RNA–Protein interactions for RNA: ENSMUST00000112874.3

Nck1-201, Transcript of Cytoplasmic protein NCK1, mousemouse

TSL 1 (best) BASIC

Gene Nck1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nck1-201ENSMUST00000112874 Pabpn1Q8CCS6 302 aaKnown RBP8.32□□□□□ -1.08
Nck1-201ENSMUST00000112874 CrebrfQ8CDG5 640 aaKnown RBP8.32□□□□□ -1.08
Nck1-201ENSMUST00000112874 HdlbpQ8VDJ3 1268 aaKnown RBP8.32□□□□□ -1.08
Nck1-201ENSMUST00000112874 Smc3Q9CW03 1217 aaKnown RBP8.32□□□□□ -1.08
Nck1-201ENSMUST00000112874 4933428M09RikQ9D3X3 192 aa8.32□□□□□ -1.08
Nck1-201ENSMUST00000112874 Rad51ap2G3UW63 976 aa8.31□□□□□ -1.08
Nck1-201ENSMUST00000112874 Kif1cO35071 1100 aaKnown RBP8.31□□□□□ -1.08
Nck1-201ENSMUST00000112874 Cavin2Q63918 418 aaKnown RBP8.31□□□□□ -1.08
Nck1-201ENSMUST00000112874 Skiv2lQ6NZR5 1244 aa8.31□□□□□ -1.08
Nck1-201ENSMUST00000112874 Ppm1fQ8CGA0 452 aa8.31□□□□□ -1.08
Nck1-201ENSMUST00000112874 Plin1Q8CGN5 517 aa8.31□□□□□ -1.08
Nck1-201ENSMUST00000112874 Prc1Q99K43 603 aaKnown RBP8.31□□□□□ -1.08
Nck1-201ENSMUST00000112874 Homer1Q9Z2Y3 366 aa8.31□□□□□ -1.08
Nck1-201ENSMUST00000112874 Abcc9P70170 1546 aa8.3□□□□□ -1.08
Nck1-201ENSMUST00000112874 Gm20521D3Z5F7 333 aa8.3□□□□□ -1.08
Nck1-201ENSMUST00000112874 Cald1E9QA15 768 aaKnown RBP8.3□□□□□ -1.08
Nck1-201ENSMUST00000112874 Foxd1Q61345 456 aa8.3□□□□□ -1.08
Nck1-201ENSMUST00000112874 ChpfQ6IQX7 774 aa8.3□□□□□ -1.08
Nck1-201ENSMUST00000112874 Polr3gQ6NXY9 223 aa8.3□□□□□ -1.08
Nck1-201ENSMUST00000112874 Nme8Q715T0 586 aa8.3□□□□□ -1.08
Nck1-201ENSMUST00000112874 Cnga1P29974 684 aa8.29□□□□□ -1.08
Nck1-201ENSMUST00000112874 Pagr1aQ99L02 253 aa8.29□□□□□ -1.08
Nck1-201ENSMUST00000112874 Spata17Q9D552 379 aa8.29□□□□□ -1.08
Nck1-201ENSMUST00000112874 AU015836B2RUM3 263 aa8.29□□□□□ -1.08
Nck1-201ENSMUST00000112874 Lekr1B2RVN1 116 aa8.29□□□□□ -1.08
Nck1-201ENSMUST00000112874 Camk4P08414 469 aa8.29□□□□□ -1.08
Nck1-201ENSMUST00000112874 InaP46660 501 aa8.29□□□□□ -1.08
Nck1-201ENSMUST00000112874 Pcmtd1P59913 357 aa8.29□□□□□ -1.08
Nck1-201ENSMUST00000112874 Anapc15P60007 132 aa8.29□□□□□ -1.08
Nck1-201ENSMUST00000112874 Nucb1Q02819 459 aaKnown RBP8.29□□□□□ -1.08
Nck1-201ENSMUST00000112874 Swap70Q6A028 585 aaKnown RBP8.29□□□□□ -1.08
Nck1-201ENSMUST00000112874 Ddx11Q6AXC6 880 aa8.29□□□□□ -1.08
Nck1-201ENSMUST00000112874 Rasgrp4Q8BTM9 673 aa8.29□□□□□ -1.08
Nck1-201ENSMUST00000112874 Ice2Q3UZ18 988 aaKnown RBP8.28□□□□□ -1.08
Nck1-201ENSMUST00000112874 Ttf2Q5NC05 1138 aa8.28□□□□□ -1.08
Nck1-201ENSMUST00000112874 Frmd4aQ8BIE6 1020 aa8.28□□□□□ -1.08
Nck1-201ENSMUST00000112874 Rnf25Q9QZR0 456 aa8.28□□□□□ -1.08
Nck1-201ENSMUST00000112874 Ppfia4B8QI36 1187 aa8.27□□□□□ -1.09
Nck1-201ENSMUST00000112874 Psmc1P62192 440 aa8.27□□□□□ -1.09
Nck1-201ENSMUST00000112874 Mctp2Q5RJH2 878 aa8.27□□□□□ -1.09
Nck1-201ENSMUST00000112874 Bms1Q6PGF5 1284 aaKnown RBP8.27□□□□□ -1.09
Nck1-201ENSMUST00000112874 Casc1Q6TDU8 730 aa8.27□□□□□ -1.09
Nck1-201ENSMUST00000112874 Ttc1Q91Z38 292 aa8.27□□□□□ -1.09
Nck1-201ENSMUST00000112874 Borcs6Q9D6W8 360 aa8.27□□□□□ -1.09
Nck1-201ENSMUST00000112874 Calr3Q9D9Q6 380 aa8.27□□□□□ -1.09
Nck1-201ENSMUST00000112874 Plekhd1B2RPU2 505 aa8.26□□□□□ -1.09
Nck1-201ENSMUST00000112874 Speer4aF8VPX6 267 aa8.26□□□□□ -1.09
Nck1-201ENSMUST00000112874 Klra5Q60652 266 aa8.26□□□□□ -1.09
Nck1-201ENSMUST00000112874 Lamc2Q61092 1191 aa8.26□□□□□ -1.09
Nck1-201ENSMUST00000112874 Kank4Q6P9J5 1016 aa8.26□□□□□ -1.09
Nck1-201ENSMUST00000112874 Lmbrd2Q8C561 694 aa8.26□□□□□ -1.09
Nck1-201ENSMUST00000112874 Tshz3Q8CGV9 1081 aa8.26□□□□□ -1.09
Nck1-201ENSMUST00000112874 Stk26Q99JT2 416 aa8.26□□□□□ -1.09
Nck1-201ENSMUST00000112874 Get4Q9D1H7 327 aa8.26□□□□□ -1.09
Nck1-201ENSMUST00000112874 Dhx8A2A4P0 1244 aaKnown RBP8.25□□□□□ -1.09
Nck1-201ENSMUST00000112874 Ppfia1B2RXQ2 1266 aa8.25□□□□□ -1.09
Nck1-201ENSMUST00000112874 Adam7O35227 789 aa8.25□□□□□ -1.09
Nck1-201ENSMUST00000112874 Axin1O35625 863 aa8.25□□□□□ -1.09
Nck1-201ENSMUST00000112874 ElnP54320 860 aa8.25□□□□□ -1.09
Nck1-201ENSMUST00000112874 Ppp1r1bQ60829 194 aa8.25□□□□□ -1.09
Nck1-201ENSMUST00000112874 ErfeQ6PGN1 340 aa8.25□□□□□ -1.09
Nck1-201ENSMUST00000112874 GphnQ8BUV3 769 aaKnown RBP8.25□□□□□ -1.09
Nck1-201ENSMUST00000112874 Spire2Q8K1S6 718 aa8.25□□□□□ -1.09
Nck1-201ENSMUST00000112874 Mkl1Q8K4J6 964 aa8.25□□□□□ -1.09
Nck1-201ENSMUST00000112874 F10O88947 481 aa8.24□□□□□ -1.09
Nck1-201ENSMUST00000112874 Wee1P47810 646 aa8.24□□□□□ -1.09
Nck1-201ENSMUST00000112874 Cep63Q3UPP8 700 aa8.24□□□□□ -1.09
Nck1-201ENSMUST00000112874 Klra8Q60682 266 aa8.24□□□□□ -1.09
Nck1-201ENSMUST00000112874 Cep131Q62036 1060 aa8.24□□□□□ -1.09
Nck1-201ENSMUST00000112874 Q922C1 641 aa8.24□□□□□ -1.09
Nck1-201ENSMUST00000112874 Sugt1Q9CX34 336 aa8.24□□□□□ -1.09
Nck1-201ENSMUST00000112874 Galntl5Q9D4M9 431 aa8.24□□□□□ -1.09
Nck1-201ENSMUST00000112874 Capn10Q9ESK3 666 aa8.24□□□□□ -1.09
Nck1-201ENSMUST00000112874 ChmQ9QXG2 665 aa8.24□□□□□ -1.09
Nck1-201ENSMUST00000112874 FanciQ8K368 1330 aa8.24□□□□□ -1.09
Nck1-201ENSMUST00000112874 Thap8E9Q695 213 aa8.24□□□□□ -1.09
Nck1-201ENSMUST00000112874 EvlP70429 414 aa8.24□□□□□ -1.09
Nck1-201ENSMUST00000112874 Nbr1P97432 988 aa8.24□□□□□ -1.09
Nck1-201ENSMUST00000112874 Q3UJP5 209 aa8.24□□□□□ -1.09
Nck1-201ENSMUST00000112874 Mapre1Q61166 268 aaKnown RBP8.24□□□□□ -1.09
Nck1-201ENSMUST00000112874 Zbtb7bQ64321 544 aa8.24□□□□□ -1.09
Nck1-201ENSMUST00000112874 Cdc5lQ6A068 802 aaKnown RBP8.24□□□□□ -1.09
Nck1-201ENSMUST00000112874 Q8BZJ8 459 aa8.24□□□□□ -1.09
Nck1-201ENSMUST00000112874 Cc2d1aQ8K1A6 943 aa8.24□□□□□ -1.09
Nck1-201ENSMUST00000112874 Zcrb1Q9CZ96 217 aaKnown RBP8.24□□□□□ -1.09
Nck1-201ENSMUST00000112874 Ndufv2Q9D6J6 248 aa8.24□□□□□ -1.09
Nck1-201ENSMUST00000112874 Slc52a2Q9D8F3 450 aa8.24□□□□□ -1.09
Nck1-201ENSMUST00000112874 Klhl41A2AUC9 606 aa8.23□□□□□ -1.09
Nck1-201ENSMUST00000112874 Qtrt2B8ZXI1 415 aa8.23□□□□□ -1.09
Nck1-201ENSMUST00000112874 Erich2E9Q1A6 463 aa8.23□□□□□ -1.09
Nck1-201ENSMUST00000112874 Hif1aQ61221 836 aaKnown RBP8.23□□□□□ -1.09
Nck1-201ENSMUST00000112874 Brinp2Q6DFY8 783 aa8.23□□□□□ -1.09
Nck1-201ENSMUST00000112874 Klhl23Q6GQU2 558 aa8.23□□□□□ -1.09
Nck1-201ENSMUST00000112874 Atad2Q8CDM1 1040 aa8.23□□□□□ -1.09
Nck1-201ENSMUST00000112874 Speer4bQ9D9F7 267 aa8.23□□□□□ -1.09
Nck1-201ENSMUST00000112874 Gabbr1Q9WV18 960 aa8.23□□□□□ -1.09
Nck1-201ENSMUST00000112874 ScribQ80U72 1612 aa8.23□□□□□ -1.09
Nck1-201ENSMUST00000112874 Naaladl2A0A0N4SUJ3 795 aa8.22□□□□□ -1.09
Nck1-201ENSMUST00000112874 Ercc3P49135 783 aa8.22□□□□□ -1.09
Nck1-201ENSMUST00000112874 ScinQ60604 715 aa8.22□□□□□ -1.09
Retrieved 100 of 22,080 RNA–protein pairs in 73.4 ms