RNA–Protein interactions for RNA: ENST00000356005.8

FN1-204, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,846 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-204ENST00000356005 WASHC4Q2M389 1173 aa13.64□□□□□ -0.23
FN1-204ENST00000356005 CNTROBQ8N137 903 aa13.64□□□□□ -0.23
FN1-204ENST00000356005 GGNBP2Q9H3C7 697 aa13.64□□□□□ -0.23
FN1-204ENST00000356005 CLASRPQ8N2M8 674 aaKnown RBP13.64□□□□□ -0.23
FN1-204ENST00000356005 MPHOSPH8Q99549 860 aa13.64□□□□□ -0.23
FN1-204ENST00000356005 INTS3Q68E01 1043 aaKnown RBP13.64□□□□□ -0.23
FN1-204ENST00000356005 DENND4BO75064 1496 aaPredicted RBP13.64□□□□□ -0.23
FN1-204ENST00000356005 PBRM1Q86U86 1689 aa13.63□□□□□ -0.23
FN1-204ENST00000356005 NOL8Q76FK4 1167 aaKnown RBP13.63□□□□□ -0.23
FN1-204ENST00000356005 BCL2L13Q9BXK5 485 aa13.63□□□□□ -0.23
FN1-204ENST00000356005 PSMA5P28066 241 aa13.63□□□□□ -0.23
FN1-204ENST00000356005 CCDC158Q5M9N0 1113 aa13.63□□□□□ -0.23
FN1-204ENST00000356005 TSPOAP1O95153 1857 aa13.62□□□□□ -0.23
FN1-204ENST00000356005 ZPR1O75312 459 aa13.62□□□□□ -0.23
FN1-204ENST00000356005 SAMD1Q6SPF0 538 aaPredicted RBP13.62□□□□□ -0.23
FN1-204ENST00000356005 DDX11L8A8MPP1 907 aa13.62□□□□□ -0.23
FN1-204ENST00000356005 ARHGEF11O15085 1522 aa13.62□□□□□ -0.23
FN1-204ENST00000356005 RAPGEF6Q8TEU7 1601 aa13.62□□□□□ -0.23
FN1-204ENST00000356005 FYB1O15117 783 aa13.62□□□□□ -0.23
FN1-204ENST00000356005 SLC26A8Q96RN1 970 aa13.61□□□□□ -0.23
FN1-204ENST00000356005 PRKRIP1Q9H875 184 aaPredicted RBP13.61□□□□□ -0.23
FN1-204ENST00000356005 BECN2A8MW95 431 aa13.61□□□□□ -0.23
FN1-204ENST00000356005 CCDC57Q2TAC2 916 aa13.61□□□□□ -0.23
FN1-204ENST00000356005 ZSCAN25Q6NSZ9 544 aa13.61□□□□□ -0.23
FN1-204ENST00000356005 CFAP70Q5T0N1 1121 aa13.6□□□□□ -0.23
FN1-204ENST00000356005 EPS15P42566 896 aa13.6□□□□□ -0.23
FN1-204ENST00000356005 ZNF530Q6P9A1 599 aaPredicted RBP13.6□□□□□ -0.23
FN1-204ENST00000356005 NGLY1Q96IV0 654 aa13.6□□□□□ -0.23
FN1-204ENST00000356005 CCDC61Q9Y6R9 512 aa13.6□□□□□ -0.23
FN1-204ENST00000356005 PCF11O94913 1555 aaKnown RBP13.6□□□□□ -0.23
FN1-204ENST00000356005 TOM1O60784 492 aa13.6□□□□□ -0.23
FN1-204ENST00000356005 FANCAO15360 1455 aa13.59□□□□□ -0.23
FN1-204ENST00000356005 PCMTD1Q96MG8 357 aaPredicted RBP13.59□□□□□ -0.23
FN1-204ENST00000356005 TMOD2Q9NZR1 351 aa13.59□□□□□ -0.23
FN1-204ENST00000356005 PEG3Q9GZU2 1588 aa13.59□□□□□ -0.23
FN1-204ENST00000356005 ODF2Q5BJF6 829 aa13.59□□□□□ -0.23
FN1-204ENST00000356005 TTC39AQ5SRH9 613 aa13.59□□□□□ -0.23
FN1-204ENST00000356005 MSH6P52701 1360 aa13.59□□□□□ -0.23
FN1-204ENST00000356005 CADPS2Q86UW7 1296 aa13.59□□□□□ -0.23
FN1-204ENST00000356005 BRD4O60885 1362 aaPredicted RBP13.59□□□□□ -0.23
FN1-204ENST00000356005 RBM5P52756 815 aaKnown RBP eCLIP13.59□□□□□ -0.231e-19■■□□□ 13
FN1-204ENST00000356005 CAMSAP2Q08AD1 1489 aa13.58□□□□□ -0.23
FN1-204ENST00000356005 NACAP1Q9BZK3 213 aa13.58□□□□□ -0.23
FN1-204ENST00000356005 SLKQ9H2G2 1235 aaPredicted RBP13.58□□□□□ -0.23
FN1-204ENST00000356005 CDK13Q14004 1512 aaKnown RBP13.58□□□□□ -0.23
FN1-204ENST00000356005 TMEM132AQ24JP5 1023 aa13.58□□□□□ -0.24
FN1-204ENST00000356005 FAM177BA6PVY3 158 aa13.57□□□□□ -0.24
FN1-204ENST00000356005 CCT4P50991 539 aaKnown RBP13.57□□□□□ -0.24
FN1-204ENST00000356005 SKOR2Q2VWA4 1001 aaPredicted RBP13.57□□□□□ -0.24
FN1-204ENST00000356005 HDGFL1Q5TGJ6 251 aa13.57□□□□□ -0.24
FN1-204ENST00000356005 BTBD11A6QL63 1104 aa13.57□□□□□ -0.24
FN1-204ENST00000356005 ZNF287Q9HBT7 754 aa13.57□□□□□ -0.24
FN1-204ENST00000356005 GNAI2P04899 355 aa13.56□□□□□ -0.24
FN1-204ENST00000356005 RRP1P56182 461 aaKnown RBP13.56□□□□□ -0.24
FN1-204ENST00000356005 CFAP74Q9C0B2 1584 aa13.56□□□□□ -0.24
FN1-204ENST00000356005 FAM161AQ3B820 660 aa13.56□□□□□ -0.24
FN1-204ENST00000356005 CABP1Q9NZU7 370 aa13.56□□□□□ -0.24
FN1-204ENST00000356005 TXLNAP40222 546 aa13.56□□□□□ -0.24
FN1-204ENST00000356005 RDXP35241 583 aaKnown RBP13.56□□□□□ -0.24
FN1-204ENST00000356005 AMOTQ4VCS5 1084 aa13.56□□□□□ -0.24
FN1-204ENST00000356005 TMOD3Q9NYL9 352 aa13.56□□□□□ -0.24
FN1-204ENST00000356005 PRXQ9BXM0 1461 aa13.56□□□□□ -0.24
FN1-204ENST00000356005 CT47B1P0C2W7 299 aaPredicted RBP13.55□□□□□ -0.24
FN1-204ENST00000356005 IGHMBP2P38935 993 aaKnown RBP13.55□□□□□ -0.24
FN1-204ENST00000356005 PDE4CQ08493 712 aa13.55□□□□□ -0.24
FN1-204ENST00000356005 SULT6B1Q6IMI4 303 aa13.55□□□□□ -0.24
FN1-204ENST00000356005 COG6Q9Y2V7 657 aa13.55□□□□□ -0.24
FN1-204ENST00000356005 ARAP1Q96P48 1450 aa13.54□□□□□ -0.24
FN1-204ENST00000356005 CT47A1Q5JQC4 288 aaPredicted RBP13.54□□□□□ -0.24
FN1-204ENST00000356005 PRKAR2BP31323 418 aa13.54□□□□□ -0.24
FN1-204ENST00000356005 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.54□□□□□ -0.24
FN1-204ENST00000356005 CDK5RAP3Q96JB5 506 aa13.53□□□□□ -0.24
FN1-204ENST00000356005 SMC3Q9UQE7 1217 aa13.53□□□□□ -0.24
FN1-204ENST00000356005 HSP90AB3PQ58FF7 597 aa13.53□□□□□ -0.24
FN1-204ENST00000356005 TRIM21P19474 475 aaKnown RBP13.53□□□□□ -0.24
FN1-204ENST00000356005 NUDT16Q96DE0 195 aaKnown RBP13.53□□□□□ -0.24
FN1-204ENST00000356005 FSD1Q9BTV5 496 aa13.53□□□□□ -0.24
FN1-204ENST00000356005 GNAT3A8MTJ3 354 aa13.52□□□□□ -0.25
FN1-204ENST00000356005 ATP2B2Q01814 1243 aa13.52□□□□□ -0.25
FN1-204ENST00000356005 THOC2Q8NI27 1593 aaKnown RBP13.52□□□□□ -0.25
FN1-204ENST00000356005 DNAI2Q9GZS0 605 aa13.51□□□□□ -0.25
FN1-204ENST00000356005 SURF6O75683 361 aaKnown RBP13.51□□□□□ -0.25
FN1-204ENST00000356005 SLF2Q8IX21 1173 aa13.51□□□□□ -0.25
FN1-204ENST00000356005 GZF1Q9H116 711 aaPredicted RBP13.51□□□□□ -0.25
FN1-204ENST00000356005 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.51□□□□□ -0.25
FN1-204ENST00000356005 GOLGA6L3A6NEY3 463 aa13.5□□□□□ -0.25
FN1-204ENST00000356005 ADAMTS2O95450 1211 aa13.5□□□□□ -0.25
FN1-204ENST00000356005 MYL6BP14649 208 aa13.5□□□□□ -0.25
FN1-204ENST00000356005 ZSCAN29Q8IWY8 852 aaPredicted RBP13.5□□□□□ -0.25
FN1-204ENST00000356005 PDCP20941 246 aa13.5□□□□□ -0.25
FN1-204ENST00000356005 NAT10Q9H0A0 1025 aaKnown RBP13.5□□□□□ -0.25
FN1-204ENST00000356005 EIF4G3O43432 1585 aaKnown RBP13.5□□□□□ -0.25
FN1-204ENST00000356005 TWISTNBQ3B726 338 aaPredicted RBP13.5□□□□□ -0.25
FN1-204ENST00000356005 EXOC5O00471 708 aa13.49□□□□□ -0.25
FN1-204ENST00000356005 BICD2Q8TD16 824 aa13.49□□□□□ -0.25
FN1-204ENST00000356005 RPGRQ92834 1020 aaKnown RBP13.49□□□□□ -0.25
FN1-204ENST00000356005 CRBNQ96SW2 442 aa13.49□□□□□ -0.25
FN1-204ENST00000356005 ZNF428Q96B54 188 aa13.49□□□□□ -0.25
FN1-204ENST00000356005 SRCIN1Q9C0H9 1055 aa13.49□□□□□ -0.25
FN1-204ENST00000356005 ZC3H6P61129 1189 aaKnown RBP13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms