RNA–Protein interactions for RNA: ENSMUST00000087883.12

Col3a1-201, Transcript of Collagen alpha-1(III) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col3a1, Length 5,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1-201ENSMUST00000087883 Kif18aQ91WD7 886 aa16.6■□□□□ 0.25
Col3a1-201ENSMUST00000087883 CenphQ9QYM8 241 aa16.6■□□□□ 0.25
Col3a1-201ENSMUST00000087883 Phldb1Q6PDH0 1371 aaKnown RBP16.6■□□□□ 0.25
Col3a1-201ENSMUST00000087883 Iqgap2Q3UQ44 1575 aa16.6■□□□□ 0.25
Col3a1-201ENSMUST00000087883 Cc2d2aQ8CFW7 1633 aa16.59■□□□□ 0.25
Col3a1-201ENSMUST00000087883 Cavin4A2AMM0 362 aa16.59■□□□□ 0.25
Col3a1-201ENSMUST00000087883 Pdia4P08003 638 aaKnown RBP16.59■□□□□ 0.25
Col3a1-201ENSMUST00000087883 Gnai2P08752 355 aaKnown RBP16.59■□□□□ 0.25
Col3a1-201ENSMUST00000087883 Puf60Q3UEB3 564 aaKnown RBP16.59■□□□□ 0.25
Col3a1-201ENSMUST00000087883 Apaf1O88879 1249 aa16.59■□□□□ 0.25
Col3a1-201ENSMUST00000087883 Fam43aQ8BUP8 424 aa16.59■□□□□ 0.25
Col3a1-201ENSMUST00000087883 Jakmip1Q8BVL9 626 aa16.59■□□□□ 0.25
Col3a1-201ENSMUST00000087883 Nat10Q8K224 1024 aaKnown RBP16.59■□□□□ 0.25
Col3a1-201ENSMUST00000087883 Ppp4r3bQ922R5 820 aa16.59■□□□□ 0.25
Col3a1-201ENSMUST00000087883 Prpf4bQ61136 1007 aaKnown RBP16.58■□□□□ 0.25
Col3a1-201ENSMUST00000087883 Agtpbp1Q641K1 1218 aa16.58■□□□□ 0.25
Col3a1-201ENSMUST00000087883 Znf692Q3U381 531 aa16.58■□□□□ 0.24
Col3a1-201ENSMUST00000087883 Lrrcc1Q69ZB0 1026 aa16.58■□□□□ 0.24
Col3a1-201ENSMUST00000087883 Krt85Q9Z2T6 507 aa16.58■□□□□ 0.24
Col3a1-201ENSMUST00000087883 Ift57Q8BXG3 429 aa16.57■□□□□ 0.24
Col3a1-201ENSMUST00000087883 BbxQ8VBW5 907 aa16.57■□□□□ 0.24
Col3a1-201ENSMUST00000087883 Ppm1fQ8CGA0 452 aa16.57■□□□□ 0.24
Col3a1-201ENSMUST00000087883 Vps8Q0P5W1 1427 aa16.57■□□□□ 0.24
Col3a1-201ENSMUST00000087883 Rad54l2Q99NG0 1466 aa16.57■□□□□ 0.24
Col3a1-201ENSMUST00000087883 Pmfbp1Q9WVQ0 1022 aa16.57■□□□□ 0.24
Col3a1-201ENSMUST00000087883 Eif3aP23116 1344 aaKnown RBP16.56■□□□□ 0.24
Col3a1-201ENSMUST00000087883 Nsd2Q8BVE8 1365 aa16.56■□□□□ 0.24
Col3a1-201ENSMUST00000087883 Eva1cP58659 440 aa16.56■□□□□ 0.24
Col3a1-201ENSMUST00000087883 Lamb3Q61087 1168 aa16.56■□□□□ 0.24
Col3a1-201ENSMUST00000087883 Secisbp2lQ6A098 1086 aaKnown RBP16.56■□□□□ 0.24
Col3a1-201ENSMUST00000087883 Erlin2Q8BFZ9 340 aa16.56■□□□□ 0.24
Col3a1-201ENSMUST00000087883 Ccdc96Q9CR92 584 aa16.56■□□□□ 0.24
Col3a1-201ENSMUST00000087883 Cux1P53564 1515 aa16.56■□□□□ 0.24
Col3a1-201ENSMUST00000087883 Tango6Q8C3S2 1079 aa16.55■□□□□ 0.24
Col3a1-201ENSMUST00000087883 Zfp644E9QA22 1323 aa16.55■□□□□ 0.24
Col3a1-201ENSMUST00000087883 Abcd1P48410 736 aa16.55■□□□□ 0.24
Col3a1-201ENSMUST00000087883 Nup88Q8CEC0 753 aaKnown RBP16.55■□□□□ 0.24
Col3a1-201ENSMUST00000087883 Kif20aP97329 887 aa16.55■□□□□ 0.24
Col3a1-201ENSMUST00000087883 Samm50Q8BGH2 469 aa16.55■□□□□ 0.24
Col3a1-201ENSMUST00000087883 Phldb2Q8K1N2 1249 aa16.55■□□□□ 0.24
Col3a1-201ENSMUST00000087883 Med4Q9CQA5 270 aa16.55■□□□□ 0.24
Col3a1-201ENSMUST00000087883 Cep89Q9CZX2 791 aa16.55■□□□□ 0.24
Col3a1-201ENSMUST00000087883 Ccdc181Q80ZU5 509 aa16.54■□□□□ 0.24
Col3a1-201ENSMUST00000087883 Syce3B5KM66 88 aa16.54■□□□□ 0.24
Col3a1-201ENSMUST00000087883 Pip4k2aO70172 405 aa16.54■□□□□ 0.24
Col3a1-201ENSMUST00000087883 Otud6bQ8K2H2 294 aa16.54■□□□□ 0.24
Col3a1-201ENSMUST00000087883 FanciQ8K368 1330 aa16.54■□□□□ 0.24
Col3a1-201ENSMUST00000087883 Slc13a4Q8BZ82 625 aa16.54■□□□□ 0.24
Col3a1-201ENSMUST00000087883 Tubb6Q922F4 447 aa16.54■□□□□ 0.24
Col3a1-201ENSMUST00000087883 Gbp4Q61107 620 aa16.53■□□□□ 0.24
Col3a1-201ENSMUST00000087883 OptnQ8K3K8 584 aa16.53■□□□□ 0.24
Col3a1-201ENSMUST00000087883 Atp2b2Q9R0K7 1198 aa16.53■□□□□ 0.24
Col3a1-201ENSMUST00000087883 Nol8Q3UHX0 1147 aaKnown RBP16.53■□□□□ 0.24
Col3a1-201ENSMUST00000087883 TimelessQ9R1X4 1197 aa16.53■□□□□ 0.24
Col3a1-201ENSMUST00000087883 CenpqQ9CPQ5 267 aa16.52■□□□□ 0.24
Col3a1-201ENSMUST00000087883 Eif5P59325 429 aaKnown RBP16.52■□□□□ 0.23
Col3a1-201ENSMUST00000087883 Spag5Q7TME2 1165 aa16.52■□□□□ 0.23
Col3a1-201ENSMUST00000087883 MpripP97434 1024 aa16.52■□□□□ 0.23
Col3a1-201ENSMUST00000087883 Slu7Q8BHJ9 585 aa16.52■□□□□ 0.23
Col3a1-201ENSMUST00000087883 Tfip11Q9ERA6 838 aaKnown RBP16.52■□□□□ 0.23
Col3a1-201ENSMUST00000087883 Cbx1P83917 185 aaKnown RBP16.51■□□□□ 0.23
Col3a1-201ENSMUST00000087883 Erich4Q3UNU4 136 aa16.51■□□□□ 0.23
Col3a1-201ENSMUST00000087883 Larp1Q6ZQ58 1072 aaKnown RBP16.51■□□□□ 0.23
Col3a1-201ENSMUST00000087883 Erc1Q99MI1 1120 aa16.51■□□□□ 0.23
Col3a1-201ENSMUST00000087883 Ncoa2Q61026 1462 aa16.51■□□□□ 0.23
Col3a1-201ENSMUST00000087883 Fam184aE9PW83 1143 aa16.51■□□□□ 0.23
Col3a1-201ENSMUST00000087883 TatQ8QZR1 454 aa16.51■□□□□ 0.23
Col3a1-201ENSMUST00000087883 Cfap58B2RW38 873 aa16.51■□□□□ 0.23
Col3a1-201ENSMUST00000087883 Cwc27Q3TKY6 469 aa16.51■□□□□ 0.23
Col3a1-201ENSMUST00000087883 Ppm1eQ80TL0 749 aa16.5■□□□□ 0.23
Col3a1-201ENSMUST00000087883 Gnl2Q99LH1 728 aaKnown RBP16.5■□□□□ 0.23
Col3a1-201ENSMUST00000087883 Themis2Q91YX0 663 aa16.5■□□□□ 0.23
Col3a1-201ENSMUST00000087883 Gm10471E9Q1C7 252 aa16.5■□□□□ 0.23
Col3a1-201ENSMUST00000087883 Fkbp4P30416 458 aa16.5■□□□□ 0.23
Col3a1-201ENSMUST00000087883 Gnl3lQ6PGG6 577 aaKnown RBP16.5■□□□□ 0.23
Col3a1-201ENSMUST00000087883 Luc7lQ9CYI4 371 aaKnown RBP16.5■□□□□ 0.23
Col3a1-201ENSMUST00000087883 Map9Q3TRR0 646 aa16.5■□□□□ 0.23
Col3a1-201ENSMUST00000087883 Cabp2Q9JLK4 216 aa16.5■□□□□ 0.23
Col3a1-201ENSMUST00000087883 LrpprcQ6PB66 1392 aaKnown RBP16.49■□□□□ 0.23
Col3a1-201ENSMUST00000087883 Cep57l1Q8VDS7 400 aa16.49■□□□□ 0.23
Col3a1-201ENSMUST00000087883 Sytl4Q9R0Q1 673 aa16.49■□□□□ 0.23
Col3a1-201ENSMUST00000087883 Sel1lQ9Z2G6 790 aa16.49■□□□□ 0.23
Col3a1-201ENSMUST00000087883 Stim1P70302 685 aa16.49■□□□□ 0.23
Col3a1-201ENSMUST00000087883 Pde4cQ3UEI1 686 aa16.49■□□□□ 0.23
Col3a1-201ENSMUST00000087883 Ift140E9PY46 1464 aa16.49■□□□□ 0.23
Col3a1-201ENSMUST00000087883 HypkQ9CR41 129 aa16.49■□□□□ 0.23
Col3a1-201ENSMUST00000087883 CarsQ9ER72 831 aaKnown RBP16.49■□□□□ 0.23
Col3a1-201ENSMUST00000087883 Washc4Q3UMB9 1173 aa16.48■□□□□ 0.23
Col3a1-201ENSMUST00000087883 Fsd1Q7TPM6 496 aa16.48■□□□□ 0.23
Col3a1-201ENSMUST00000087883 Srgap3Q812A2 1099 aa16.48■□□□□ 0.23
Col3a1-201ENSMUST00000087883 NcapgE9PWG6 1004 aa16.48■□□□□ 0.23
Col3a1-201ENSMUST00000087883 Cnnm1Q0GA42 951 aa16.48■□□□□ 0.23
Col3a1-201ENSMUST00000087883 Dusp27Q148W8 1138 aa16.48■□□□□ 0.23
Col3a1-201ENSMUST00000087883 Rnf187Q8BFX1 236 aa16.48■□□□□ 0.23
Col3a1-201ENSMUST00000087883 TefQ9JLC6 301 aa16.48■□□□□ 0.23
Col3a1-201ENSMUST00000087883 MicalclQ9D5U9 680 aa16.48■□□□□ 0.23
Col3a1-201ENSMUST00000087883 Q9D9H8 365 aa16.48■□□□□ 0.23
Col3a1-201ENSMUST00000087883 Cdc45Q9Z1X9 566 aa16.48■□□□□ 0.23
Col3a1-201ENSMUST00000087883 Cpa2Q504N0 417 aa16.47■□□□□ 0.23
Col3a1-201ENSMUST00000087883 Chrna2Q91X60 512 aa16.47■□□□□ 0.23
Retrieved 100 of 22,080 RNA–protein pairs in 29.6 ms