RNA–Protein interactions for RNA: ENST00000336714.7

SEC23B-202, Transcript of Sec23 homolog B, coat complex II component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC23B, Length 3,411 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23B-202ENST00000336714 NINLQ9Y2I6 1382 aa13.55□□□□□ -0.24
SEC23B-202ENST00000336714 RUNDC1Q96C34 613 aa13.55□□□□□ -0.24
SEC23B-202ENST00000336714 MCM5P33992 734 aa13.54□□□□□ -0.24
SEC23B-202ENST00000336714 HMGN5P82970 282 aaKnown RBP13.54□□□□□ -0.24
SEC23B-202ENST00000336714 CHAF1AQ13111 956 aaPredicted RBP13.54□□□□□ -0.24
SEC23B-202ENST00000336714 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.53□□□□□ -0.24
SEC23B-202ENST00000336714 NUCB1Q02818 461 aa13.53□□□□□ -0.24
SEC23B-202ENST00000336714 ZFP91Q96JP5 570 aaPredicted RBP13.53□□□□□ -0.24
SEC23B-202ENST00000336714 FANCD2Q9BXW9 1451 aa13.53□□□□□ -0.24
SEC23B-202ENST00000336714 DNMT1P26358 1616 aaKnown RBP13.53□□□□□ -0.24
SEC23B-202ENST00000336714 ADCY5O95622 1261 aa13.53□□□□□ -0.24
SEC23B-202ENST00000336714 ATF7IPQ6VMQ6 1270 aa13.53□□□□□ -0.24
SEC23B-202ENST00000336714 CARD14Q9BXL6 1004 aa13.53□□□□□ -0.24
SEC23B-202ENST00000336714 HCLS1P14317 486 aaPredicted RBP13.52□□□□□ -0.24
SEC23B-202ENST00000336714 NPHP1O15259 732 aa13.52□□□□□ -0.25
SEC23B-202ENST00000336714 MTHFSP49914 203 aa13.52□□□□□ -0.25
SEC23B-202ENST00000336714 HDAC1Q13547 482 aaPredicted RBP13.52□□□□□ -0.25
SEC23B-202ENST00000336714 PRIMPOLQ96LW4 560 aa13.52□□□□□ -0.25
SEC23B-202ENST00000336714 SMARCA5O60264 1052 aaPredicted RBP13.51□□□□□ -0.25
SEC23B-202ENST00000336714 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.51□□□□□ -0.25
SEC23B-202ENST00000336714 ZDHHC9Q9Y397 364 aa13.51□□□□□ -0.25
SEC23B-202ENST00000336714 V9GYY5 206 aaPredicted RBP13.51□□□□□ -0.25
SEC23B-202ENST00000336714 PDS5BQ9NTI5 1447 aa13.51□□□□□ -0.25
SEC23B-202ENST00000336714 GADD45BO75293 160 aaPredicted RBP13.51□□□□□ -0.25
SEC23B-202ENST00000336714 IRX5P78411 483 aaPredicted RBP13.51□□□□□ -0.25
SEC23B-202ENST00000336714 PIBF1Q8WXW3 757 aa13.51□□□□□ -0.25
SEC23B-202ENST00000336714 ZNF592Q92610 1267 aa13.51□□□□□ -0.25
SEC23B-202ENST00000336714 IBTKQ9P2D0 1353 aaPredicted RBP13.51□□□□□ -0.25
SEC23B-202ENST00000336714 C16orf71Q8IYS4 520 aaPredicted RBP13.51□□□□□ -0.25
SEC23B-202ENST00000336714 BMP2KLQ5H9B9 411 aa13.5□□□□□ -0.25
SEC23B-202ENST00000336714 FAM135AQ9P2D6 1515 aa13.5□□□□□ -0.25
SEC23B-202ENST00000336714 CDCA8Q53HL2 280 aa13.5□□□□□ -0.25
SEC23B-202ENST00000336714 WDR7Q9Y4E6 1490 aa13.5□□□□□ -0.25
SEC23B-202ENST00000336714 PYCARDQ9ULZ3 195 aa13.49□□□□□ -0.25
SEC23B-202ENST00000336714 ABCA10Q8WWZ4 1543 aa13.49□□□□□ -0.25
SEC23B-202ENST00000336714 CHMP3Q9Y3E7 222 aa13.49□□□□□ -0.25
SEC23B-202ENST00000336714 SAMD9Q5K651 1589 aa13.49□□□□□ -0.25
SEC23B-202ENST00000336714 C16orf45Q96MC5 204 aaPredicted RBP13.49□□□□□ -0.25
SEC23B-202ENST00000336714 ARHGEF12Q9NZN5 1544 aa13.49□□□□□ -0.25
SEC23B-202ENST00000336714 CDC45O75419 566 aa13.48□□□□□ -0.25
SEC23B-202ENST00000336714 ZBTB40Q9NUA8 1239 aa13.48□□□□□ -0.25
SEC23B-202ENST00000336714 RABEP1Q15276 862 aa13.48□□□□□ -0.25
SEC23B-202ENST00000336714 GPRASP1Q5JY77 1395 aa13.47□□□□□ -0.25
SEC23B-202ENST00000336714 ST18O60284 1047 aa13.47□□□□□ -0.25
SEC23B-202ENST00000336714 NEK4P51957 841 aa13.47□□□□□ -0.25
SEC23B-202ENST00000336714 OTUD7AQ8TE49 926 aaPredicted RBP13.47□□□□□ -0.25
SEC23B-202ENST00000336714 A2MP01023 1474 aa13.47□□□□□ -0.25
SEC23B-202ENST00000336714 ATAD2Q6PL18 1390 aa13.46□□□□□ -0.25
SEC23B-202ENST00000336714 TRIM6-TRIM34B2RNG4 842 aa13.46□□□□□ -0.25
SEC23B-202ENST00000336714 TRIM34Q9BYJ4 488 aa13.46□□□□□ -0.25
SEC23B-202ENST00000336714 ST7Q9NRC1 585 aa13.46□□□□□ -0.25
SEC23B-202ENST00000336714 PIK3C2GO75747 1445 aa13.46□□□□□ -0.25
SEC23B-202ENST00000336714 C9orf84Q5VXU9 1444 aa13.46□□□□□ -0.25
SEC23B-202ENST00000336714 TAF7LQ5H9L4 462 aa13.46□□□□□ -0.26
SEC23B-202ENST00000336714 GAPVD1Q14C86 1478 aa13.45□□□□□ -0.26
SEC23B-202ENST00000336714 FBLN2P98095 1184 aa13.45□□□□□ -0.26
SEC23B-202ENST00000336714 LARP6Q9BRS8 491 aaKnown RBP13.45□□□□□ -0.26
SEC23B-202ENST00000336714 SLC12A5Q9H2X9 1139 aa13.45□□□□□ -0.26
SEC23B-202ENST00000336714 ASXL1Q8IXJ9 1541 aa13.45□□□□□ -0.26
SEC23B-202ENST00000336714 GSPT1P15170 499 aaKnown RBP13.45□□□□□ -0.26
SEC23B-202ENST00000336714 WDR63Q8IWG1 891 aa13.45□□□□□ -0.26
SEC23B-202ENST00000336714 CCDC27Q2M243 656 aa13.45□□□□□ -0.26
SEC23B-202ENST00000336714 CHMP4CQ96CF2 233 aa13.45□□□□□ -0.26
SEC23B-202ENST00000336714 DIAPH3Q9NSV4 1193 aa13.45□□□□□ -0.26
SEC23B-202ENST00000336714 TOPBP1Q92547 1522 aa13.45□□□□□ -0.26
SEC23B-202ENST00000336714 LAMC3Q9Y6N6 1575 aa13.44□□□□□ -0.26
SEC23B-202ENST00000336714 DRC7Q8IY82 874 aa13.44□□□□□ -0.26
SEC23B-202ENST00000336714 FKBP5Q13451 457 aaPredicted RBP13.44□□□□□ -0.26
SEC23B-202ENST00000336714 IFT57Q9NWB7 429 aa13.44□□□□□ -0.26
SEC23B-202ENST00000336714 MBD3O95983 291 aa13.44□□□□□ -0.26
SEC23B-202ENST00000336714 CYP2E1P05181 493 aaPredicted RBP13.44□□□□□ -0.26
SEC23B-202ENST00000336714 ZMYM3Q14202 1370 aa13.43□□□□□ -0.26
SEC23B-202ENST00000336714 GIMAP6Q6P9H5 292 aa13.43□□□□□ -0.26
SEC23B-202ENST00000336714 CLEC17AQ6ZS10 378 aa13.43□□□□□ -0.26
SEC23B-202ENST00000336714 SYAP1Q96A49 352 aaPredicted RBP13.43□□□□□ -0.26
SEC23B-202ENST00000336714 TMX1Q9H3N1 280 aa13.43□□□□□ -0.26
SEC23B-202ENST00000336714 KDM5DQ9BY66 1539 aa13.43□□□□□ -0.26
SEC23B-202ENST00000336714 CFAP53Q96M91 514 aa13.42□□□□□ -0.26
SEC23B-202ENST00000336714 UPF3BQ9BZI7 483 aaKnown RBP13.42□□□□□ -0.26
SEC23B-202ENST00000336714 CFAP70Q5T0N1 1121 aa13.42□□□□□ -0.26
SEC23B-202ENST00000336714 RTF1Q92541 710 aaKnown RBP13.42□□□□□ -0.26
SEC23B-202ENST00000336714 PLEKHD1A6NEE1 506 aa13.42□□□□□ -0.26
SEC23B-202ENST00000336714 NCBP1Q09161 790 aaKnown RBP13.42□□□□□ -0.26
SEC23B-202ENST00000336714 TSHZ3Q63HK5 1081 aa13.42□□□□□ -0.26
SEC23B-202ENST00000336714 THUMPD2Q9BTF0 503 aaKnown RBP13.42□□□□□ -0.26
SEC23B-202ENST00000336714 FIBPO43427 364 aa13.41□□□□□ -0.26
SEC23B-202ENST00000336714 SRPK2P78362 688 aaKnown RBP13.41□□□□□ -0.26
SEC23B-202ENST00000336714 USP48Q86UV5 1035 aa13.41□□□□□ -0.26
SEC23B-202ENST00000336714 CUL7Q14999 1698 aa13.41□□□□□ -0.26
SEC23B-202ENST00000336714 LRMPQ12912 555 aa13.41□□□□□ -0.26
SEC23B-202ENST00000336714 OGFRQ9NZT2 677 aa13.41□□□□□ -0.26
SEC23B-202ENST00000336714 GPATCH8Q9UKJ3 1502 aaKnown RBP13.41□□□□□ -0.26
SEC23B-202ENST00000336714 IPO8O15397 1037 aaKnown RBP13.41□□□□□ -0.26
SEC23B-202ENST00000336714 PTGS1P23219 599 aa13.41□□□□□ -0.26
SEC23B-202ENST00000336714 USP26Q9BXU7 913 aa13.41□□□□□ -0.26
SEC23B-202ENST00000336714 GTF2F1P35269 517 aaKnown RBP eCLIP13.4□□□□□ -0.26
SEC23B-202ENST00000336714 TAF3Q5VWG9 929 aa13.4□□□□□ -0.26
SEC23B-202ENST00000336714 TMX3Q96JJ7 454 aa13.4□□□□□ -0.26
SEC23B-202ENST00000336714 SAFB2Q14151 953 aaKnown RBP eCLIP13.4□□□□□ -0.26
SEC23B-202ENST00000336714 NGEFQ8N5V2 710 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 113.4 ms