RNA–Protein interactions for RNA: ENSMUST00000168967.8

Pdlim5-204, Transcript of PDZ and LIM domain protein 5, mousemouse

TSL 1 (best) BASIC

Gene Pdlim5, Length 1,755 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5-204ENSMUST00000168967 Smpd1Q04519 627 aa13.39□□□□□ -0.27
Pdlim5-204ENSMUST00000168967 Rpgrip1lQ8CG73 1264 aa13.39□□□□□ -0.27
Pdlim5-204ENSMUST00000168967 Ccdc96Q9CR92 584 aa13.39□□□□□ -0.27
Pdlim5-204ENSMUST00000168967 Nup155Q99P88 1391 aaKnown RBP13.39□□□□□ -0.27
Pdlim5-204ENSMUST00000168967 Mlh3A0A1Y7VMP7 1443 aa13.39□□□□□ -0.27
Pdlim5-204ENSMUST00000168967 Caskin1Q6P9K8 1431 aa13.39□□□□□ -0.27
Pdlim5-204ENSMUST00000168967 Nkx1-2P42580 305 aa13.37□□□□□ -0.27
Pdlim5-204ENSMUST00000168967 ElnP54320 860 aa13.37□□□□□ -0.27
Pdlim5-204ENSMUST00000168967 Rccd1Q8BTU7 377 aa13.37□□□□□ -0.27
Pdlim5-204ENSMUST00000168967 Kdm5cP41230 1554 aa13.37□□□□□ -0.27
Pdlim5-204ENSMUST00000168967 Mapkbp1Q6NS57 1503 aa13.37□□□□□ -0.27
Pdlim5-204ENSMUST00000168967 Clasp1Q80TV8 1535 aaKnown RBP13.37□□□□□ -0.27
Pdlim5-204ENSMUST00000168967 Rbm46P86049 533 aa13.37□□□□□ -0.27
Pdlim5-204ENSMUST00000168967 Mre11Q61216 706 aa13.37□□□□□ -0.27
Pdlim5-204ENSMUST00000168967 PxdnQ3UQ28 1475 aa13.36□□□□□ -0.27
Pdlim5-204ENSMUST00000168967 Fkbp15Q6P9Q6 1216 aaKnown RBP13.36□□□□□ -0.27
Pdlim5-204ENSMUST00000168967 Trak1Q6PD31 939 aa13.36□□□□□ -0.27
Pdlim5-204ENSMUST00000168967 Ms4a4cQ9D3F6 226 aa13.36□□□□□ -0.27
Pdlim5-204ENSMUST00000168967 SmapQ9R0P4 181 aaKnown RBP13.36□□□□□ -0.27
Pdlim5-204ENSMUST00000168967 Abca16E9PWJ7 1678 aa13.36□□□□□ -0.27
Pdlim5-204ENSMUST00000168967 Fgd1P52734 960 aa13.35□□□□□ -0.27
Pdlim5-204ENSMUST00000168967 Gpc1Q9QZF2 557 aa13.35□□□□□ -0.27
Pdlim5-204ENSMUST00000168967 PtprgQ05909 1442 aa13.35□□□□□ -0.27
Pdlim5-204ENSMUST00000168967 Brpf1B2RRD7 1212 aa13.35□□□□□ -0.27
Pdlim5-204ENSMUST00000168967 4933416C03RikQ3V063 378 aa13.34□□□□□ -0.27
Pdlim5-204ENSMUST00000168967 Ppm1gQ61074 542 aa13.34□□□□□ -0.27
Pdlim5-204ENSMUST00000168967 Emid1Q91VF5 444 aa13.34□□□□□ -0.27
Pdlim5-204ENSMUST00000168967 EspnQ9ET47 871 aa13.34□□□□□ -0.27
Pdlim5-204ENSMUST00000168967 Fmn2Q9JL04 1578 aa13.33□□□□□ -0.27
Pdlim5-204ENSMUST00000168967 Dot1lQ6XZL8 1540 aa13.33□□□□□ -0.28
Pdlim5-204ENSMUST00000168967 Wdr44Q6NVE8 915 aa13.33□□□□□ -0.28
Pdlim5-204ENSMUST00000168967 Ano8Q6PB70 1060 aa13.33□□□□□ -0.28
Pdlim5-204ENSMUST00000168967 Kdm2bQ6P1G2 1309 aa13.33□□□□□ -0.28
Pdlim5-204ENSMUST00000168967 Tex14Q7M6U3 1450 aa13.32□□□□□ -0.28
Pdlim5-204ENSMUST00000168967 Adgrl2Q8JZZ7 1487 aa13.32□□□□□ -0.28
Pdlim5-204ENSMUST00000168967 DaxxO35613 739 aa13.32□□□□□ -0.28
Pdlim5-204ENSMUST00000168967 Lhx8O35652 367 aa13.32□□□□□ -0.28
Pdlim5-204ENSMUST00000168967 TsksO54887 585 aa13.32□□□□□ -0.28
Pdlim5-204ENSMUST00000168967 Clstn2Q9ER65 966 aa13.32□□□□□ -0.28
Pdlim5-204ENSMUST00000168967 Rrbp1Q99PL5 1605 aaKnown RBP13.32□□□□□ -0.28
Pdlim5-204ENSMUST00000168967 Clcn1Q64347 994 aa13.32□□□□□ -0.28
Pdlim5-204ENSMUST00000168967 Fgd6Q69ZL1 1399 aa13.31□□□□□ -0.28
Pdlim5-204ENSMUST00000168967 Plch2A2AP18 1501 aa13.31□□□□□ -0.28
Pdlim5-204ENSMUST00000168967 Magi1Q6RHR9 1471 aa13.31□□□□□ -0.28
Pdlim5-204ENSMUST00000168967 Gm14025A2AP89 1413 aa13.31□□□□□ -0.28
Pdlim5-204ENSMUST00000168967 CanxP35564 591 aaKnown RBP13.31□□□□□ -0.28
Pdlim5-204ENSMUST00000168967 NppbP40753 121 aa13.31□□□□□ -0.28
Pdlim5-204ENSMUST00000168967 MarsQ68FL6 902 aaKnown RBP13.31□□□□□ -0.28
Pdlim5-204ENSMUST00000168967 Tmc1Q8R4P5 757 aa13.31□□□□□ -0.28
Pdlim5-204ENSMUST00000168967 Ppip5k1A2ARP1 1436 aa13.3□□□□□ -0.28
Pdlim5-204ENSMUST00000168967 OatP29758 439 aa13.3□□□□□ -0.28
Pdlim5-204ENSMUST00000168967 Dnai1Q8C0M8 701 aa13.3□□□□□ -0.28
Pdlim5-204ENSMUST00000168967 Kcnc4Q8R1C0 628 aa13.3□□□□□ -0.28
Pdlim5-204ENSMUST00000168967 Ipo4Q8VI75 1082 aa13.3□□□□□ -0.28
Pdlim5-204ENSMUST00000168967 Atf4Q06507 349 aa13.3□□□□□ -0.28
Pdlim5-204ENSMUST00000168967 Q9CQ90 155 aa13.3□□□□□ -0.28
Pdlim5-204ENSMUST00000168967 Map4P27546 1125 aaKnown RBP13.29□□□□□ -0.28
Pdlim5-204ENSMUST00000168967 Pdlim2Q8R1G6 349 aa13.29□□□□□ -0.28
Pdlim5-204ENSMUST00000168967 Themis2Q91YX0 663 aa13.29□□□□□ -0.28
Pdlim5-204ENSMUST00000168967 Atf7ipQ7TT18 1306 aa13.28□□□□□ -0.28
Pdlim5-204ENSMUST00000168967 Mapk8ip3Q9ESN9 1337 aa13.28□□□□□ -0.28
Pdlim5-204ENSMUST00000168967 Arhgap31A6X8Z5 1425 aa13.28□□□□□ -0.28
Pdlim5-204ENSMUST00000168967 Zcchc11B2RX14 1644 aaKnown RBP13.28□□□□□ -0.28
Pdlim5-204ENSMUST00000168967 AW822073A0A0N4SUK1 652 aa13.28□□□□□ -0.28
Pdlim5-204ENSMUST00000168967 NudcO35685 332 aaKnown RBP13.28□□□□□ -0.28
Pdlim5-204ENSMUST00000168967 Sbno1Q689Z5 1390 aa13.27□□□□□ -0.28
Pdlim5-204ENSMUST00000168967 Lce6aD3YV94 81 aa13.27□□□□□ -0.28
Pdlim5-204ENSMUST00000168967 RragcQ99K70 398 aa13.27□□□□□ -0.28
Pdlim5-204ENSMUST00000168967 Rwdd1Q9CQK7 243 aa13.27□□□□□ -0.28
Pdlim5-204ENSMUST00000168967 AknaQ80VW7 1404 aa13.27□□□□□ -0.28
Pdlim5-204ENSMUST00000168967 Tarbp1E9Q368 1579 aa13.27□□□□□ -0.29
Pdlim5-204ENSMUST00000168967 Lrrc9Q8CDN9 1456 aa13.27□□□□□ -0.29
Pdlim5-204ENSMUST00000168967 Plekhh1Q80TI1 1356 aa13.27□□□□□ -0.29
Pdlim5-204ENSMUST00000168967 Large2Q5XPT3 690 aa13.27□□□□□ -0.29
Pdlim5-204ENSMUST00000168967 Recql4Q75NR7 1216 aaKnown RBP13.27□□□□□ -0.29
Pdlim5-204ENSMUST00000168967 Plcd4Q8K3R3 807 aa13.27□□□□□ -0.29
Pdlim5-204ENSMUST00000168967 Neurl4Q5NCX5 1563 aa13.26□□□□□ -0.29
Pdlim5-204ENSMUST00000168967 Cyp8b1O88962 500 aa13.26□□□□□ -0.29
Pdlim5-204ENSMUST00000168967 Q7TT23 1179 aa13.26□□□□□ -0.29
Pdlim5-204ENSMUST00000168967 AampJ3QN89 436 aa13.25□□□□□ -0.29
Pdlim5-204ENSMUST00000168967 Kif16bB1AVY7 1312 aa13.25□□□□□ -0.29
Pdlim5-204ENSMUST00000168967 Slc27a5Q4LDG0 689 aa13.25□□□□□ -0.29
Pdlim5-204ENSMUST00000168967 Setdb2Q8C267 713 aa13.25□□□□□ -0.29
Pdlim5-204ENSMUST00000168967 Map2k7Q8CE90 535 aa13.25□□□□□ -0.29
Pdlim5-204ENSMUST00000168967 PrxO55103 1391 aa13.24□□□□□ -0.29
Pdlim5-204ENSMUST00000168967 Sart3Q9JLI8 962 aaKnown RBP13.24□□□□□ -0.29
Pdlim5-204ENSMUST00000168967 Smc5Q8CG46 1101 aaKnown RBP13.23□□□□□ -0.29
Pdlim5-204ENSMUST00000168967 Trim32Q8CH72 655 aa13.23□□□□□ -0.29
Pdlim5-204ENSMUST00000168967 Adgrl3Q80TS3 1537 aa13.23□□□□□ -0.29
Pdlim5-204ENSMUST00000168967 Abcc2Q8VI47 1543 aa13.23□□□□□ -0.29
Pdlim5-204ENSMUST00000168967 Cep170Q6A065 1588 aa13.23□□□□□ -0.29
Pdlim5-204ENSMUST00000168967 Mast1Q9R1L5 1570 aa13.23□□□□□ -0.29
Pdlim5-204ENSMUST00000168967 Tmf1B9EKI3 1091 aa13.22□□□□□ -0.29
Pdlim5-204ENSMUST00000168967 Pank3Q8R2W9 370 aa13.22□□□□□ -0.29
Pdlim5-204ENSMUST00000168967 Chmp5Q9D7S9 219 aa13.22□□□□□ -0.29
Pdlim5-204ENSMUST00000168967 Abcc1O35379 1528 aa13.22□□□□□ -0.29
Pdlim5-204ENSMUST00000168967 Zscan10Q3URR7 782 aa13.22□□□□□ -0.29
Pdlim5-204ENSMUST00000168967 Speer3W4VSP1 261 aa13.22□□□□□ -0.29
Pdlim5-204ENSMUST00000168967 Tdrd9Q14BI7 1383 aa13.21□□□□□ -0.29
Pdlim5-204ENSMUST00000168967 Fam160a1Q505K2 1081 aa13.21□□□□□ -0.29
Retrieved 100 of 22,080 RNA–protein pairs in 45.3 ms