14
ERCC4-202ENST00000389138 DISP1Q96F81 1524 aa7.91□□□□□ -1.14
ERCC4-202ENST00000389138 CSB-PGBD3P0DP91 1061 aa7.91□□□□□ -1.14
ERCC4-202ENST00000389138 CDAN1Q8IWY9 1227 aa7.91□□□□□ -1.14
ERCC4-202ENST00000389138 GDPD2Q9HCC8 539 aa7.91□□□□□ -1.14
ERCC4-202ENST00000389138 CD109Q6YHK3 1445 aa7.9□□□□□ -1.14
ERCC4-202ENST00000389138 FECHP22830 423 aa7.9□□□□□ -1.14
ERCC4-202ENST00000389138 PADI6Q6TGC4 694 aa7.9□□□□□ -1.14
ERCC4-202ENST00000389138 TMEM88BA6NKF7 163 aa7.9□□□□□ -1.15
ERCC4-202ENST00000389138 MYH16Q9H6N6 1097 aa7.9□□□□□ -1.15
ERCC4-202ENST00000389138 VPS9D1Q9Y2B5 631 aa7.9□□□□□ -1.15
ERCC4-202ENST00000389138 ZNF326Q5BKZ1 582 aaKnown RBP7.89□□□□□ -1.15
ERCC4-202ENST00000389138 CFAP70Q5T0N1 1121 aa7.89□□□□□ -1.15
ERCC4-202ENST00000389138 VRTNQ9H8Y1 702 aa7.89□□□□□ -1.15
ERCC4-202ENST00000389138 RABGEF1Q9UJ41 708 aa7.89□□□□□ -1.15
ERCC4-202ENST00000389138 KIAA0556O60303 1618 aa7.89□□□□□ -1.15
ERCC4-202ENST00000389138 NBPF26B4DH59 902 aa7.88□□□□□ -1.15
ERCC4-202ENST00000389138 TPD52L2O43399 206 aaKnown RBP7.88□□□□□ -1.15
ERCC4-202ENST00000389138 FBXO31Q5XUX0 539 aaPredicted RBP7.88□□□□□ -1.15
ERCC4-202ENST00000389138 FRMPD1Q5SYB0 1578 aa7.88□□□□□ -1.15
ERCC4-202ENST00000389138 OATP04181 439 aa7.88□□□□□ -1.15
ERCC4-202ENST00000389138 GNEQ9Y223 722 aaKnown RBP7.88□□□□□ -1.15
ERCC4-202ENST00000389138 STRCQ7RTU9 1775 aa7.87□□□□□ -1.15
ERCC4-202ENST00000389138 PREX1Q8TCU6 1659 aa7.87□□□□□ -1.15
ERCC4-202ENST00000389138 ZC3H6P61129 1189 aaKnown RBP7.87□□□□□ -1.15
ERCC4-202ENST00000389138 PROX2Q3B8N5 592 aa7.87□□□□□ -1.15
ERCC4-202ENST00000389138 ADGRD1Q6QNK2 874 aa7.87□□□□□ -1.15
ERCC4-202ENST00000389138 GPATCH3Q96I76 525 aa7.87□□□□□ -1.15
ERCC4-202ENST00000389138 KRTAP3-3Q9BYR6 98 aa7.87□□□□□ -1.15
ERCC4-202ENST00000389138 KRTAP3-2Q9BYR7 98 aa7.87□□□□□ -1.15
ERCC4-202ENST00000389138 TSKSQ9UJT2 592 aa7.87□□□□□ -1.15
ERCC4-202ENST00000389138 CENPBP07199 599 aaPredicted RBP7.87□□□□□ -1.15
ERCC4-202ENST00000389138 NAALADL2Q58DX5 795 aa7.87□□□□□ -1.15
ERCC4-202ENST00000389138 CDCA7Q9BWT1 371 aaPredicted RBP7.87□□□□□ -1.15
ERCC4-202ENST00000389138 NBPF3Q9H094 633 aa7.87□□□□□ -1.15
ERCC4-202ENST00000389138 KIAA1468Q9P260 1216 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms