RNA–Protein interactions for RNA: ENSMUST00000175975.8

Cux1-204, Transcript of Homeobox protein cut-like 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Cux1, Length 10,945 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1-204ENSMUST00000175975 Fam184aE9PW83 1143 aa13.6□□□□□ -0.23
Cux1-204ENSMUST00000175975 Zkscan2G3X952 960 aa13.6□□□□□ -0.23
Cux1-204ENSMUST00000175975 Sv2bQ8BG39 683 aa13.6□□□□□ -0.23
Cux1-204ENSMUST00000175975 LarsQ8BMJ2 1178 aa13.6□□□□□ -0.23
Cux1-204ENSMUST00000175975 Gm21190A0A0G2JGJ6 266 aa13.6□□□□□ -0.23
Cux1-204ENSMUST00000175975 L1td1Q587J6 782 aaKnown RBP13.6□□□□□ -0.23
Cux1-204ENSMUST00000175975 Ripk4Q9ERK0 786 aa13.6□□□□□ -0.23
Cux1-204ENSMUST00000175975 Ccdc181Q80ZU5 509 aa13.59□□□□□ -0.23
Cux1-204ENSMUST00000175975 Acbd3Q8BMP6 525 aa13.59□□□□□ -0.23
Cux1-204ENSMUST00000175975 Riok1Q922Q2 567 aa13.59□□□□□ -0.23
Cux1-204ENSMUST00000175975 Pafah1b1P63005 410 aaKnown RBP13.59□□□□□ -0.23
Cux1-204ENSMUST00000175975 Usp48Q3V0C5 1052 aa13.59□□□□□ -0.23
Cux1-204ENSMUST00000175975 PsapQ61207 557 aaKnown RBP13.59□□□□□ -0.23
Cux1-204ENSMUST00000175975 Ctage5Q8R311 779 aa13.59□□□□□ -0.23
Cux1-204ENSMUST00000175975 Ccdc172Q810N9 267 aa13.59□□□□□ -0.23
Cux1-204ENSMUST00000175975 Cttnbp2B9EJA2 1648 aa13.59□□□□□ -0.23
Cux1-204ENSMUST00000175975 AcrbpQ3V140 540 aa13.59□□□□□ -0.23
Cux1-204ENSMUST00000175975 Stk38Q91VJ4 465 aa13.59□□□□□ -0.23
Cux1-204ENSMUST00000175975 Ccdc88bQ4QRL3 1481 aa13.59□□□□□ -0.23
Cux1-204ENSMUST00000175975 Gigyf2Q6Y7W8 1291 aaKnown RBP13.59□□□□□ -0.23
Cux1-204ENSMUST00000175975 TefQ9JLC6 301 aa13.59□□□□□ -0.23
Cux1-204ENSMUST00000175975 Sf3b2Q3UJB0 878 aaKnown RBP13.58□□□□□ -0.23
Cux1-204ENSMUST00000175975 Gsto1O09131 240 aa13.58□□□□□ -0.23
Cux1-204ENSMUST00000175975 Smc1aQ9CU62 1233 aaKnown RBP13.58□□□□□ -0.24
Cux1-204ENSMUST00000175975 Dhx29Q6PGC1 1365 aaKnown RBP13.58□□□□□ -0.24
Cux1-204ENSMUST00000175975 Rfx1P48377 963 aa13.58□□□□□ -0.24
Cux1-204ENSMUST00000175975 Smg7Q5RJH6 1138 aaKnown RBP13.58□□□□□ -0.24
Cux1-204ENSMUST00000175975 Fan1Q69ZT1 1020 aa13.58□□□□□ -0.24
Cux1-204ENSMUST00000175975 Cyp46a1Q9WVK8 500 aa13.58□□□□□ -0.24
Cux1-204ENSMUST00000175975 Sdccag8Q80UF4 717 aa13.58□□□□□ -0.24
Cux1-204ENSMUST00000175975 Trap1aP19473 224 aa13.57□□□□□ -0.24
Cux1-204ENSMUST00000175975 Plekhh1Q80TI1 1356 aa13.57□□□□□ -0.24
Cux1-204ENSMUST00000175975 Tspyl3Q3UYP3 334 aa13.57□□□□□ -0.24
Cux1-204ENSMUST00000175975 IqcgQ80W32 419 aa13.57□□□□□ -0.24
Cux1-204ENSMUST00000175975 Ric3Q8BPM6 367 aa13.57□□□□□ -0.24
Cux1-204ENSMUST00000175975 Otud6bQ8K2H2 294 aa13.57□□□□□ -0.24
Cux1-204ENSMUST00000175975 Stard3nlQ9DCI3 235 aa13.57□□□□□ -0.24
Cux1-204ENSMUST00000175975 CenphQ9QYM8 241 aa13.57□□□□□ -0.24
Cux1-204ENSMUST00000175975 Sh2d4bA6X942 431 aa13.56□□□□□ -0.24
Cux1-204ENSMUST00000175975 Washc4Q3UMB9 1173 aa13.56□□□□□ -0.24
Cux1-204ENSMUST00000175975 Kcnh8P59111 1102 aa13.56□□□□□ -0.24
Cux1-204ENSMUST00000175975 Q9D2X8 372 aa13.56□□□□□ -0.24
Cux1-204ENSMUST00000175975 Gcc1Q9D4H2 778 aa13.56□□□□□ -0.24
Cux1-204ENSMUST00000175975 MvpQ9EQK5 861 aa13.56□□□□□ -0.24
Cux1-204ENSMUST00000175975 Nsd2Q8BVE8 1365 aa13.56□□□□□ -0.24
Cux1-204ENSMUST00000175975 Zscan20B2KFW1 1030 aa13.55□□□□□ -0.24
Cux1-204ENSMUST00000175975 Arid3cA6PWV5 409 aa13.55□□□□□ -0.24
Cux1-204ENSMUST00000175975 Apol7aB2RT54 418 aa13.55□□□□□ -0.24
Cux1-204ENSMUST00000175975 Trim34bJ3QNR8 485 aa13.55□□□□□ -0.24
Cux1-204ENSMUST00000175975 SkilQ60665 675 aa13.55□□□□□ -0.24
Cux1-204ENSMUST00000175975 Fam13bQ8K2H3 851 aa13.55□□□□□ -0.24
Cux1-204ENSMUST00000175975 Hmgb3O54879 200 aaKnown RBP13.55□□□□□ -0.24
Cux1-204ENSMUST00000175975 Naa15Q80UM3 865 aaKnown RBP13.55□□□□□ -0.24
Cux1-204ENSMUST00000175975 Ccdc39Q9D5Y1 937 aa13.55□□□□□ -0.24
Cux1-204ENSMUST00000175975 ClasrpQ8CFC7 668 aa13.55□□□□□ -0.24
Cux1-204ENSMUST00000175975 4921504E06RikQ8CET2 560 aa13.55□□□□□ -0.24
Cux1-204ENSMUST00000175975 Usp47Q8BY87 1376 aa13.55□□□□□ -0.24
Cux1-204ENSMUST00000175975 Cfdp1O88271 295 aaKnown RBP13.54□□□□□ -0.24
Cux1-204ENSMUST00000175975 Ttll5Q8CHB8 1328 aa13.54□□□□□ -0.24
Cux1-204ENSMUST00000175975 ErbinQ80TH2 1402 aa13.54□□□□□ -0.24
Cux1-204ENSMUST00000175975 Rbm5Q91YE7 815 aaKnown RBP13.54□□□□□ -0.24
Cux1-204ENSMUST00000175975 Swt1Q9DBQ9 907 aa13.54□□□□□ -0.24
Cux1-204ENSMUST00000175975 TnmdQ9EP64 317 aa13.54□□□□□ -0.24
Cux1-204ENSMUST00000175975 Zkscan1Q8BGS3 561 aaKnown RBP13.54□□□□□ -0.24
Cux1-204ENSMUST00000175975 Dydc1Q9D9T0 175 aa13.54□□□□□ -0.24
Cux1-204ENSMUST00000175975 Cep162Q6ZQ06 1403 aa13.54□□□□□ -0.24
Cux1-204ENSMUST00000175975 Pknox2Q8BG99 474 aa13.54□□□□□ -0.24
Cux1-204ENSMUST00000175975 Vps36Q91XD6 386 aa13.54□□□□□ -0.24
Cux1-204ENSMUST00000175975 Eif5P59325 429 aaKnown RBP13.53□□□□□ -0.24
Cux1-204ENSMUST00000175975 Krt85Q9Z2T6 507 aa13.53□□□□□ -0.24
Cux1-204ENSMUST00000175975 Gm10471E9Q1C7 252 aa13.53□□□□□ -0.24
Cux1-204ENSMUST00000175975 Ncapg2Q6DFV1 1138 aa13.53□□□□□ -0.24
Cux1-204ENSMUST00000175975 Q9D9S1 216 aa13.53□□□□□ -0.24
Cux1-204ENSMUST00000175975 Cfap58B2RW38 873 aa13.53□□□□□ -0.24
Cux1-204ENSMUST00000175975 Ssr1Q9CY50 286 aaKnown RBP13.53□□□□□ -0.24
Cux1-204ENSMUST00000175975 Fbf1A2A870 1173 aa13.53□□□□□ -0.24
Cux1-204ENSMUST00000175975 Hmox1P14901 289 aa13.53□□□□□ -0.24
Cux1-204ENSMUST00000175975 Cnksr2Q80YA9 1032 aa13.53□□□□□ -0.24
Cux1-204ENSMUST00000175975 Rnf214Q8BFU3 668 aaKnown RBP13.53□□□□□ -0.24
Cux1-204ENSMUST00000175975 Kcnn1Q9EQR3 537 aa13.53□□□□□ -0.24
Cux1-204ENSMUST00000175975 Cdr1E9Q0B4 517 aa13.53□□□□□ -0.24
Cux1-204ENSMUST00000175975 SlmapQ3URD3 845 aa13.53□□□□□ -0.24
Cux1-204ENSMUST00000175975 Cdc45Q9Z1X9 566 aa13.53□□□□□ -0.24
Cux1-204ENSMUST00000175975 Clul1Q3ZRW6 464 aa13.52□□□□□ -0.24
Cux1-204ENSMUST00000175975 GlmnQ8BZM1 596 aa13.52□□□□□ -0.24
Cux1-204ENSMUST00000175975 Ttc5Q99LG4 440 aa13.52□□□□□ -0.24
Cux1-204ENSMUST00000175975 Pmfbp1Q9WVQ0 1022 aa13.52□□□□□ -0.24
Cux1-204ENSMUST00000175975 Hs1bp3Q3TC93 395 aa13.52□□□□□ -0.24
Cux1-204ENSMUST00000175975 Kiaa1524Q8BWY9 907 aa13.52□□□□□ -0.24
Cux1-204ENSMUST00000175975 Vps37dQ810I0 261 aa13.52□□□□□ -0.24
Cux1-204ENSMUST00000175975 Cep57l1Q8VDS7 400 aa13.52□□□□□ -0.24
Cux1-204ENSMUST00000175975 Usp16Q99LG0 825 aa13.52□□□□□ -0.24
Cux1-204ENSMUST00000175975 Tmco5aQ9D9D5 303 aa13.52□□□□□ -0.24
Cux1-204ENSMUST00000175975 ZgpatQ8VDM1 511 aa13.52□□□□□ -0.25
Cux1-204ENSMUST00000175975 Triml2E9PW10 424 aa13.52□□□□□ -0.25
Cux1-204ENSMUST00000175975 Tsg101Q61187 391 aa13.52□□□□□ -0.25
Cux1-204ENSMUST00000175975 Gimap6Q8K349 305 aa13.52□□□□□ -0.25
Cux1-204ENSMUST00000175975 Calml4Q91WQ9 153 aa13.52□□□□□ -0.25
Cux1-204ENSMUST00000175975 Phf14Q9D4H9 881 aa13.52□□□□□ -0.25
Cux1-204ENSMUST00000175975 Wdhd1P59328 1117 aa13.52□□□□□ -0.25
Retrieved 100 of 22,080 RNA–protein pairs in 26.6 ms