RNA–Protein interactions for RNA: ENST00000255531.8

PCDH19-201, Transcript of protocadherin 19, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDH19, Length 7,937 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19-201ENST00000255531 CEP120Q8N960 986 aa11.35□□□□□ -0.59
PCDH19-201ENST00000255531 FERP16591 822 aa11.35□□□□□ -0.59
PCDH19-201ENST00000255531 ANAPC15P60006 121 aa11.35□□□□□ -0.59
PCDH19-201ENST00000255531 UBE4AQ14139 1066 aa11.35□□□□□ -0.59
PCDH19-201ENST00000255531 DZIP1LQ8IYY4 767 aaKnown RBP11.35□□□□□ -0.59
PCDH19-201ENST00000255531 FBF1Q8TES7 1133 aa11.35□□□□□ -0.59
PCDH19-201ENST00000255531 ZBTB17Q13105 803 aa11.34□□□□□ -0.59
PCDH19-201ENST00000255531 IMMTQ16891 758 aaKnown RBP11.34□□□□□ -0.59
PCDH19-201ENST00000255531 PDCP20941 246 aa11.34□□□□□ -0.59
PCDH19-201ENST00000255531 PPP1R12BO60237 982 aaPredicted RBP11.34□□□□□ -0.59
PCDH19-201ENST00000255531 CETN2P41208 172 aa11.34□□□□□ -0.59
PCDH19-201ENST00000255531 DNAJC21Q5F1R6 531 aaKnown RBP11.34□□□□□ -0.59
PCDH19-201ENST00000255531 MRVI1Q9Y6F6 885 aa11.34□□□□□ -0.59
PCDH19-201ENST00000255531 ARID4AP29374 1257 aaPredicted RBP11.33□□□□□ -0.6
PCDH19-201ENST00000255531 ERC1Q8IUD2 1116 aa11.33□□□□□ -0.6
PCDH19-201ENST00000255531 FAM177A1Q8N128 213 aaPredicted RBP11.33□□□□□ -0.6
PCDH19-201ENST00000255531 INTS3Q68E01 1043 aaKnown RBP11.33□□□□□ -0.6
PCDH19-201ENST00000255531 ZHX1Q9UKY1 873 aaPredicted RBP11.33□□□□□ -0.6
PCDH19-201ENST00000255531 RSRC1Q96IZ7 334 aaKnown RBP11.33□□□□□ -0.6
PCDH19-201ENST00000255531 CDK5RAP3Q96JB5 506 aa11.33□□□□□ -0.6
PCDH19-201ENST00000255531 BRPF3Q9ULD4 1205 aa11.33□□□□□ -0.6
PCDH19-201ENST00000255531 KIF5BP33176 963 aa11.33□□□□□ -0.6
PCDH19-201ENST00000255531 TAF4BQ92750 862 aa11.33□□□□□ -0.6
PCDH19-201ENST00000255531 FILIP1Q7Z7B0 1213 aa11.33□□□□□ -0.6
PCDH19-201ENST00000255531 NEBLO76041 1014 aa11.32□□□□□ -0.6
PCDH19-201ENST00000255531 RAD21O60216 631 aa11.32□□□□□ -0.6
PCDH19-201ENST00000255531 GBP7Q8N8V2 638 aaPredicted RBP11.32□□□□□ -0.6
PCDH19-201ENST00000255531 SMC6Q96SB8 1091 aa11.32□□□□□ -0.6
PCDH19-201ENST00000255531 POTEB2H3BUK9 544 aa11.32□□□□□ -0.6
PCDH19-201ENST00000255531 TTC31Q49AM3 519 aaPredicted RBP11.32□□□□□ -0.6
PCDH19-201ENST00000255531 TACC1O75410 805 aa11.32□□□□□ -0.6
PCDH19-201ENST00000255531 U2AF1L5P0DN76 240 aaPredicted RBP11.32□□□□□ -0.6
PCDH19-201ENST00000255531 U2AF1Q01081 240 aaKnown RBP eCLIP11.32□□□□□ -0.6
PCDH19-201ENST00000255531 SH2D4BQ5SQS7 431 aa11.32□□□□□ -0.6
PCDH19-201ENST00000255531 GTF2F1P35269 517 aaKnown RBP eCLIP11.31□□□□□ -0.6
PCDH19-201ENST00000255531 KIF18AQ8NI77 898 aa11.31□□□□□ -0.6
PCDH19-201ENST00000255531 ESPNB1AK53 854 aa11.31□□□□□ -0.6
PCDH19-201ENST00000255531 C10orf67Q8IYJ2 551 aa11.31□□□□□ -0.6
PCDH19-201ENST00000255531 TRERF1Q96PN7 1200 aa11.31□□□□□ -0.6
PCDH19-201ENST00000255531 TAOK3Q9H2K8 898 aa11.31□□□□□ -0.6
PCDH19-201ENST00000255531 A0A1B0GUA9 196 aa11.31□□□□□ -0.6
PCDH19-201ENST00000255531 ANKS4BQ8N8V4 417 aa11.31□□□□□ -0.6
PCDH19-201ENST00000255531 PPFIBP2Q8ND30 876 aa11.31□□□□□ -0.6
PCDH19-201ENST00000255531 IL27Q8NEV9 243 aa11.31□□□□□ -0.6
PCDH19-201ENST00000255531 ZNF396Q96N95 335 aaPredicted RBP11.31□□□□□ -0.6
PCDH19-201ENST00000255531 RFC1P35251 1148 aaPredicted RBP11.31□□□□□ -0.6
PCDH19-201ENST00000255531 SRPK2P78362 688 aaKnown RBP11.31□□□□□ -0.6
PCDH19-201ENST00000255531 TMEM132AQ24JP5 1023 aa11.31□□□□□ -0.6
PCDH19-201ENST00000255531 SMARCC1Q92922 1105 aaPredicted RBP11.31□□□□□ -0.6
PCDH19-201ENST00000255531 ROCK1Q13464 1354 aa11.31□□□□□ -0.6
PCDH19-201ENST00000255531 CASQ1P31415 396 aa11.3□□□□□ -0.6
PCDH19-201ENST00000255531 EPB41L2O43491 1005 aaKnown RBP11.3□□□□□ -0.6
PCDH19-201ENST00000255531 MSL1Q68DK7 614 aa11.3□□□□□ -0.6
PCDH19-201ENST00000255531 JMYQ8N9B5 988 aa11.3□□□□□ -0.6
PCDH19-201ENST00000255531 ZNF397Q8NF99 534 aaPredicted RBP11.3□□□□□ -0.6
PCDH19-201ENST00000255531 NUP133Q8WUM0 1156 aa11.3□□□□□ -0.6
PCDH19-201ENST00000255531 FMNL2Q96PY5 1086 aa11.3□□□□□ -0.6
PCDH19-201ENST00000255531 HOOK3Q86VS8 718 aa11.3□□□□□ -0.6
PCDH19-201ENST00000255531 STMN1P16949 149 aa11.3□□□□□ -0.6
PCDH19-201ENST00000255531 MCM2P49736 904 aa11.3□□□□□ -0.6
PCDH19-201ENST00000255531 RPUSD2Q8IZ73 545 aaKnown RBP11.3□□□□□ -0.6
PCDH19-201ENST00000255531 SEPT8Q92599 483 aa11.3□□□□□ -0.6
PCDH19-201ENST00000255531 PSMA5P28066 241 aa11.29□□□□□ -0.6
PCDH19-201ENST00000255531 GBP6Q6ZN66 633 aa11.29□□□□□ -0.6
PCDH19-201ENST00000255531 TRIM21P19474 475 aaKnown RBP11.29□□□□□ -0.6
PCDH19-201ENST00000255531 HDGFL2Q7Z4V5 671 aaPredicted RBP11.29□□□□□ -0.6
PCDH19-201ENST00000255531 SREK1Q8WXA9 508 aaKnown RBP11.29□□□□□ -0.6
PCDH19-201ENST00000255531 MAP3K7CLP57077 242 aa11.29□□□□□ -0.6
PCDH19-201ENST00000255531 MKRN1Q9UHC7 482 aaKnown RBP11.29□□□□□ -0.6
PCDH19-201ENST00000255531 ANAPC4Q9UJX5 808 aa11.29□□□□□ -0.6
PCDH19-201ENST00000255531 NBPF1Q3BBV0 1214 aa11.29□□□□□ -0.6
PCDH19-201ENST00000255531 ARHGAP29Q52LW3 1261 aa11.29□□□□□ -0.6
PCDH19-201ENST00000255531 ABCC9O60706 1549 aa11.29□□□□□ -0.6
PCDH19-201ENST00000255531 RALYLQ86SE5 291 aaKnown RBP11.29□□□□□ -0.6
PCDH19-201ENST00000255531 GSTTP1A0A1W2PQM5 241 aa11.28□□□□□ -0.6
PCDH19-201ENST00000255531 DYNC1I1O14576 645 aa11.28□□□□□ -0.6
PCDH19-201ENST00000255531 WHAMMQ8TF30 809 aa11.28□□□□□ -0.6
PCDH19-201ENST00000255531 NSRP1Q9H0G5 558 aaKnown RBP11.28□□□□□ -0.6
PCDH19-201ENST00000255531 GRPEL1Q9HAV7 217 aa11.28□□□□□ -0.6
PCDH19-201ENST00000255531 CWC22Q9HCG8 908 aaKnown RBP11.28□□□□□ -0.6
PCDH19-201ENST00000255531 PPFIA2O75334 1257 aa11.28□□□□□ -0.6
PCDH19-201ENST00000255531 PTPN14Q15678 1187 aa11.28□□□□□ -0.6
PCDH19-201ENST00000255531 GOPCQ9HD26 462 aa11.28□□□□□ -0.6
PCDH19-201ENST00000255531 SPECC1Q5M775 1068 aa11.28□□□□□ -0.6
PCDH19-201ENST00000255531 CWC25Q9NXE8 425 aaPredicted RBP11.28□□□□□ -0.6
PCDH19-201ENST00000255531 ZNF853P0CG23 659 aa11.28□□□□□ -0.6
PCDH19-201ENST00000255531 RABGAP1Q9Y3P9 1069 aa11.28□□□□□ -0.6
PCDH19-201ENST00000255531 ZSCAN12O43309 604 aa11.27□□□□□ -0.6
PCDH19-201ENST00000255531 GTF2E1P29083 439 aaPredicted RBP11.27□□□□□ -0.6
PCDH19-201ENST00000255531 LMAN1P49257 510 aa11.27□□□□□ -0.6
PCDH19-201ENST00000255531 CLUAP1Q96AJ1 413 aa11.27□□□□□ -0.61
PCDH19-201ENST00000255531 TTC36A6NLP5 189 aa11.27□□□□□ -0.61
PCDH19-201ENST00000255531 KIF5CO60282 957 aa11.27□□□□□ -0.61
PCDH19-201ENST00000255531 POTEJP0CG39 1038 aa11.27□□□□□ -0.61
PCDH19-201ENST00000255531 PPP1R9BQ96SB3 815 aa11.27□□□□□ -0.61
PCDH19-201ENST00000255531 NAA15Q9BXJ9 866 aaKnown RBP11.27□□□□□ -0.61
PCDH19-201ENST00000255531 LUC7L2Q9Y383 392 aaKnown RBP11.27□□□□□ -0.61
PCDH19-201ENST00000255531 FSD2A1L4K1 749 aa11.27□□□□□ -0.61
PCDH19-201ENST00000255531 RAB3IL1Q8TBN0 382 aa11.27□□□□□ -0.61
PCDH19-201ENST00000255531 C22orf23Q9BZE7 217 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms