RNA–Protein interactions for RNA: ENSMUST00000100237.3

Ttf1-201, Transcript of Transcription termination factor 1, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ttf1, Length 4,160 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ttf1-201ENSMUST00000100237 Casc1Q6TDU8 730 aa8.5□□□□□ -1.05
Ttf1-201ENSMUST00000100237 Ppp2r1aQ76MZ3 589 aa8.5□□□□□ -1.05
Ttf1-201ENSMUST00000100237 Ylpm1Q9R0I7 1386 aaKnown RBP8.5□□□□□ -1.05
Ttf1-201ENSMUST00000100237 Ncoa1P70365 1447 aa8.5□□□□□ -1.05
Ttf1-201ENSMUST00000100237 Pcdhb20Q91XZ9 799 aa8.5□□□□□ -1.05
Ttf1-201ENSMUST00000100237 Ccdc60Q8C4J0 545 aa8.49□□□□□ -1.05
Ttf1-201ENSMUST00000100237 Plagl1Q9JLQ4 704 aa8.49□□□□□ -1.05
Ttf1-201ENSMUST00000100237 Lekr1B2RVN1 116 aa8.49□□□□□ -1.05
Ttf1-201ENSMUST00000100237 Rab3gap2Q8BMG7 1366 aa8.49□□□□□ -1.05
Ttf1-201ENSMUST00000100237 Eif2s2Q99L45 331 aaKnown RBP8.49□□□□□ -1.05
Ttf1-201ENSMUST00000100237 Rprd2Q6NXI6 1469 aaKnown RBP8.48□□□□□ -1.05
Ttf1-201ENSMUST00000100237 GorabQ8BRM2 368 aa8.48□□□□□ -1.05
Ttf1-201ENSMUST00000100237 TnnQ80Z71 1560 aa8.48□□□□□ -1.05
Ttf1-201ENSMUST00000100237 Tpm2P58774 284 aa8.48□□□□□ -1.05
Ttf1-201ENSMUST00000100237 G3bp1P97855 465 aaKnown RBP8.48□□□□□ -1.05
Ttf1-201ENSMUST00000100237 Arhgap5P97393 1501 aa8.48□□□□□ -1.05
Ttf1-201ENSMUST00000100237 L3mbtl2P59178 703 aa8.47□□□□□ -1.05
Ttf1-201ENSMUST00000100237 Atl3Q91YH5 541 aa8.47□□□□□ -1.05
Ttf1-201ENSMUST00000100237 Camsap2Q8C1B1 1461 aa8.47□□□□□ -1.05
Ttf1-201ENSMUST00000100237 Crocc2F6XLV1 1638 aa8.47□□□□□ -1.05
Ttf1-201ENSMUST00000100237 Ccdc141E9Q8Q6 1531 aa8.47□□□□□ -1.05
Ttf1-201ENSMUST00000100237 Qtrt2B8ZXI1 415 aa8.47□□□□□ -1.05
Ttf1-201ENSMUST00000100237 Kcnh8P59111 1102 aa8.47□□□□□ -1.05
Ttf1-201ENSMUST00000100237 Fam114a1Q9D281 569 aa8.47□□□□□ -1.05
Ttf1-201ENSMUST00000100237 Fyb1O35601 819 aa8.47□□□□□ -1.05
Ttf1-201ENSMUST00000100237 Zc3h15Q3TIV5 426 aaKnown RBP8.47□□□□□ -1.05
Ttf1-201ENSMUST00000100237 Puf60Q3UEB3 564 aaKnown RBP8.47□□□□□ -1.05
Ttf1-201ENSMUST00000100237 Map3k5O35099 1380 aa8.46□□□□□ -1.05
Ttf1-201ENSMUST00000100237 Q3TQI7 289 aaKnown RBP8.46□□□□□ -1.05
Ttf1-201ENSMUST00000100237 ErmnQ5EBJ4 281 aa8.46□□□□□ -1.05
Ttf1-201ENSMUST00000100237 Cgnl1Q6AW69 1298 aa8.46□□□□□ -1.05
Ttf1-201ENSMUST00000100237 Pank1Q8K4K6 548 aa8.46□□□□□ -1.05
Ttf1-201ENSMUST00000100237 Znf526Q8BI66 675 aa8.46□□□□□ -1.06
Ttf1-201ENSMUST00000100237 Gm1043A0A140LJC2 1431 aa8.46□□□□□ -1.06
Ttf1-201ENSMUST00000100237 Kif20aP97329 887 aa8.46□□□□□ -1.06
Ttf1-201ENSMUST00000100237 1700017N19RikA0A087WPJ1 469 aa8.45□□□□□ -1.06
Ttf1-201ENSMUST00000100237 Shq1Q7TMX5 569 aa8.45□□□□□ -1.06
Ttf1-201ENSMUST00000100237 Erich6bQ9D4S6 220 aa8.45□□□□□ -1.06
Ttf1-201ENSMUST00000100237 Ccdc183A2AJB1 534 aa8.45□□□□□ -1.06
Ttf1-201ENSMUST00000100237 Rsph3aQ3UFY4 516 aa8.45□□□□□ -1.06
Ttf1-201ENSMUST00000100237 Ripk4Q9ERK0 786 aa8.45□□□□□ -1.06
Ttf1-201ENSMUST00000100237 Hspa1lP16627 641 aa8.45□□□□□ -1.06
Ttf1-201ENSMUST00000100237 Evi5P97366 809 aa8.44□□□□□ -1.06
Ttf1-201ENSMUST00000100237 Mink1Q9JM52 1308 aa8.44□□□□□ -1.06
Ttf1-201ENSMUST00000100237 PrxO55103 1391 aa8.44□□□□□ -1.06
Ttf1-201ENSMUST00000100237 Asxl1P59598 1514 aa8.44□□□□□ -1.06
Ttf1-201ENSMUST00000100237 Rabep1O35551 862 aa8.44□□□□□ -1.06
Ttf1-201ENSMUST00000100237 Pde3bQ61409 1100 aa8.44□□□□□ -1.06
Ttf1-201ENSMUST00000100237 Eif4g2Q62448 906 aaKnown RBP8.44□□□□□ -1.06
Ttf1-201ENSMUST00000100237 Grin2aP35436 1464 aa8.44□□□□□ -1.06
Ttf1-201ENSMUST00000100237 KarsQ99MN1 595 aaKnown RBP8.44□□□□□ -1.06
Ttf1-201ENSMUST00000100237 Magi1Q6RHR9 1471 aa8.44□□□□□ -1.06
Ttf1-201ENSMUST00000100237 OscarQ8VBT3 265 aa8.43□□□□□ -1.06
Ttf1-201ENSMUST00000100237 Pik3c2gO70167 1506 aa8.43□□□□□ -1.06
Ttf1-201ENSMUST00000100237 Ccdc146E9Q9F7 977 aa8.43□□□□□ -1.06
Ttf1-201ENSMUST00000100237 Ano8Q6PB70 1060 aa8.43□□□□□ -1.06
Ttf1-201ENSMUST00000100237 Fam13bQ8K2H3 851 aa8.43□□□□□ -1.06
Ttf1-201ENSMUST00000100237 Rapgef3Q8VCC8 918 aa8.43□□□□□ -1.06
Ttf1-201ENSMUST00000100237 Stk31Q99MW1 1018 aa8.43□□□□□ -1.06
Ttf1-201ENSMUST00000100237 Gpatch8A2A6A1 1505 aa8.43□□□□□ -1.06
Ttf1-201ENSMUST00000100237 Clcn1Q64347 994 aa8.43□□□□□ -1.06
Ttf1-201ENSMUST00000100237 Polr3aB2RXC6 1390 aa8.43□□□□□ -1.06
Ttf1-201ENSMUST00000100237 DroshaQ5HZJ0 1373 aaKnown RBP8.43□□□□□ -1.06
Ttf1-201ENSMUST00000100237 Cald1E9QA15 768 aaKnown RBP8.43□□□□□ -1.06
Ttf1-201ENSMUST00000100237 Shroom2A2ALU4 1481 aa8.42□□□□□ -1.06
Ttf1-201ENSMUST00000100237 Pibf1E9Q6K3 756 aa8.42□□□□□ -1.06
Ttf1-201ENSMUST00000100237 Kiaa0753Q6A000 959 aa8.41□□□□□ -1.06
Ttf1-201ENSMUST00000100237 Znf771Q8BJ90 317 aa8.41□□□□□ -1.06
Ttf1-201ENSMUST00000100237 Gsto1O09131 240 aa8.41□□□□□ -1.06
Ttf1-201ENSMUST00000100237 Themis2Q91YX0 663 aa8.41□□□□□ -1.06
Ttf1-201ENSMUST00000100237 Pes1Q9EQ61 584 aaKnown RBP8.41□□□□□ -1.06
Ttf1-201ENSMUST00000100237 PtprtQ99M80 1454 aa8.41□□□□□ -1.06
Ttf1-201ENSMUST00000100237 Mlh3A0A1Y7VMP7 1443 aa8.41□□□□□ -1.06
Ttf1-201ENSMUST00000100237 SlkO54988 1233 aa8.41□□□□□ -1.06
Ttf1-201ENSMUST00000100237 Atp6v1dP57746 247 aa8.41□□□□□ -1.06
Ttf1-201ENSMUST00000100237 Acsbg1Q99PU5 721 aa8.41□□□□□ -1.06
Ttf1-201ENSMUST00000100237 Swt1Q9DBQ9 907 aa8.4□□□□□ -1.06
Ttf1-201ENSMUST00000100237 OsbpQ3B7Z2 805 aa8.4□□□□□ -1.07
Ttf1-201ENSMUST00000100237 Skiv2lQ6NZR5 1244 aa8.4□□□□□ -1.07
Ttf1-201ENSMUST00000100237 Adam1bQ8R534 806 aa8.4□□□□□ -1.07
Ttf1-201ENSMUST00000100237 Arhgap4B1AUY3 965 aa8.4□□□□□ -1.07
Ttf1-201ENSMUST00000100237 Ppp2r3aB2RXC8 1150 aa8.4□□□□□ -1.07
Ttf1-201ENSMUST00000100237 Smarce1O54941 411 aaKnown RBP8.4□□□□□ -1.07
Ttf1-201ENSMUST00000100237 Rfx1P48377 963 aa8.4□□□□□ -1.07
Ttf1-201ENSMUST00000100237 Gnai1B2RSH2 354 aa8.39□□□□□ -1.07
Ttf1-201ENSMUST00000100237 Rbm25B2RY56 838 aaKnown RBP8.39□□□□□ -1.07
Ttf1-201ENSMUST00000100237 Apaf1O88879 1249 aa8.39□□□□□ -1.07
Ttf1-201ENSMUST00000100237 Hmgb2P30681 210 aaKnown RBP8.39□□□□□ -1.07
Ttf1-201ENSMUST00000100237 SnrkQ8VDU5 748 aa8.39□□□□□ -1.07
Ttf1-201ENSMUST00000100237 Gnai3Q9DC51 354 aa8.39□□□□□ -1.07
Ttf1-201ENSMUST00000100237 Caskin1Q6P9K8 1431 aa8.39□□□□□ -1.07
Ttf1-201ENSMUST00000100237 Ddrgk1Q80WW9 315 aa8.39□□□□□ -1.07
Ttf1-201ENSMUST00000100237 Tnnt1O88346 262 aa8.39□□□□□ -1.07
Ttf1-201ENSMUST00000100237 Cetn4Q8K4K1 168 aa8.39□□□□□ -1.07
Ttf1-201ENSMUST00000100237 Erich3F6QRE9 1637 aa8.38□□□□□ -1.07
Ttf1-201ENSMUST00000100237 Casq1O09165 405 aa8.38□□□□□ -1.07
Ttf1-201ENSMUST00000100237 Kcnj4P52189 445 aa8.38□□□□□ -1.07
Ttf1-201ENSMUST00000100237 Irf6P97431 467 aa8.38□□□□□ -1.07
Ttf1-201ENSMUST00000100237 ZgpatQ8VDM1 511 aa8.38□□□□□ -1.07
Ttf1-201ENSMUST00000100237 Abcc1O35379 1528 aa8.38□□□□□ -1.07
Retrieved 100 of 22,080 RNA–protein pairs in 66.5 ms