RNA–Protein interactions for RNA: ENST00000237289.8

TNFAIP3-201, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP3, Length 4,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-201ENST00000237289 ASXL1Q8IXJ9 1541 aa14.85□□□□□ -0.03
TNFAIP3-201ENST00000237289 PRDM11Q9NQV5 511 aa14.85□□□□□ -0.03
TNFAIP3-201ENST00000237289 A0A1W2PP64 1363 aa14.85□□□□□ -0.03
TNFAIP3-201ENST00000237289 ZC3H6P61129 1189 aaKnown RBP14.84□□□□□ -0.03
TNFAIP3-201ENST00000237289 PRKRIP1Q9H875 184 aaPredicted RBP14.84□□□□□ -0.03
TNFAIP3-201ENST00000237289 MYBBP1AQ9BQG0 1328 aaKnown RBP14.83□□□□□ -0.04
TNFAIP3-201ENST00000237289 LRRC7Q96NW7 1537 aa14.83□□□□□ -0.04
TNFAIP3-201ENST00000237289 C1orf167Q5SNV9 1468 aa14.82□□□□□ -0.04
TNFAIP3-201ENST00000237289 ADAMTS2O95450 1211 aa14.82□□□□□ -0.04
TNFAIP3-201ENST00000237289 DCCP43146 1447 aa14.81□□□□□ -0.04
TNFAIP3-201ENST00000237289 FYB1O15117 783 aa14.81□□□□□ -0.04
TNFAIP3-201ENST00000237289 CARD14Q9BXL6 1004 aa14.81□□□□□ -0.04
TNFAIP3-201ENST00000237289 PNNQ9H307 717 aaKnown RBP14.81□□□□□ -0.04
TNFAIP3-201ENST00000237289 QRICH2Q9H0J4 1663 aa14.81□□□□□ -0.04
TNFAIP3-201ENST00000237289 TULP4Q9NRJ4 1543 aa14.81□□□□□ -0.04
TNFAIP3-201ENST00000237289 NRXN3Q9Y4C0 1643 aa14.8□□□□□ -0.04
TNFAIP3-201ENST00000237289 U2AF1L5P0DN76 240 aaPredicted RBP14.8□□□□□ -0.04
TNFAIP3-201ENST00000237289 U2AF1Q01081 240 aaKnown RBP eCLIP14.8□□□□□ -0.047e-7■■■■□ 23.3
TNFAIP3-201ENST00000237289 EDC4Q6P2E9 1401 aaKnown RBP14.8□□□□□ -0.04
TNFAIP3-201ENST00000237289 MTHFSP49914 203 aa14.79□□□□□ -0.04
TNFAIP3-201ENST00000237289 ARHGEF10O15013 1369 aa14.79□□□□□ -0.04
TNFAIP3-201ENST00000237289 NSD2O96028 1365 aa14.79□□□□□ -0.04
TNFAIP3-201ENST00000237289 RRS1Q15050 365 aaKnown RBP14.79□□□□□ -0.04
TNFAIP3-201ENST00000237289 CABLES1Q8TDN4 633 aa14.79□□□□□ -0.04
TNFAIP3-201ENST00000237289 MAPK8IP3Q9UPT6 1336 aa14.79□□□□□ -0.04
TNFAIP3-201ENST00000237289 STRN4Q9NRL3 753 aa14.78□□□□□ -0.04
TNFAIP3-201ENST00000237289 DIAPH1O60610 1272 aaKnown RBP14.77□□□□□ -0.04
TNFAIP3-201ENST00000237289 NGLY1Q96IV0 654 aa14.77□□□□□ -0.04
TNFAIP3-201ENST00000237289 ZRANB1Q9UGI0 708 aa14.77□□□□□ -0.04
TNFAIP3-201ENST00000237289 ATP7BP35670 1465 aa14.77□□□□□ -0.05
TNFAIP3-201ENST00000237289 BRD4O60885 1362 aaPredicted RBP14.77□□□□□ -0.05
TNFAIP3-201ENST00000237289 PHF23Q9BUL5 403 aaPredicted RBP14.77□□□□□ -0.05
TNFAIP3-201ENST00000237289 NLRP2Q9NX02 1062 aa14.76□□□□□ -0.05
TNFAIP3-201ENST00000237289 PPP2R1AP30153 589 aa14.76□□□□□ -0.05
TNFAIP3-201ENST00000237289 CCER2I3L3R5 266 aa14.76□□□□□ -0.05
TNFAIP3-201ENST00000237289 GCP02774 474 aa14.76□□□□□ -0.05
TNFAIP3-201ENST00000237289 AMER1Q5JTC6 1135 aaPredicted RBP14.76□□□□□ -0.05
TNFAIP3-201ENST00000237289 SALL2Q9Y467 1007 aaPredicted RBP14.75□□□□□ -0.05
TNFAIP3-201ENST00000237289 ARHGEF28Q8N1W1 1705 aaKnown RBP14.75□□□□□ -0.05
TNFAIP3-201ENST00000237289 USP6P35125 1406 aa14.75□□□□□ -0.05
TNFAIP3-201ENST00000237289 MST1RQ04912 1400 aa14.74□□□□□ -0.05
TNFAIP3-201ENST00000237289 PER1O15534 1290 aaPredicted RBP14.73□□□□□ -0.05
TNFAIP3-201ENST00000237289 CHD2O14647 1828 aaKnown RBP14.73□□□□□ -0.05
TNFAIP3-201ENST00000237289 CHRNA2Q15822 529 aa14.73□□□□□ -0.05
TNFAIP3-201ENST00000237289 TOM1L2Q6ZVM7 507 aa14.73□□□□□ -0.05
TNFAIP3-201ENST00000237289 USP35Q9P2H5 1018 aa14.73□□□□□ -0.05
TNFAIP3-201ENST00000237289 STRCQ7RTU9 1775 aa14.72□□□□□ -0.05
TNFAIP3-201ENST00000237289 SMG6Q86US8 1419 aaKnown RBP14.72□□□□□ -0.05
TNFAIP3-201ENST00000237289 SPATA31A3Q5VYP0 1347 aa14.72□□□□□ -0.05
TNFAIP3-201ENST00000237289 EMILIN1Q9Y6C2 1016 aa14.72□□□□□ -0.05
TNFAIP3-201ENST00000237289 NEUROD2Q15784 382 aa14.72□□□□□ -0.05
TNFAIP3-201ENST00000237289 C8orf37Q96NL8 207 aa14.72□□□□□ -0.05
TNFAIP3-201ENST00000237289 FBLN1P23142 703 aa14.71□□□□□ -0.05
TNFAIP3-201ENST00000237289 HNRNPUQ00839 825 aaKnown RBP eCLIP14.71□□□□□ -0.05
TNFAIP3-201ENST00000237289 CDC42BPGQ6DT37 1551 aa14.71□□□□□ -0.05
TNFAIP3-201ENST00000237289 XRN1Q8IZH2 1706 aaKnown RBP14.71□□□□□ -0.05
TNFAIP3-201ENST00000237289 POLR3AO14802 1390 aaPredicted RBP14.7□□□□□ -0.06
TNFAIP3-201ENST00000237289 NWD1Q149M9 1564 aa14.7□□□□□ -0.06
TNFAIP3-201ENST00000237289 HSPA1LP34931 641 aa14.7□□□□□ -0.06
TNFAIP3-201ENST00000237289 RAPGEF4Q8WZA2 1011 aa14.7□□□□□ -0.06
TNFAIP3-201ENST00000237289 CENPBP07199 599 aaPredicted RBP14.69□□□□□ -0.06
TNFAIP3-201ENST00000237289 KNDC1Q76NI1 1749 aa14.69□□□□□ -0.06
TNFAIP3-201ENST00000237289 SBNO1A3KN83 1393 aa14.69□□□□□ -0.06
TNFAIP3-201ENST00000237289 SOS2Q07890 1332 aaPredicted RBP14.67□□□□□ -0.06
TNFAIP3-201ENST00000237289 RTF1Q92541 710 aaKnown RBP14.67□□□□□ -0.06
TNFAIP3-201ENST00000237289 TNS3Q68CZ2 1445 aa14.66□□□□□ -0.06
TNFAIP3-201ENST00000237289 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.66□□□□□ -0.06
TNFAIP3-201ENST00000237289 NPC1L1Q9UHC9 1359 aa14.66□□□□□ -0.06
TNFAIP3-201ENST00000237289 HMOX1P09601 288 aa14.66□□□□□ -0.06
TNFAIP3-201ENST00000237289 CPSF1Q10570 1443 aaKnown RBP14.66□□□□□ -0.06
TNFAIP3-201ENST00000237289 SENP3-EIF4A1A0A087X0R7 540 aa14.66□□□□□ -0.06
TNFAIP3-201ENST00000237289 POLKQ9UBT6 870 aa14.66□□□□□ -0.06
TNFAIP3-201ENST00000237289 FBXO41Q8TF61 875 aa14.65□□□□□ -0.06
TNFAIP3-201ENST00000237289 JCADQ9P266 1359 aa14.65□□□□□ -0.06
TNFAIP3-201ENST00000237289 MAP3K19Q56UN5 1328 aa14.65□□□□□ -0.06
TNFAIP3-201ENST00000237289 ANKRD24Q8TF21 1146 aa14.65□□□□□ -0.06
TNFAIP3-201ENST00000237289 HSP90AB2PQ58FF8 381 aa14.64□□□□□ -0.07
TNFAIP3-201ENST00000237289 BTG4Q9NY30 223 aa14.64□□□□□ -0.07
TNFAIP3-201ENST00000237289 SULT6B1Q6IMI4 303 aa14.63□□□□□ -0.07
TNFAIP3-201ENST00000237289 CCDC146Q8IYE0 955 aa14.63□□□□□ -0.07
TNFAIP3-201ENST00000237289 IP6K1Q92551 441 aa14.63□□□□□ -0.07
TNFAIP3-201ENST00000237289 TATP17735 454 aaPredicted RBP14.63□□□□□ -0.07
TNFAIP3-201ENST00000237289 SETD1AO15047 1707 aaKnown RBP14.63□□□□□ -0.07
TNFAIP3-201ENST00000237289 FLT4P35916 1363 aa14.63□□□□□ -0.07
TNFAIP3-201ENST00000237289 C1orf141Q5JVX7 400 aa14.63□□□□□ -0.07
TNFAIP3-201ENST00000237289 ADGRB2O60241 1585 aa14.62□□□□□ -0.07
TNFAIP3-201ENST00000237289 HOXC9P31274 260 aa14.62□□□□□ -0.07
TNFAIP3-201ENST00000237289 PARD3Q8TEW0 1356 aa14.6□□□□□ -0.07
TNFAIP3-201ENST00000237289 KIAA0232Q92628 1395 aa14.6□□□□□ -0.07
TNFAIP3-201ENST00000237289 LAS1LQ9Y4W2 734 aaKnown RBP14.6□□□□□ -0.07
TNFAIP3-201ENST00000237289 PLEKHO1Q53GL0 409 aaPredicted RBP14.6□□□□□ -0.07
TNFAIP3-201ENST00000237289 ARHGEF25Q86VW2 580 aa14.6□□□□□ -0.07
TNFAIP3-201ENST00000237289 SPATA31A6Q5VVP1 1343 aa14.59□□□□□ -0.07
TNFAIP3-201ENST00000237289 USP21Q9UK80 565 aa14.59□□□□□ -0.07
TNFAIP3-201ENST00000237289 LTBP4Q8N2S1 1624 aa14.59□□□□□ -0.07
TNFAIP3-201ENST00000237289 NALCNQ8IZF0 1738 aa14.59□□□□□ -0.07
TNFAIP3-201ENST00000237289 PRKAR2BP31323 418 aa14.59□□□□□ -0.07
TNFAIP3-201ENST00000237289 LMOD3Q0VAK6 560 aa14.59□□□□□ -0.07
TNFAIP3-201ENST00000237289 USHBP1Q8N6Y0 703 aa14.59□□□□□ -0.07
TNFAIP3-201ENST00000237289 ADAMTS8Q9UP79 889 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms