RNA–Protein interactions for RNA: ENSMUST00000174592.7

Ccdc28a-205, Transcript of Coiled-coil domain-containing 28A, mousemouse

TSL 5 BASIC

Gene Ccdc28a, Length 882 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28a-205ENSMUST00000174592 Abca15E9PWH4 1668 aa13.44□□□□□ -0.26
Ccdc28a-205ENSMUST00000174592 Igf2rQ07113 2483 aaKnown RBP13.44□□□□□ -0.26
Ccdc28a-205ENSMUST00000174592 Ccdc85cE9Q6B2 420 aa13.44□□□□□ -0.26
Ccdc28a-205ENSMUST00000174592 Slc35g1Q8BY79 368 aa13.44□□□□□ -0.26
Ccdc28a-205ENSMUST00000174592 Rab3gap2Q8BMG7 1366 aa13.44□□□□□ -0.26
Ccdc28a-205ENSMUST00000174592 Ncapd2Q8K2Z4 1392 aa13.44□□□□□ -0.26
Ccdc28a-205ENSMUST00000174592 Mia2Q91ZV0 1396 aa13.44□□□□□ -0.26
Ccdc28a-205ENSMUST00000174592 Srpk2O54781 681 aaKnown RBP13.43□□□□□ -0.26
Ccdc28a-205ENSMUST00000174592 Kdm2aP59997 1161 aa13.43□□□□□ -0.26
Ccdc28a-205ENSMUST00000174592 Fan1Q69ZT1 1020 aa13.43□□□□□ -0.26
Ccdc28a-205ENSMUST00000174592 Mier1Q5UAK0 511 aa13.42□□□□□ -0.26
Ccdc28a-205ENSMUST00000174592 Zeb2Q9R0G7 1215 aa13.42□□□□□ -0.26
Ccdc28a-205ENSMUST00000174592 PaskQ8CEE6 1383 aa13.42□□□□□ -0.26
Ccdc28a-205ENSMUST00000174592 Col16a1Q8BLX7 1580 aa13.41□□□□□ -0.26
Ccdc28a-205ENSMUST00000174592 Cep170bQ80U49 1574 aa13.41□□□□□ -0.26
Ccdc28a-205ENSMUST00000174592 GalcP54818 684 aa13.4□□□□□ -0.26
Ccdc28a-205ENSMUST00000174592 Rnf180Q3U827 592 aa13.4□□□□□ -0.26
Ccdc28a-205ENSMUST00000174592 Atp2b2Q9R0K7 1198 aa13.4□□□□□ -0.26
Ccdc28a-205ENSMUST00000174592 Vars2Q3U2A8 1060 aa13.39□□□□□ -0.27
Ccdc28a-205ENSMUST00000174592 Dzip1Q8BMD2 852 aa13.39□□□□□ -0.27
Ccdc28a-205ENSMUST00000174592 Pard3Q99NH2 1333 aa13.39□□□□□ -0.27
Ccdc28a-205ENSMUST00000174592 UbtfP25976 765 aaKnown RBP13.38□□□□□ -0.27
Ccdc28a-205ENSMUST00000174592 Puf60Q3UEB3 564 aaKnown RBP13.38□□□□□ -0.27
Ccdc28a-205ENSMUST00000174592 Znf316Q6PGE4 1016 aa13.38□□□□□ -0.27
Ccdc28a-205ENSMUST00000174592 Egfem1Q8C088 590 aa13.38□□□□□ -0.27
Ccdc28a-205ENSMUST00000174592 Zcrb1Q9CZ96 217 aaKnown RBP13.38□□□□□ -0.27
Ccdc28a-205ENSMUST00000174592 TimelessQ9R1X4 1197 aa13.38□□□□□ -0.27
Ccdc28a-205ENSMUST00000174592 Mphosph9A6H5Y1 991 aa13.37□□□□□ -0.27
Ccdc28a-205ENSMUST00000174592 Fer1l6E0CZ42 1862 aa13.36□□□□□ -0.27
Ccdc28a-205ENSMUST00000174592 Lrp5Q91VN0 1614 aa13.36□□□□□ -0.27
Ccdc28a-205ENSMUST00000174592 Mink1Q9JM52 1308 aa13.36□□□□□ -0.27
Ccdc28a-205ENSMUST00000174592 Gm21698A0A087WQP8 267 aa13.35□□□□□ -0.27
Ccdc28a-205ENSMUST00000174592 Gm21671G3UY31 267 aa13.35□□□□□ -0.27
Ccdc28a-205ENSMUST00000174592 Card11Q8CIS0 1159 aa13.35□□□□□ -0.27
Ccdc28a-205ENSMUST00000174592 Snapc4Q8BP86 1333 aa13.35□□□□□ -0.27
Ccdc28a-205ENSMUST00000174592 Gm20521D3Z5F7 333 aa13.34□□□□□ -0.27
Ccdc28a-205ENSMUST00000174592 IqubQ8CDK3 788 aa13.34□□□□□ -0.27
Ccdc28a-205ENSMUST00000174592 Nid2O88322 1403 aa13.33□□□□□ -0.28
Ccdc28a-205ENSMUST00000174592 Lrit1Q8K099 624 aa13.33□□□□□ -0.28
Ccdc28a-205ENSMUST00000174592 Bcl9lQ67FY2 1494 aa13.33□□□□□ -0.28
Ccdc28a-205ENSMUST00000174592 Washc2Q6PGL7 1334 aa13.33□□□□□ -0.28
Ccdc28a-205ENSMUST00000174592 Mug2P28666 1451 aa13.32□□□□□ -0.28
Ccdc28a-205ENSMUST00000174592 Lrrc7Q80TE7 1490 aa13.32□□□□□ -0.28
Ccdc28a-205ENSMUST00000174592 GakQ99KY4 1305 aa13.32□□□□□ -0.28
Ccdc28a-205ENSMUST00000174592 Slx1bQ8BX32 270 aa13.31□□□□□ -0.28
Ccdc28a-205ENSMUST00000174592 Nckap5lQ6GQX2 1323 aa13.31□□□□□ -0.28
Ccdc28a-205ENSMUST00000174592 Ppfibp2O35711 882 aa13.3□□□□□ -0.28
Ccdc28a-205ENSMUST00000174592 Hoxd11P23813 323 aa13.3□□□□□ -0.28
Ccdc28a-205ENSMUST00000174592 Pim2Q62070 370 aa13.3□□□□□ -0.28
Ccdc28a-205ENSMUST00000174592 Trpc5Q9QX29 975 aa13.3□□□□□ -0.28
Ccdc28a-205ENSMUST00000174592 Mast2Q60592 1734 aa13.3□□□□□ -0.28
Ccdc28a-205ENSMUST00000174592 Ifit1bl1D3Z6F0 470 aa13.29□□□□□ -0.28
Ccdc28a-205ENSMUST00000174592 Stag3O70576 1240 aa13.29□□□□□ -0.28
Ccdc28a-205ENSMUST00000174592 Sbno1Q689Z5 1390 aa13.29□□□□□ -0.28
Ccdc28a-205ENSMUST00000174592 Pkd2O35245 966 aa13.28□□□□□ -0.28
Ccdc28a-205ENSMUST00000174592 Vps33bP59016 617 aa13.28□□□□□ -0.28
Ccdc28a-205ENSMUST00000174592 Sgip1Q8VD37 806 aa13.28□□□□□ -0.28
Ccdc28a-205ENSMUST00000174592 Gimap6Q8K349 305 aa13.27□□□□□ -0.29
Ccdc28a-205ENSMUST00000174592 Erbb3Q61526 1339 aa13.27□□□□□ -0.29
Ccdc28a-205ENSMUST00000174592 Dot1lQ6XZL8 1540 aa13.27□□□□□ -0.29
Ccdc28a-205ENSMUST00000174592 Kif23E9Q5G3 953 aa13.26□□□□□ -0.29
Ccdc28a-205ENSMUST00000174592 Ddb1Q3U1J4 1140 aaKnown RBP13.26□□□□□ -0.29
Ccdc28a-205ENSMUST00000174592 Ankrd23Q812A3 306 aa13.26□□□□□ -0.29
Ccdc28a-205ENSMUST00000174592 Hirip3Q8BLH7 601 aa13.26□□□□□ -0.29
Ccdc28a-205ENSMUST00000174592 Tulp4Q9JIL5 1547 aa13.26□□□□□ -0.29
Ccdc28a-205ENSMUST00000174592 Socs7Q8VHQ2 579 aa13.25□□□□□ -0.29
Ccdc28a-205ENSMUST00000174592 Fam122aQ9DB52 284 aa13.25□□□□□ -0.29
Ccdc28a-205ENSMUST00000174592 Cdk19Q8BWD8 501 aa13.23□□□□□ -0.29
Ccdc28a-205ENSMUST00000174592 Abca14E9Q8F8 1683 aa13.23□□□□□ -0.29
Ccdc28a-205ENSMUST00000174592 Card10P58660 1021 aa13.22□□□□□ -0.29
Ccdc28a-205ENSMUST00000174592 Fchsd2Q3USJ8 740 aa13.22□□□□□ -0.29
Ccdc28a-205ENSMUST00000174592 Mdc1Q5PSV9 1707 aa13.22□□□□□ -0.29
Ccdc28a-205ENSMUST00000174592 AtrnQ9WU60 1428 aa13.22□□□□□ -0.29
Ccdc28a-205ENSMUST00000174592 Rad23bP54728 416 aa13.21□□□□□ -0.29
Ccdc28a-205ENSMUST00000174592 Fam184bQ0KK56 942 aa13.21□□□□□ -0.29
Ccdc28a-205ENSMUST00000174592 Amotl2Q8K371 772 aa13.21□□□□□ -0.29
Ccdc28a-205ENSMUST00000174592 Uhrf1bp1lA2RSJ4 1457 aa13.21□□□□□ -0.3
Ccdc28a-205ENSMUST00000174592 Tet3Q8BG87 1668 aa13.21□□□□□ -0.3
Ccdc28a-205ENSMUST00000174592 Kat6bQ8BRB7 1872 aa13.21□□□□□ -0.3
Ccdc28a-205ENSMUST00000174592 Nwd2Q6P5U7 1742 aa13.2□□□□□ -0.3
Ccdc28a-205ENSMUST00000174592 CatipB9EKE5 520 aa13.2□□□□□ -0.3
Ccdc28a-205ENSMUST00000174592 Q8BT18 775 aa13.2□□□□□ -0.3
Ccdc28a-205ENSMUST00000174592 Ciz1Q8VEH2 845 aa13.2□□□□□ -0.3
Ccdc28a-205ENSMUST00000174592 Frmpd2A0A140LI67 1392 aa13.2□□□□□ -0.3
Ccdc28a-205ENSMUST00000174592 Arhgap33Q80YF9 1305 aa13.19□□□□□ -0.3
Ccdc28a-205ENSMUST00000174592 Gpr162Q3UN16 588 aa13.19□□□□□ -0.3
Ccdc28a-205ENSMUST00000174592 Ginm1Q91WR6 327 aa13.19□□□□□ -0.3
Ccdc28a-205ENSMUST00000174592 Akt1s1Q9D1F4 257 aa13.19□□□□□ -0.3
Ccdc28a-205ENSMUST00000174592 IncenpQ9WU62 880 aa13.19□□□□□ -0.3
Ccdc28a-205ENSMUST00000174592 Nsd3Q6P2L6 1439 aa13.19□□□□□ -0.3
Ccdc28a-205ENSMUST00000174592 Mon2Q80TL7 1715 aa13.19□□□□□ -0.3
Ccdc28a-205ENSMUST00000174592 Prdm10Q3UTQ7 1184 aa13.18□□□□□ -0.3
Ccdc28a-205ENSMUST00000174592 Ppm1fQ8CGA0 452 aa13.18□□□□□ -0.3
Ccdc28a-205ENSMUST00000174592 Rock1P70335 1354 aa13.18□□□□□ -0.3
Ccdc28a-205ENSMUST00000174592 Ncoa4Q5U4H9 625 aa13.17□□□□□ -0.3
Ccdc28a-205ENSMUST00000174592 Ankrd13dQ6PD24 605 aa13.17□□□□□ -0.3
Ccdc28a-205ENSMUST00000174592 Bsdc1Q80Y55 427 aa13.17□□□□□ -0.3
Ccdc28a-205ENSMUST00000174592 Usp40Q8BWR4 1235 aa13.17□□□□□ -0.3
Ccdc28a-205ENSMUST00000174592 Tnrc6bQ8BKI2 1810 aaKnown RBP13.16□□□□□ -0.3
Ccdc28a-205ENSMUST00000174592 Exoc5Q3TPX4 708 aa13.16□□□□□ -0.3
Retrieved 100 of 22,080 RNA–protein pairs in 24.2 ms