RNA–Protein interactions for RNA: ENST00000348513.10

SMARCE1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCE1, Length 5,840 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-202ENST00000348513 PHF23Q9BUL5 403 aaPredicted RBP13.3□□□□□ -0.28
SMARCE1-202ENST00000348513 LRRC9Q6ZRR7 1453 aa13.3□□□□□ -0.28
SMARCE1-202ENST00000348513 GNAI1P63096 354 aa13.3□□□□□ -0.28
SMARCE1-202ENST00000348513 MRVI1Q9Y6F6 885 aa13.3□□□□□ -0.28
SMARCE1-202ENST00000348513 RRP12Q5JTH9 1297 aaKnown RBP13.3□□□□□ -0.28
SMARCE1-202ENST00000348513 CTDP1Q9Y5B0 961 aaPredicted RBP13.3□□□□□ -0.28
SMARCE1-202ENST00000348513 MTHFSP49914 203 aa13.29□□□□□ -0.28
SMARCE1-202ENST00000348513 CCDC91Q7Z6B0 441 aa13.29□□□□□ -0.28
SMARCE1-202ENST00000348513 TXNDC2Q86VQ3 553 aa13.29□□□□□ -0.28
SMARCE1-202ENST00000348513 GOLIM4O00461 696 aa13.29□□□□□ -0.28
SMARCE1-202ENST00000348513 MPHOSPH10O00566 681 aaKnown RBP13.29□□□□□ -0.28
SMARCE1-202ENST00000348513 ZKSCAN1P17029 563 aaPredicted RBP13.29□□□□□ -0.28
SMARCE1-202ENST00000348513 NFXL1Q6ZNB6 911 aa13.29□□□□□ -0.28
SMARCE1-202ENST00000348513 LRRFIP1Q32MZ4 808 aaKnown RBP13.28□□□□□ -0.28
SMARCE1-202ENST00000348513 STRN4Q9NRL3 753 aa13.28□□□□□ -0.28
SMARCE1-202ENST00000348513 PRG4Q92954 1404 aaPredicted RBP13.28□□□□□ -0.28
SMARCE1-202ENST00000348513 KDM4AO75164 1064 aa13.28□□□□□ -0.28
SMARCE1-202ENST00000348513 MIA2Q96PC5 1412 aa13.28□□□□□ -0.28
SMARCE1-202ENST00000348513 CPLX1O14810 134 aa13.28□□□□□ -0.28
SMARCE1-202ENST00000348513 TRIM29Q14134 588 aa13.28□□□□□ -0.28
SMARCE1-202ENST00000348513 PRAM1Q96QH2 718 aa13.28□□□□□ -0.28
SMARCE1-202ENST00000348513 TCEAL9Q9UHQ7 104 aa13.28□□□□□ -0.28
SMARCE1-202ENST00000348513 ADAMTS8Q9UP79 889 aa13.28□□□□□ -0.28
SMARCE1-202ENST00000348513 REC8O95072 547 aa13.27□□□□□ -0.28
SMARCE1-202ENST00000348513 RBM33Q96EV2 1170 aaKnown RBP13.27□□□□□ -0.28
SMARCE1-202ENST00000348513 ZFP91Q96JP5 570 aaPredicted RBP13.27□□□□□ -0.29
SMARCE1-202ENST00000348513 NESP48681 1621 aa13.27□□□□□ -0.29
SMARCE1-202ENST00000348513 KIAA0754O94854 1291 aa13.26□□□□□ -0.29
SMARCE1-202ENST00000348513 LIG1P18858 919 aa13.26□□□□□ -0.29
SMARCE1-202ENST00000348513 CCDC27Q2M243 656 aa13.26□□□□□ -0.29
SMARCE1-202ENST00000348513 CEP89Q96ST8 783 aa13.26□□□□□ -0.29
SMARCE1-202ENST00000348513 MTMR7Q9Y216 660 aa13.26□□□□□ -0.29
SMARCE1-202ENST00000348513 PROSER2Q86WR7 435 aaPredicted RBP13.26□□□□□ -0.29
SMARCE1-202ENST00000348513 DDX11Q96FC9 970 aa13.26□□□□□ -0.29
SMARCE1-202ENST00000348513 CCDC70Q6NSX1 233 aa13.26□□□□□ -0.29
SMARCE1-202ENST00000348513 ROCK1Q13464 1354 aa13.26□□□□□ -0.29
SMARCE1-202ENST00000348513 TMCO5BA8MYB1 307 aa13.26□□□□□ -0.29
SMARCE1-202ENST00000348513 GOLGA6L19H0YKK7 550 aa13.26□□□□□ -0.29
SMARCE1-202ENST00000348513 TRDNQ13061 729 aa13.26□□□□□ -0.29
SMARCE1-202ENST00000348513 WASHC4Q2M389 1173 aa13.26□□□□□ -0.29
SMARCE1-202ENST00000348513 SLC26A8Q96RN1 970 aa13.26□□□□□ -0.29
SMARCE1-202ENST00000348513 BECN2A8MW95 431 aa13.25□□□□□ -0.29
SMARCE1-202ENST00000348513 ERCC4Q92889 916 aaPredicted RBP13.25□□□□□ -0.29
SMARCE1-202ENST00000348513 RBM42Q9BTD8 480 aaKnown RBP13.25□□□□□ -0.29
SMARCE1-202ENST00000348513 SETSIPP0DME0 302 aa13.25□□□□□ -0.29
SMARCE1-202ENST00000348513 CPLX2Q6PUV4 134 aaKnown RBP13.25□□□□□ -0.29
SMARCE1-202ENST00000348513 TEX2Q8IWB9 1127 aa13.25□□□□□ -0.29
SMARCE1-202ENST00000348513 VPS37CA5D8V6 355 aaPredicted RBP13.24□□□□□ -0.29
SMARCE1-202ENST00000348513 UBTFL1P0CB47 393 aaPredicted RBP13.24□□□□□ -0.29
SMARCE1-202ENST00000348513 ARID4AP29374 1257 aaPredicted RBP13.24□□□□□ -0.29
SMARCE1-202ENST00000348513 RNF20Q5VTR2 975 aa13.24□□□□□ -0.29
SMARCE1-202ENST00000348513 ATP6V1DQ9Y5K8 247 aa13.24□□□□□ -0.29
SMARCE1-202ENST00000348513 FYCO1Q9BQS8 1478 aa13.24□□□□□ -0.29
SMARCE1-202ENST00000348513 GRIN2BQ13224 1484 aa13.24□□□□□ -0.29
SMARCE1-202ENST00000348513 CFTRP13569 1480 aa13.24□□□□□ -0.29
SMARCE1-202ENST00000348513 MYCBPQ99417 103 aaPredicted RBP13.24□□□□□ -0.29
SMARCE1-202ENST00000348513 CDCA7LQ96GN5 454 aa13.24□□□□□ -0.29
SMARCE1-202ENST00000348513 GPRASP1Q5JY77 1395 aa13.24□□□□□ -0.29
SMARCE1-202ENST00000348513 CASKIN1Q8WXD9 1431 aa13.24□□□□□ -0.29
SMARCE1-202ENST00000348513 PRKAR2BP31323 418 aa13.23□□□□□ -0.29
SMARCE1-202ENST00000348513 WASHC2AQ641Q2 1341 aa13.23□□□□□ -0.29
SMARCE1-202ENST00000348513 CNTLNQ9NXG0 1405 aa13.23□□□□□ -0.29
SMARCE1-202ENST00000348513 SPDYE4A6NLX3 237 aa13.23□□□□□ -0.29
SMARCE1-202ENST00000348513 NUTM2BA6NNL0 878 aaPredicted RBP13.23□□□□□ -0.29
SMARCE1-202ENST00000348513 NUTM2EB1AL46 878 aaPredicted RBP13.23□□□□□ -0.29
SMARCE1-202ENST00000348513 NUTM2AQ8IVF1 878 aaPredicted RBP13.23□□□□□ -0.29
SMARCE1-202ENST00000348513 TCP11L2Q8N4U5 519 aa13.23□□□□□ -0.29
SMARCE1-202ENST00000348513 PCMTD1Q96MG8 357 aaPredicted RBP13.23□□□□□ -0.29
SMARCE1-202ENST00000348513 C1orf115Q9H7X2 142 aa13.23□□□□□ -0.29
SMARCE1-202ENST00000348513 ERICH2A1L162 156 aa13.22□□□□□ -0.29
SMARCE1-202ENST00000348513 DCTN1Q14203 1278 aa13.22□□□□□ -0.29
SMARCE1-202ENST00000348513 CAVIN1Q6NZI2 390 aaKnown RBP13.22□□□□□ -0.29
SMARCE1-202ENST00000348513 FAM107BQ9H098 131 aa13.22□□□□□ -0.29
SMARCE1-202ENST00000348513 SYNJ2O15056 1496 aa13.22□□□□□ -0.29
SMARCE1-202ENST00000348513 TTLL5Q6EMB2 1281 aa13.22□□□□□ -0.29
SMARCE1-202ENST00000348513 CCDC112Q8NEF3 446 aa13.22□□□□□ -0.29
SMARCE1-202ENST00000348513 HOMER1Q86YM7 354 aa13.22□□□□□ -0.29
SMARCE1-202ENST00000348513 BICD2Q8TD16 824 aa13.22□□□□□ -0.29
SMARCE1-202ENST00000348513 TSR1Q2NL82 804 aaKnown RBP13.22□□□□□ -0.29
SMARCE1-202ENST00000348513 INTS3Q68E01 1043 aaKnown RBP13.22□□□□□ -0.29
SMARCE1-202ENST00000348513 TXLNBQ8N3L3 684 aa13.21□□□□□ -0.29
SMARCE1-202ENST00000348513 SLC12A5Q9H2X9 1139 aa13.21□□□□□ -0.29
SMARCE1-202ENST00000348513 ERC2O15083 957 aa13.21□□□□□ -0.3
SMARCE1-202ENST00000348513 RAPGEF3O95398 923 aa13.21□□□□□ -0.3
SMARCE1-202ENST00000348513 PPP2R1AP30153 589 aa13.21□□□□□ -0.3
SMARCE1-202ENST00000348513 NF2P35240 595 aa13.21□□□□□ -0.3
SMARCE1-202ENST00000348513 CDK19Q9BWU1 502 aa13.21□□□□□ -0.3
SMARCE1-202ENST00000348513 RRBP1Q9P2E9 1410 aaKnown RBP13.2□□□□□ -0.3
SMARCE1-202ENST00000348513 GTF2F1P35269 517 aaKnown RBP eCLIP13.2□□□□□ -0.3
SMARCE1-202ENST00000348513 SCAPERQ9BY12 1400 aa13.2□□□□□ -0.3
SMARCE1-202ENST00000348513 CHMP4CQ96CF2 233 aa13.2□□□□□ -0.3
SMARCE1-202ENST00000348513 RUFY1Q96T51 708 aa13.2□□□□□ -0.3
SMARCE1-202ENST00000348513 SUDS3Q9H7L9 328 aaPredicted RBP13.2□□□□□ -0.3
SMARCE1-202ENST00000348513 RASSF4Q9H2L5 321 aa13.2□□□□□ -0.3
SMARCE1-202ENST00000348513 CPSF2Q9P2I0 782 aaKnown RBP13.2□□□□□ -0.3
SMARCE1-202ENST00000348513 TSR2Q969E8 191 aaKnown RBP13.2□□□□□ -0.3
SMARCE1-202ENST00000348513 CABP1Q9NZU7 370 aa13.2□□□□□ -0.3
SMARCE1-202ENST00000348513 FBXO3Q9UK99 471 aa13.2□□□□□ -0.3
SMARCE1-202ENST00000348513 SMC3Q9UQE7 1217 aa13.2□□□□□ -0.3
SMARCE1-202ENST00000348513 EXOSC9Q06265 439 aaKnown RBP13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 654.8 ms