RNA–Protein interactions for RNA: ENST00000235453.8

DENND1B-201, Transcript of DENN domain containing 1B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DENND1B, Length 2,195 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND1B-201ENST00000235453 PMFBP1Q8TBY8 1022 aa12.42□□□□□ -0.42
DENND1B-201ENST00000235453 KIF3AQ9Y496 699 aa12.42□□□□□ -0.42
DENND1B-201ENST00000235453 WDR7Q9Y4E6 1490 aa12.41□□□□□ -0.42
DENND1B-201ENST00000235453 NPC1L1Q9UHC9 1359 aa12.41□□□□□ -0.42
DENND1B-201ENST00000235453 TIGD1Q96MW7 591 aa12.4□□□□□ -0.42
DENND1B-201ENST00000235453 GEMIN8Q9NWZ8 242 aaKnown RBP12.4□□□□□ -0.42
DENND1B-201ENST00000235453 DUOX2Q9NRD8 1548 aa12.4□□□□□ -0.42
DENND1B-201ENST00000235453 SENP3-EIF4A1A0A087X0R7 540 aa12.4□□□□□ -0.42
DENND1B-201ENST00000235453 CLGNO14967 610 aa12.4□□□□□ -0.42
DENND1B-201ENST00000235453 SYCP1Q15431 976 aa12.4□□□□□ -0.42
DENND1B-201ENST00000235453 CLUAP1Q96AJ1 413 aa12.4□□□□□ -0.42
DENND1B-201ENST00000235453 IQGAP3Q86VI3 1631 aa12.4□□□□□ -0.43
DENND1B-201ENST00000235453 NKTRP30414 1462 aaKnown RBP12.39□□□□□ -0.43
DENND1B-201ENST00000235453 YEATS2Q9ULM3 1422 aa12.39□□□□□ -0.43
DENND1B-201ENST00000235453 PDCL2Q8N4E4 241 aa12.39□□□□□ -0.43
DENND1B-201ENST00000235453 GOLGA2Q08379 1002 aa12.39□□□□□ -0.43
DENND1B-201ENST00000235453 SLFN5Q08AF3 891 aa12.39□□□□□ -0.43
DENND1B-201ENST00000235453 AXDND1Q5T1B0 1012 aaPredicted RBP12.39□□□□□ -0.43
DENND1B-201ENST00000235453 CARD11Q9BXL7 1154 aa12.39□□□□□ -0.43
DENND1B-201ENST00000235453 EFCC1Q9HA90 598 aa12.39□□□□□ -0.43
DENND1B-201ENST00000235453 SPAG9O60271 1321 aaKnown RBP12.38□□□□□ -0.43
DENND1B-201ENST00000235453 ZNF771Q7L3S4 317 aaPredicted RBP12.38□□□□□ -0.43
DENND1B-201ENST00000235453 DHX37Q8IY37 1157 aaKnown RBP12.38□□□□□ -0.43
DENND1B-201ENST00000235453 CALCOCO1Q9P1Z2 691 aa12.38□□□□□ -0.43
DENND1B-201ENST00000235453 ASXL2Q76L83 1435 aa12.38□□□□□ -0.43
DENND1B-201ENST00000235453 PER1O15534 1290 aaPredicted RBP12.37□□□□□ -0.43
DENND1B-201ENST00000235453 KCNJ4P48050 445 aa12.37□□□□□ -0.43
DENND1B-201ENST00000235453 NGEFQ8N5V2 710 aa12.37□□□□□ -0.43
DENND1B-201ENST00000235453 PIBF1Q8WXW3 757 aa12.37□□□□□ -0.43
DENND1B-201ENST00000235453 ARID3AQ99856 593 aa12.37□□□□□ -0.43
DENND1B-201ENST00000235453 FANCAO15360 1455 aa12.37□□□□□ -0.43
DENND1B-201ENST00000235453 SLFN14P0C7P3 912 aa12.37□□□□□ -0.43
DENND1B-201ENST00000235453 SPTLC3Q9NUV7 552 aa12.37□□□□□ -0.43
DENND1B-201ENST00000235453 PLEKHH1Q9ULM0 1364 aa12.37□□□□□ -0.43
DENND1B-201ENST00000235453 ZFYVE16Q7Z3T8 1539 aa12.37□□□□□ -0.43
DENND1B-201ENST00000235453 RBSNQ9H1K0 784 aa12.36□□□□□ -0.43
DENND1B-201ENST00000235453 ABCA9Q8IUA7 1624 aa12.36□□□□□ -0.43
DENND1B-201ENST00000235453 ST20-MTHFSA0A0A6YYL1 179 aa12.36□□□□□ -0.43
DENND1B-201ENST00000235453 ZBTB22O15209 634 aa12.36□□□□□ -0.43
DENND1B-201ENST00000235453 CTIFO43310 598 aaKnown RBP12.36□□□□□ -0.43
DENND1B-201ENST00000235453 ERBINQ96RT1 1412 aa12.36□□□□□ -0.43
DENND1B-201ENST00000235453 BCL2L12Q9HB09 334 aa12.36□□□□□ -0.43
DENND1B-201ENST00000235453 PSEN1P49768 467 aa12.35□□□□□ -0.43
DENND1B-201ENST00000235453 DDX49Q9Y6V7 483 aaKnown RBP12.35□□□□□ -0.43
DENND1B-201ENST00000235453 A2MP01023 1474 aa12.35□□□□□ -0.43
DENND1B-201ENST00000235453 MAGI2Q86UL8 1455 aa12.35□□□□□ -0.43
DENND1B-201ENST00000235453 FKBP5Q13451 457 aaPredicted RBP12.35□□□□□ -0.43
DENND1B-201ENST00000235453 ZSCAN23Q3MJ62 389 aa12.35□□□□□ -0.43
DENND1B-201ENST00000235453 SPRYD3Q8NCJ5 442 aa12.35□□□□□ -0.43
DENND1B-201ENST00000235453 ZNF622Q969S3 477 aaKnown RBP eCLIP12.33□□□□□ -0.44
DENND1B-201ENST00000235453 DIAPH3Q9NSV4 1193 aa12.33□□□□□ -0.44
DENND1B-201ENST00000235453 TRPM1Q7Z4N2 1603 aa12.33□□□□□ -0.44
DENND1B-201ENST00000235453 PRAG1Q86YV5 1406 aa12.33□□□□□ -0.44
DENND1B-201ENST00000235453 ADGRL1O94910 1474 aa12.32□□□□□ -0.44
DENND1B-201ENST00000235453 BAG4O95429 457 aaKnown RBP12.32□□□□□ -0.44
DENND1B-201ENST00000235453 MORC2Q9Y6X9 1032 aaPredicted RBP12.32□□□□□ -0.44
DENND1B-201ENST00000235453 ATP7AQ04656 1500 aa12.32□□□□□ -0.44
DENND1B-201ENST00000235453 ARAP3Q8WWN8 1544 aa12.32□□□□□ -0.44
DENND1B-201ENST00000235453 CAPN2P17655 700 aa12.32□□□□□ -0.44
DENND1B-201ENST00000235453 LRSAM1Q6UWE0 723 aa12.32□□□□□ -0.44
DENND1B-201ENST00000235453 PDZRN3Q9UPQ7 1066 aa12.32□□□□□ -0.44
DENND1B-201ENST00000235453 MFAP1P55081 439 aaKnown RBP12.31□□□□□ -0.44
DENND1B-201ENST00000235453 NOLC1Q14978 699 aaKnown RBP eCLIP12.31□□□□□ -0.44
DENND1B-201ENST00000235453 TERF2Q15554 542 aa12.31□□□□□ -0.44
DENND1B-201ENST00000235453 INO80Q9ULG1 1556 aaPredicted RBP12.31□□□□□ -0.44
DENND1B-201ENST00000235453 DDX41Q9UJV9 622 aaKnown RBP12.3□□□□□ -0.44
DENND1B-201ENST00000235453 LAMC1P11047 1609 aa12.3□□□□□ -0.44
DENND1B-201ENST00000235453 KIF3BO15066 747 aa12.3□□□□□ -0.44
DENND1B-201ENST00000235453 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.3□□□□□ -0.44
DENND1B-201ENST00000235453 SPDYE4A6NLX3 237 aa12.29□□□□□ -0.44
DENND1B-201ENST00000235453 E9PSI1 815 aa12.29□□□□□ -0.44
DENND1B-201ENST00000235453 U2AF2P26368 475 aaKnown RBP eCLIP12.29□□□□□ -0.44
DENND1B-201ENST00000235453 PRIM1P49642 420 aaKnown RBP12.29□□□□□ -0.44
DENND1B-201ENST00000235453 CTR9Q6PD62 1173 aa12.29□□□□□ -0.44
DENND1B-201ENST00000235453 RWDD1Q9H446 243 aaPredicted RBP12.29□□□□□ -0.44
DENND1B-201ENST00000235453 LMBRD1Q9NUN5 540 aa12.29□□□□□ -0.44
DENND1B-201ENST00000235453 CTNNA3Q9UI47 895 aa12.29□□□□□ -0.44
DENND1B-201ENST00000235453 RAD50Q92878 1312 aa12.29□□□□□ -0.44
DENND1B-201ENST00000235453 UVSSAQ2YD98 709 aa12.28□□□□□ -0.44
DENND1B-201ENST00000235453 HDAC5Q9UQL6 1122 aa12.28□□□□□ -0.44
DENND1B-201ENST00000235453 ATP10AO60312 1499 aa12.28□□□□□ -0.44
DENND1B-201ENST00000235453 SOX12O15370 315 aa12.28□□□□□ -0.44
DENND1B-201ENST00000235453 CYP2E1P05181 493 aaPredicted RBP12.28□□□□□ -0.44
DENND1B-201ENST00000235453 NPM1P06748 294 aaKnown RBP eCLIP12.28□□□□□ -0.44
DENND1B-201ENST00000235453 NUCB2P80303 420 aa12.28□□□□□ -0.44
DENND1B-201ENST00000235453 FAM53CQ9NYF3 392 aa12.28□□□□□ -0.44
DENND1B-201ENST00000235453 KIDINS220Q9ULH0 1771 aa12.27□□□□□ -0.44
DENND1B-201ENST00000235453 DEPDC5O75140 1603 aa12.27□□□□□ -0.44
DENND1B-201ENST00000235453 K7ELQ4 463 aaPredicted RBP12.27□□□□□ -0.45
DENND1B-201ENST00000235453 COL17A1Q9UMD9 1497 aaPredicted RBP12.27□□□□□ -0.45
DENND1B-201ENST00000235453 ADAMTS8Q9UP79 889 aa12.26□□□□□ -0.45
DENND1B-201ENST00000235453 CLTCL1P53675 1640 aa12.26□□□□□ -0.45
DENND1B-201ENST00000235453 SPHKAPQ2M3C7 1700 aa12.26□□□□□ -0.45
DENND1B-201ENST00000235453 CFAP65Q6ZU64 1925 aaKnown RBP12.26□□□□□ -0.45
DENND1B-201ENST00000235453 UGGT1Q9NYU2 1555 aa12.26□□□□□ -0.45
DENND1B-201ENST00000235453 MROH1Q8NDA8 1641 aa12.25□□□□□ -0.45
DENND1B-201ENST00000235453 TRIM6-TRIM34B2RNG4 842 aa12.25□□□□□ -0.45
DENND1B-201ENST00000235453 SSFA2P28290 1259 aa12.25□□□□□ -0.45
DENND1B-201ENST00000235453 CAVIN1Q6NZI2 390 aaKnown RBP12.25□□□□□ -0.45
DENND1B-201ENST00000235453 TRIM34Q9BYJ4 488 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms