RNA–Protein interactions for RNA: ENST00000225842.3

CCL1-201, Transcript of C-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCL1, Length 592 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1-201ENST00000225842 PTPREP23469 700 aa11.3□□□□□ -0.6
CCL1-201ENST00000225842 UGGT2Q9NYU1 1516 aa11.3□□□□□ -0.6
CCL1-201ENST00000225842 TRIM6-TRIM34B2RNG4 842 aa11.29□□□□□ -0.6
CCL1-201ENST00000225842 GJA5P36382 358 aa11.29□□□□□ -0.6
CCL1-201ENST00000225842 PACS2Q86VP3 889 aa11.29□□□□□ -0.6
CCL1-201ENST00000225842 NEO1Q92859 1461 aa11.28□□□□□ -0.6
CCL1-201ENST00000225842 KDM4AO75164 1064 aa11.28□□□□□ -0.6
CCL1-201ENST00000225842 FANCAO15360 1455 aa11.27□□□□□ -0.6
CCL1-201ENST00000225842 CEBPAP49715 358 aaPredicted RBP11.27□□□□□ -0.61
CCL1-201ENST00000225842 KIAA0556O60303 1618 aa11.27□□□□□ -0.61
CCL1-201ENST00000225842 PTPRTO14522 1441 aa11.26□□□□□ -0.61
CCL1-201ENST00000225842 AKNAQ7Z591 1439 aa11.26□□□□□ -0.61
CCL1-201ENST00000225842 IQSEC2Q5JU85 1478 aa11.26□□□□□ -0.61
CCL1-201ENST00000225842 IRF5Q13568 498 aa11.26□□□□□ -0.61
CCL1-201ENST00000225842 PROX2Q3B8N5 592 aa11.25□□□□□ -0.61
CCL1-201ENST00000225842 PRPF38BQ5VTL8 546 aaKnown RBP11.25□□□□□ -0.61
CCL1-201ENST00000225842 ZBTB3Q9H5J0 574 aa11.25□□□□□ -0.61
CCL1-201ENST00000225842 PSDA5PKW4 1024 aaPredicted RBP11.24□□□□□ -0.61
CCL1-201ENST00000225842 PPP1R15AO75807 674 aaPredicted RBP11.24□□□□□ -0.61
CCL1-201ENST00000225842 FDX1P10109 184 aa11.24□□□□□ -0.61
CCL1-201ENST00000225842 GUCA2AQ02747 115 aa11.24□□□□□ -0.61
CCL1-201ENST00000225842 FAM9AQ8IZU1 332 aaPredicted RBP11.24□□□□□ -0.61
CCL1-201ENST00000225842 GJD4Q96KN9 370 aaPredicted RBP11.24□□□□□ -0.61
CCL1-201ENST00000225842 NDUFB9Q9Y6M9 179 aa11.24□□□□□ -0.61
CCL1-201ENST00000225842 UHRF1BP1Q6BDS2 1440 aa11.24□□□□□ -0.61
CCL1-201ENST00000225842 ARHGEF40Q8TER5 1519 aa11.24□□□□□ -0.61
CCL1-201ENST00000225842 FRMPD1Q5SYB0 1578 aa11.24□□□□□ -0.61
CCL1-201ENST00000225842 HOXA2O43364 376 aa11.23□□□□□ -0.61
CCL1-201ENST00000225842 POTEJP0CG39 1038 aa11.23□□□□□ -0.61
CCL1-201ENST00000225842 HLA-CQ95604 372 aa11.23□□□□□ -0.61
CCL1-201ENST00000225842 ACIN1Q9UKV3 1341 aaKnown RBP11.23□□□□□ -0.61
CCL1-201ENST00000225842 DENND4BO75064 1496 aaPredicted RBP11.23□□□□□ -0.61
CCL1-201ENST00000225842 LTBP4Q8N2S1 1624 aa11.23□□□□□ -0.61
CCL1-201ENST00000225842 ABCA8O94911 1581 aa11.22□□□□□ -0.61
CCL1-201ENST00000225842 GCGRP47871 477 aa11.22□□□□□ -0.61
CCL1-201ENST00000225842 HDGFL1Q5TGJ6 251 aa11.22□□□□□ -0.61
CCL1-201ENST00000225842 HMX1Q9NP08 348 aaPredicted RBP11.22□□□□□ -0.61
CCL1-201ENST00000225842 USP46P62068 366 aa11.21□□□□□ -0.61
CCL1-201ENST00000225842 CTDSPL2Q05D32 466 aa11.21□□□□□ -0.61
CCL1-201ENST00000225842 TSC1Q92574 1164 aa11.21□□□□□ -0.61
CCL1-201ENST00000225842 PCDHGC3Q9UN70 934 aa11.21□□□□□ -0.61
CCL1-201ENST00000225842 RFX1P22670 979 aa11.2□□□□□ -0.62
CCL1-201ENST00000225842 HSPA1LP34931 641 aa11.2□□□□□ -0.62
CCL1-201ENST00000225842 ADAMTS19Q8TE59 1207 aa11.2□□□□□ -0.62
CCL1-201ENST00000225842 KCNK17Q96T54 332 aa11.2□□□□□ -0.62
CCL1-201ENST00000225842 STRCQ7RTU9 1775 aa11.2□□□□□ -0.62
CCL1-201ENST00000225842 TTC37Q6PGP7 1564 aa11.2□□□□□ -0.62
CCL1-201ENST00000225842 ATP10BO94823 1461 aa11.19□□□□□ -0.62
CCL1-201ENST00000225842 FHOD3Q2V2M9 1422 aa11.19□□□□□ -0.62
CCL1-201ENST00000225842 RSPH4AQ5TD94 716 aa11.19□□□□□ -0.62
CCL1-201ENST00000225842 ABCA9Q8IUA7 1624 aa11.19□□□□□ -0.62
CCL1-201ENST00000225842 GOLGA3Q08378 1498 aa11.19□□□□□ -0.62
CCL1-201ENST00000225842 KIAA1468Q9P260 1216 aa11.18□□□□□ -0.62
CCL1-201ENST00000225842 MED1Q15648 1581 aaPredicted RBP11.18□□□□□ -0.62
CCL1-201ENST00000225842 RAPGEF2Q9Y4G8 1499 aa11.18□□□□□ -0.62
CCL1-201ENST00000225842 PREX1Q8TCU6 1659 aa11.17□□□□□ -0.62
CCL1-201ENST00000225842 SLC10A3P09131 477 aa11.17□□□□□ -0.62
CCL1-201ENST00000225842 VAC14Q08AM6 782 aa11.17□□□□□ -0.62
CCL1-201ENST00000225842 LRRN4Q8WUT4 740 aa11.17□□□□□ -0.62
CCL1-201ENST00000225842 TRIM34Q9BYJ4 488 aa11.17□□□□□ -0.62
CCL1-201ENST00000225842 GZF1Q9H116 711 aaPredicted RBP11.17□□□□□ -0.62
CCL1-201ENST00000225842 ZNF335Q9H4Z2 1342 aaPredicted RBP11.16□□□□□ -0.62
CCL1-201ENST00000225842 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.16□□□□□ -0.62
CCL1-201ENST00000225842 PIP4K2BP78356 416 aa11.16□□□□□ -0.62
CCL1-201ENST00000225842 WASHC4Q2M389 1173 aa11.16□□□□□ -0.62
CCL1-201ENST00000225842 SWT1Q5T5J6 900 aaKnown RBP11.16□□□□□ -0.62
CCL1-201ENST00000225842 PBXIP1Q96AQ6 731 aa11.16□□□□□ -0.62
CCL1-201ENST00000225842 ZFYVE16Q7Z3T8 1539 aa11.15□□□□□ -0.62
CCL1-201ENST00000225842 GPR37L1O60883 481 aa11.15□□□□□ -0.62
CCL1-201ENST00000225842 MTMR2Q13614 643 aa11.15□□□□□ -0.62
CCL1-201ENST00000225842 HELBQ8NG08 1087 aaPredicted RBP11.15□□□□□ -0.62
CCL1-201ENST00000225842 EFCAB5A4FU69 1503 aa11.14□□□□□ -0.63
CCL1-201ENST00000225842 MAGI2Q86UL8 1455 aa11.14□□□□□ -0.63
CCL1-201ENST00000225842 ARHGEF12Q9NZN5 1544 aa11.14□□□□□ -0.63
CCL1-201ENST00000225842 POTEB2H3BUK9 544 aa11.13□□□□□ -0.63
CCL1-201ENST00000225842 CFAP70Q5T0N1 1121 aa11.13□□□□□ -0.63
CCL1-201ENST00000225842 TMCO4Q5TGY1 634 aa11.13□□□□□ -0.63
CCL1-201ENST00000225842 FER1L4A9Z1Z3 1794 aa11.13□□□□□ -0.63
CCL1-201ENST00000225842 CFAP99D6REC4 459 aa11.12□□□□□ -0.63
CCL1-201ENST00000225842 PDE4CQ08493 712 aa11.12□□□□□ -0.63
CCL1-201ENST00000225842 EPS8L1Q8TE68 723 aa11.12□□□□□ -0.63
CCL1-201ENST00000225842 NCOA1Q15788 1441 aa11.11□□□□□ -0.63
CCL1-201ENST00000225842 C6orf229H3BNL8 230 aa11.11□□□□□ -0.63
CCL1-201ENST00000225842 ZBED2Q9BTP6 218 aa11.11□□□□□ -0.63
CCL1-201ENST00000225842 ESF1Q9H501 851 aaKnown RBP11.11□□□□□ -0.63
CCL1-201ENST00000225842 SCUBE2Q9NQ36 999 aa11.11□□□□□ -0.63
CCL1-201ENST00000225842 SEPT9Q9UHD8 586 aaPredicted RBP11.11□□□□□ -0.63
CCL1-201ENST00000225842 ZMYM4Q5VZL5 1548 aa11.1□□□□□ -0.63
CCL1-201ENST00000225842 SIGLEC1Q9BZZ2 1709 aa11.1□□□□□ -0.63
CCL1-201ENST00000225842 TOM1O60784 492 aa11.1□□□□□ -0.63
CCL1-201ENST00000225842 SP7Q8TDD2 431 aaPredicted RBP11.1□□□□□ -0.63
CCL1-201ENST00000225842 PPP1R12CQ9BZL4 782 aa11.1□□□□□ -0.63
CCL1-201ENST00000225842 ATP10AO60312 1499 aa11.1□□□□□ -0.63
CCL1-201ENST00000225842 HOXB1P14653 301 aaPredicted RBP11.09□□□□□ -0.63
CCL1-201ENST00000225842 RICTORQ6R327 1708 aa11.09□□□□□ -0.63
CCL1-201ENST00000225842 C9orf84Q5VXU9 1444 aa11.09□□□□□ -0.63
CCL1-201ENST00000225842 CARNS1A5YM72 827 aa11.08□□□□□ -0.64
CCL1-201ENST00000225842 PLEKHD1A6NEE1 506 aa11.08□□□□□ -0.64
CCL1-201ENST00000225842 CSB-PGBD3P0DP91 1061 aa11.08□□□□□ -0.64
CCL1-201ENST00000225842 PSEN2P49810 448 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms