RNA–Protein interactions for RNA: ENST00000357867.8

FN1-205, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-205ENST00000357867 SLC26A8Q96RN1 970 aa13.3□□□□□ -0.28
FN1-205ENST00000357867 ANKRD30BQ9BXX2 1392 aa13.3□□□□□ -0.28
FN1-205ENST00000357867 IPO7O95373 1038 aaKnown RBP13.3□□□□□ -0.28
FN1-205ENST00000357867 HIP1O00291 1037 aa13.3□□□□□ -0.28
FN1-205ENST00000357867 EPS15P42566 896 aa13.3□□□□□ -0.28
FN1-205ENST00000357867 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.3□□□□□ -0.28
FN1-205ENST00000357867 AKNAQ7Z591 1439 aa13.3□□□□□ -0.28
FN1-205ENST00000357867 ZPR1O75312 459 aa13.29□□□□□ -0.28
FN1-205ENST00000357867 TMEM132AQ24JP5 1023 aa13.29□□□□□ -0.28
FN1-205ENST00000357867 ARHGEF11O15085 1522 aa13.29□□□□□ -0.28
FN1-205ENST00000357867 INTS3Q68E01 1043 aaKnown RBP13.29□□□□□ -0.28
FN1-205ENST00000357867 BIVM-ERCC5R4GMW8 1640 aa13.29□□□□□ -0.28
FN1-205ENST00000357867 GRIN2AQ12879 1464 aa13.29□□□□□ -0.28
FN1-205ENST00000357867 CLASRPQ8N2M8 674 aaKnown RBP13.29□□□□□ -0.28
FN1-205ENST00000357867 PCF11O94913 1555 aaKnown RBP13.29□□□□□ -0.28
FN1-205ENST00000357867 BECN2A8MW95 431 aa13.29□□□□□ -0.28
FN1-205ENST00000357867 ODF2Q5BJF6 829 aa13.29□□□□□ -0.28
FN1-205ENST00000357867 AAMPQ13685 434 aa13.28□□□□□ -0.28
FN1-205ENST00000357867 CCDC158Q5M9N0 1113 aa13.28□□□□□ -0.28
FN1-205ENST00000357867 GZF1Q9H116 711 aaPredicted RBP13.28□□□□□ -0.28
FN1-205ENST00000357867 RAPGEF6Q8TEU7 1601 aa13.28□□□□□ -0.28
FN1-205ENST00000357867 GNAI3P08754 354 aa13.28□□□□□ -0.28
FN1-205ENST00000357867 ABCA10Q8WWZ4 1543 aa13.28□□□□□ -0.28
FN1-205ENST00000357867 KIAA1107Q9UPP5 1409 aa13.28□□□□□ -0.28
FN1-205ENST00000357867 ZBED9Q6R2W3 1325 aa13.28□□□□□ -0.28
FN1-205ENST00000357867 NGLY1Q96IV0 654 aa13.27□□□□□ -0.28
FN1-205ENST00000357867 CCDC57Q2TAC2 916 aa13.27□□□□□ -0.28
FN1-205ENST00000357867 TTC39AQ5SRH9 613 aa13.27□□□□□ -0.28
FN1-205ENST00000357867 CDK13Q14004 1512 aaKnown RBP13.27□□□□□ -0.28
FN1-205ENST00000357867 ATAD2Q6PL18 1390 aa13.27□□□□□ -0.28
FN1-205ENST00000357867 DDX11L8A8MPP1 907 aa13.27□□□□□ -0.28
FN1-205ENST00000357867 PSMA5P28066 241 aa13.27□□□□□ -0.29
FN1-205ENST00000357867 CFAP70Q5T0N1 1121 aa13.27□□□□□ -0.29
FN1-205ENST00000357867 ZNF530Q6P9A1 599 aaPredicted RBP13.26□□□□□ -0.29
FN1-205ENST00000357867 PRKRIP1Q9H875 184 aaPredicted RBP13.26□□□□□ -0.29
FN1-205ENST00000357867 FOXD4L1Q9NU39 408 aa13.25□□□□□ -0.29
FN1-205ENST00000357867 CCDC7Q96M83 1385 aa13.25□□□□□ -0.29
FN1-205ENST00000357867 BTBD11A6QL63 1104 aa13.25□□□□□ -0.29
FN1-205ENST00000357867 ATP2B2Q01814 1243 aa13.25□□□□□ -0.29
FN1-205ENST00000357867 COG6Q9Y2V7 657 aa13.25□□□□□ -0.29
FN1-205ENST00000357867 FOXD4L5Q5VV16 416 aaPredicted RBP13.25□□□□□ -0.29
FN1-205ENST00000357867 FOXD4L4Q8WXT5 416 aaPredicted RBP13.25□□□□□ -0.29
FN1-205ENST00000357867 CT47A1Q5JQC4 288 aaPredicted RBP13.24□□□□□ -0.29
FN1-205ENST00000357867 CAMSAP2Q08AD1 1489 aa13.24□□□□□ -0.29
FN1-205ENST00000357867 HDGFL1Q5TGJ6 251 aa13.23□□□□□ -0.29
FN1-205ENST00000357867 TMOD2Q9NZR1 351 aa13.23□□□□□ -0.29
FN1-205ENST00000357867 RRP1P56182 461 aaKnown RBP13.23□□□□□ -0.29
FN1-205ENST00000357867 CABP1Q9NZU7 370 aa13.23□□□□□ -0.29
FN1-205ENST00000357867 DENND4BO75064 1496 aaPredicted RBP13.23□□□□□ -0.29
FN1-205ENST00000357867 PLB1Q6P1J6 1458 aa13.23□□□□□ -0.29
FN1-205ENST00000357867 ZSCAN25Q6NSZ9 544 aa13.23□□□□□ -0.29
FN1-205ENST00000357867 PPP6R1Q9UPN7 881 aa13.23□□□□□ -0.29
FN1-205ENST00000357867 MYL6BP14649 208 aa13.23□□□□□ -0.29
FN1-205ENST00000357867 FANCAO15360 1455 aa13.23□□□□□ -0.29
FN1-205ENST00000357867 SLC4A3P48751 1232 aa13.23□□□□□ -0.29
FN1-205ENST00000357867 SULT6B1Q6IMI4 303 aa13.23□□□□□ -0.29
FN1-205ENST00000357867 NACAP1Q9BZK3 213 aa13.23□□□□□ -0.29
FN1-205ENST00000357867 ADAMTS2O95450 1211 aa13.22□□□□□ -0.29
FN1-205ENST00000357867 GNAI2P04899 355 aa13.22□□□□□ -0.29
FN1-205ENST00000357867 FAM161AQ3B820 660 aa13.22□□□□□ -0.29
FN1-205ENST00000357867 TMOD3Q9NYL9 352 aa13.22□□□□□ -0.29
FN1-205ENST00000357867 MSH6P52701 1360 aa13.22□□□□□ -0.29
FN1-205ENST00000357867 CDK5RAP3Q96JB5 506 aa13.22□□□□□ -0.29
FN1-205ENST00000357867 MTMR7Q9Y216 660 aa13.22□□□□□ -0.29
FN1-205ENST00000357867 TXLNAP40222 546 aa13.21□□□□□ -0.29
FN1-205ENST00000357867 CCDC61Q9Y6R9 512 aa13.21□□□□□ -0.29
FN1-205ENST00000357867 TOM1O60784 492 aa13.21□□□□□ -0.29
FN1-205ENST00000357867 PRKAR2BP31323 418 aa13.21□□□□□ -0.29
FN1-205ENST00000357867 SMC3Q9UQE7 1217 aa13.21□□□□□ -0.29
FN1-205ENST00000357867 IGHMBP2P38935 993 aaKnown RBP13.21□□□□□ -0.3
FN1-205ENST00000357867 ZSCAN29Q8IWY8 852 aaPredicted RBP13.21□□□□□ -0.3
FN1-205ENST00000357867 FSD1Q9BTV5 496 aa13.21□□□□□ -0.3
FN1-205ENST00000357867 CCT4P50991 539 aaKnown RBP13.2□□□□□ -0.3
FN1-205ENST00000357867 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.2□□□□□ -0.3
FN1-205ENST00000357867 CFAP74Q9C0B2 1584 aa13.2□□□□□ -0.3
FN1-205ENST00000357867 SKOR2Q2VWA4 1001 aaPredicted RBP13.2□□□□□ -0.3
FN1-205ENST00000357867 CRBNQ96SW2 442 aa13.2□□□□□ -0.3
FN1-205ENST00000357867 BRD4O60885 1362 aaPredicted RBP13.2□□□□□ -0.3
FN1-205ENST00000357867 RDXP35241 583 aaKnown RBP13.2□□□□□ -0.3
FN1-205ENST00000357867 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.19□□□□□ -0.3
FN1-205ENST00000357867 KIF1BO60333 1816 aa13.19□□□□□ -0.3
FN1-205ENST00000357867 GOLGA6L3A6NEY3 463 aa13.19□□□□□ -0.3
FN1-205ENST00000357867 XPCQ01831 940 aaPredicted RBP13.19□□□□□ -0.3
FN1-205ENST00000357867 BICD2Q8TD16 824 aa13.19□□□□□ -0.3
FN1-205ENST00000357867 ZNF287Q9HBT7 754 aa13.19□□□□□ -0.3
FN1-205ENST00000357867 ZC3H6P61129 1189 aaKnown RBP13.19□□□□□ -0.3
FN1-205ENST00000357867 CADPS2Q86UW7 1296 aa13.19□□□□□ -0.3
FN1-205ENST00000357867 SURF6O75683 361 aaKnown RBP13.19□□□□□ -0.3
FN1-205ENST00000357867 ARAP1Q96P48 1450 aa13.18□□□□□ -0.3
FN1-205ENST00000357867 FOXD4L6Q3SYB3 417 aaPredicted RBP13.18□□□□□ -0.3
FN1-205ENST00000357867 FOXD4L3Q6VB84 417 aaPredicted RBP13.18□□□□□ -0.3
FN1-205ENST00000357867 RRP12Q5JTH9 1297 aaKnown RBP13.18□□□□□ -0.3
FN1-205ENST00000357867 NUDT16Q96DE0 195 aaKnown RBP13.18□□□□□ -0.3
FN1-205ENST00000357867 GNAT3A8MTJ3 354 aa13.18□□□□□ -0.3
FN1-205ENST00000357867 DNAJC2Q99543 621 aaKnown RBP13.18□□□□□ -0.3
FN1-205ENST00000357867 MYO5CQ9NQX4 1742 aa13.18□□□□□ -0.3
FN1-205ENST00000357867 MPHOSPH10O00566 681 aaKnown RBP13.17□□□□□ -0.3
FN1-205ENST00000357867 AMOTQ4VCS5 1084 aa13.17□□□□□ -0.3
FN1-205ENST00000357867 EIF4G3O43432 1585 aaKnown RBP13.17□□□□□ -0.3
FN1-205ENST00000357867 TRIM21P19474 475 aaKnown RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms