RNA–Protein interactions for RNA: ENST00000262304.8

PKD1-201, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PKD1, Length 14,138 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-201ENST00000262304 MAGEC2Q9UBF1 373 aaPredicted RBP12.17□□□□□ -0.46
PKD1-201ENST00000262304 TRDNQ13061 729 aa12.17□□□□□ -0.46
PKD1-201ENST00000262304 ERLIN2O94905 339 aa12.16□□□□□ -0.46
PKD1-201ENST00000262304 RUFY2Q8WXA3 655 aa12.16□□□□□ -0.46
PKD1-201ENST00000262304 RBM33Q96EV2 1170 aaKnown RBP12.16□□□□□ -0.46
PKD1-201ENST00000262304 CCDC113Q9H0I3 377 aa12.16□□□□□ -0.46
PKD1-201ENST00000262304 AQRO60306 1485 aaKnown RBP eCLIP12.16□□□□□ -0.461e-6■■■■■ 34.8
PKD1-201ENST00000262304 MRE11P49959 708 aa12.16□□□□□ -0.46
PKD1-201ENST00000262304 ZKSCAN2Q63HK3 967 aa12.16□□□□□ -0.46
PKD1-201ENST00000262304 COG3Q96JB2 828 aa12.16□□□□□ -0.46
PKD1-201ENST00000262304 IKQ13123 557 aaPredicted RBP12.16□□□□□ -0.46
PKD1-201ENST00000262304 STK3Q13188 491 aa12.16□□□□□ -0.46
PKD1-201ENST00000262304 DNA2P51530 1060 aa12.16□□□□□ -0.46
PKD1-201ENST00000262304 CEP63Q96MT8 703 aa12.16□□□□□ -0.46
PKD1-201ENST00000262304 KINO60870 393 aaKnown RBP12.16□□□□□ -0.46
PKD1-201ENST00000262304 PSMD1Q99460 953 aa12.15□□□□□ -0.46
PKD1-201ENST00000262304 RUSC2Q8N2Y8 1516 aa12.15□□□□□ -0.46
PKD1-201ENST00000262304 WASHC4Q2M389 1173 aa12.15□□□□□ -0.46
PKD1-201ENST00000262304 MAP4K4O95819 1239 aaPredicted RBP12.15□□□□□ -0.46
PKD1-201ENST00000262304 SYTL4Q96C24 671 aaPredicted RBP12.15□□□□□ -0.46
PKD1-201ENST00000262304 EVC2Q86UK5 1308 aa12.15□□□□□ -0.46
PKD1-201ENST00000262304 SPDYE4A6NLX3 237 aa12.15□□□□□ -0.47
PKD1-201ENST00000262304 GOLGA4Q13439 2230 aaKnown RBP12.15□□□□□ -0.47
PKD1-201ENST00000262304 PANK3Q9H999 370 aa12.14□□□□□ -0.47
PKD1-201ENST00000262304 PIBF1Q8WXW3 757 aa12.14□□□□□ -0.47
PKD1-201ENST00000262304 HMGN5P82970 282 aaKnown RBP12.14□□□□□ -0.47
PKD1-201ENST00000262304 LRRCC1Q9C099 1032 aa12.14□□□□□ -0.47
PKD1-201ENST00000262304 ST20-MTHFSA0A0A6YYL1 179 aa12.14□□□□□ -0.47
PKD1-201ENST00000262304 CCDC112Q8NEF3 446 aa12.14□□□□□ -0.47
PKD1-201ENST00000262304 KIF15Q9NS87 1388 aa12.14□□□□□ -0.47
PKD1-201ENST00000262304 C1orf115Q9H7X2 142 aa12.14□□□□□ -0.47
PKD1-201ENST00000262304 CFAP45Q9UL16 551 aa12.14□□□□□ -0.47
PKD1-201ENST00000262304 KRT18P05783 430 aaKnown RBP12.14□□□□□ -0.47
PKD1-201ENST00000262304 MTERF4Q7Z6M4 381 aaKnown RBP12.13□□□□□ -0.47
PKD1-201ENST00000262304 SERPINC1P01008 464 aa12.13□□□□□ -0.47
PKD1-201ENST00000262304 CCDC181Q5TID7 509 aa12.13□□□□□ -0.47
PKD1-201ENST00000262304 PHLDB1Q86UU1 1377 aa12.13□□□□□ -0.47
PKD1-201ENST00000262304 ATP2B2Q01814 1243 aa12.13□□□□□ -0.47
PKD1-201ENST00000262304 G3BP1Q13283 466 aaKnown RBP eCLIP12.13□□□□□ -0.47
PKD1-201ENST00000262304 NEUROD6Q96NK8 337 aa12.13□□□□□ -0.47
PKD1-201ENST00000262304 ERICH2A1L162 156 aa12.12□□□□□ -0.47
PKD1-201ENST00000262304 NUCB2P80303 420 aa12.12□□□□□ -0.47
PKD1-201ENST00000262304 WWC2Q6AWC2 1192 aa12.12□□□□□ -0.47
PKD1-201ENST00000262304 GOLGA6L7A0A1B0GV03 622 aa12.12□□□□□ -0.47
PKD1-201ENST00000262304 EZRP15311 586 aaKnown RBP12.12□□□□□ -0.47
PKD1-201ENST00000262304 PPM1FP49593 454 aaPredicted RBP12.12□□□□□ -0.47
PKD1-201ENST00000262304 LRRFIP1Q32MZ4 808 aaKnown RBP12.12□□□□□ -0.47
PKD1-201ENST00000262304 AIMP1Q12904 312 aaKnown RBP12.12□□□□□ -0.47
PKD1-201ENST00000262304 IGF1RP08069 1367 aa12.12□□□□□ -0.47
PKD1-201ENST00000262304 PPFIBP1Q86W92 1011 aa12.12□□□□□ -0.47
PKD1-201ENST00000262304 GBP2P32456 591 aaPredicted RBP12.12□□□□□ -0.47
PKD1-201ENST00000262304 UBE4AQ14139 1066 aa12.12□□□□□ -0.47
PKD1-201ENST00000262304 EVA1CP58658 441 aa12.11□□□□□ -0.47
PKD1-201ENST00000262304 SMARCE1Q969G3 411 aa12.11□□□□□ -0.47
PKD1-201ENST00000262304 CDK5RAP3Q96JB5 506 aa12.11□□□□□ -0.47
PKD1-201ENST00000262304 FAM107BQ9H098 131 aa12.11□□□□□ -0.47
PKD1-201ENST00000262304 MINK1Q8N4C8 1332 aaPredicted RBP12.11□□□□□ -0.47
PKD1-201ENST00000262304 ATP2C2O75185 946 aa12.11□□□□□ -0.47
PKD1-201ENST00000262304 FAM177BA6PVY3 158 aa12.11□□□□□ -0.47
PKD1-201ENST00000262304 GTF2F1P35269 517 aaKnown RBP eCLIP12.11□□□□□ -0.473e-8■■■■■ 34.4
PKD1-201ENST00000262304 APAF1O14727 1248 aa12.1□□□□□ -0.47
PKD1-201ENST00000262304 C1orf141Q5JVX7 400 aa12.1□□□□□ -0.47
PKD1-201ENST00000262304 MYOM3Q5VTT5 1437 aa12.1□□□□□ -0.47
PKD1-201ENST00000262304 FILIP1LQ4L180 1135 aa12.1□□□□□ -0.47
PKD1-201ENST00000262304 PLCD3Q8N3E9 789 aa12.1□□□□□ -0.47
PKD1-201ENST00000262304 TNMDQ9H2S6 317 aa12.1□□□□□ -0.47
PKD1-201ENST00000262304 SYCP1Q15431 976 aa12.1□□□□□ -0.47
PKD1-201ENST00000262304 PDCL2Q8N4E4 241 aa12.1□□□□□ -0.47
PKD1-201ENST00000262304 RALYLQ86SE5 291 aaKnown RBP12.1□□□□□ -0.47
PKD1-201ENST00000262304 RNF20Q5VTR2 975 aa12.09□□□□□ -0.47
PKD1-201ENST00000262304 STK38Q15208 465 aa12.09□□□□□ -0.47
PKD1-201ENST00000262304 TANGO6Q9C0B7 1094 aa12.09□□□□□ -0.47
PKD1-201ENST00000262304 USP47Q96K76 1375 aa12.09□□□□□ -0.47
PKD1-201ENST00000262304 PDCL3Q9H2J4 239 aa12.09□□□□□ -0.47
PKD1-201ENST00000262304 GOPCQ9HD26 462 aa12.09□□□□□ -0.47
PKD1-201ENST00000262304 ZNHIT6Q9NWK9 470 aaKnown RBP12.09□□□□□ -0.47
PKD1-201ENST00000262304 ANKRD18AQ8IVF6 992 aa12.08□□□□□ -0.48
PKD1-201ENST00000262304 AEBP2Q6ZN18 517 aaPredicted RBP12.08□□□□□ -0.48
PKD1-201ENST00000262304 NCAPD3P42695 1498 aa12.08□□□□□ -0.48
PKD1-201ENST00000262304 SSBP05455 408 aaKnown RBP eCLIP12.08□□□□□ -0.48
PKD1-201ENST00000262304 INTS3Q68E01 1043 aaKnown RBP12.08□□□□□ -0.48
PKD1-201ENST00000262304 FILIP1Q7Z7B0 1213 aa12.08□□□□□ -0.48
PKD1-201ENST00000262304 RRP9O43818 475 aaKnown RBP12.08□□□□□ -0.48
PKD1-201ENST00000262304 CUX1P39880 1505 aa12.08□□□□□ -0.48
PKD1-201ENST00000262304 KIAA1328Q86T90 577 aa12.08□□□□□ -0.48
PKD1-201ENST00000262304 RAI14Q9P0K7 980 aa12.07□□□□□ -0.48
PKD1-201ENST00000262304 NEK4P51957 841 aa12.07□□□□□ -0.48
PKD1-201ENST00000262304 PDE3BQ13370 1112 aa12.07□□□□□ -0.48
PKD1-201ENST00000262304 EIF3JO75822 258 aaKnown RBP12.06□□□□□ -0.48
PKD1-201ENST00000262304 PSME1Q06323 249 aa12.06□□□□□ -0.48
PKD1-201ENST00000262304 MAP2K1Q02750 393 aaPredicted RBP12.06□□□□□ -0.48
PKD1-201ENST00000262304 TMCO3Q6UWJ1 677 aa12.06□□□□□ -0.48
PKD1-201ENST00000262304 MYBBP1AQ9BQG0 1328 aaKnown RBP12.06□□□□□ -0.48
PKD1-201ENST00000262304 DZIP1LQ8IYY4 767 aaKnown RBP12.06□□□□□ -0.48
PKD1-201ENST00000262304 SLC26A8Q96RN1 970 aa12.06□□□□□ -0.48
PKD1-201ENST00000262304 HMOX1P09601 288 aa12.06□□□□□ -0.48
PKD1-201ENST00000262304 TMCO4Q5TGY1 634 aa12.06□□□□□ -0.48
PKD1-201ENST00000262304 BRMS1Q9HCU9 246 aa12.06□□□□□ -0.48
PKD1-201ENST00000262304 MATR3P43243 847 aaKnown RBP eCLIP12.06□□□□□ -0.48
PKD1-201ENST00000262304 CAMK4Q16566 473 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms