RNA–Protein interactions for RNA: ENSMUST00000053317.11

Bdnf-201, Transcript of Brain-derived neurotrophic factor, mousemouse

TSL 1 (best) BASIC

Gene Bdnf, Length 4,266 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-201ENSMUST00000053317 Cadps2Q8BYR5 1297 aa9.08□□□□□ -0.96
Bdnf-201ENSMUST00000053317 PaskQ8CEE6 1383 aa9.08□□□□□ -0.96
Bdnf-201ENSMUST00000053317 Mapk8ip3Q9ESN9 1337 aa9.08□□□□□ -0.96
Bdnf-201ENSMUST00000053317 Mroh1E0CZ22 1640 aa9.08□□□□□ -0.96
Bdnf-201ENSMUST00000053317 Ppm1fQ8CGA0 452 aa9.08□□□□□ -0.96
Bdnf-201ENSMUST00000053317 Speer4bQ9D9F7 267 aa9.08□□□□□ -0.96
Bdnf-201ENSMUST00000053317 Cep170bQ80U49 1574 aa9.08□□□□□ -0.96
Bdnf-201ENSMUST00000053317 Cc2d1aQ8K1A6 943 aa9.08□□□□□ -0.96
Bdnf-201ENSMUST00000053317 Pik3r4Q8VD65 1358 aa9.07□□□□□ -0.96
Bdnf-201ENSMUST00000053317 Kcnh5Q920E3 988 aa9.07□□□□□ -0.96
Bdnf-201ENSMUST00000053317 Trpm1Q2TV84 1622 aa9.07□□□□□ -0.96
Bdnf-201ENSMUST00000053317 Nlgn1Q99K10 843 aa9.07□□□□□ -0.96
Bdnf-201ENSMUST00000053317 Med1Q925J9 1575 aa9.07□□□□□ -0.96
Bdnf-201ENSMUST00000053317 Bcl2l12Q9D3J3 255 aa9.07□□□□□ -0.96
Bdnf-201ENSMUST00000053317 Arhgef28P97433 1693 aa9.07□□□□□ -0.96
Bdnf-201ENSMUST00000053317 Lrrc59Q922Q8 307 aaKnown RBP9.06□□□□□ -0.96
Bdnf-201ENSMUST00000053317 Kif13aQ9EQW7 1749 aa9.06□□□□□ -0.96
Bdnf-201ENSMUST00000053317 U2surpQ6NV83 1029 aaKnown RBP9.06□□□□□ -0.96
Bdnf-201ENSMUST00000053317 Q7TT23 1179 aa9.06□□□□□ -0.96
Bdnf-201ENSMUST00000053317 NeflP08551 543 aa9.05□□□□□ -0.96
Bdnf-201ENSMUST00000053317 Nol11Q8BJW5 723 aaKnown RBP9.05□□□□□ -0.96
Bdnf-201ENSMUST00000053317 Amotl2Q8K371 772 aa9.05□□□□□ -0.96
Bdnf-201ENSMUST00000053317 Nrxn3Q6P9K9 1571 aa9.05□□□□□ -0.96
Bdnf-201ENSMUST00000053317 Rimbp3Q3V0F0 1606 aa9.05□□□□□ -0.96
Bdnf-201ENSMUST00000053317 Rtf1A2AQ19 715 aaKnown RBP9.05□□□□□ -0.96
Bdnf-201ENSMUST00000053317 Zeb2Q9R0G7 1215 aa9.05□□□□□ -0.96
Bdnf-201ENSMUST00000053317 Nphp4P59240 1425 aa9.04□□□□□ -0.96
Bdnf-201ENSMUST00000053317 Tecpr2Q3UH45 1423 aa9.04□□□□□ -0.96
Bdnf-201ENSMUST00000053317 TkfcQ8VC30 578 aa9.04□□□□□ -0.96
Bdnf-201ENSMUST00000053317 Rtn4Q99P72 1162 aaKnown RBP9.04□□□□□ -0.96
Bdnf-201ENSMUST00000053317 Cpsf1Q9EPU4 1441 aaKnown RBP9.04□□□□□ -0.96
Bdnf-201ENSMUST00000053317 Mcm10Q0VBD2 885 aa9.04□□□□□ -0.96
Bdnf-201ENSMUST00000053317 InhbeO08717 350 aa9.04□□□□□ -0.96
Bdnf-201ENSMUST00000053317 Adamts13Q769J6 1426 aa9.03□□□□□ -0.96
Bdnf-201ENSMUST00000053317 Tmem2Q5FWI3 1383 aa9.03□□□□□ -0.96
Bdnf-201ENSMUST00000053317 Znf526Q8BI66 675 aa9.03□□□□□ -0.96
Bdnf-201ENSMUST00000053317 OptnQ8K3K8 584 aa9.03□□□□□ -0.96
Bdnf-201ENSMUST00000053317 Stk31Q99MW1 1018 aa9.03□□□□□ -0.96
Bdnf-201ENSMUST00000053317 Apaf1O88879 1249 aa9.02□□□□□ -0.96
Bdnf-201ENSMUST00000053317 InsrP15208 1372 aa9.02□□□□□ -0.96
Bdnf-201ENSMUST00000053317 Rims1Q99NE5 1463 aa9.02□□□□□ -0.96
Bdnf-201ENSMUST00000053317 Exoc5Q3TPX4 708 aa9.02□□□□□ -0.97
Bdnf-201ENSMUST00000053317 Rpgrip1lQ8CG73 1264 aa9.02□□□□□ -0.97
Bdnf-201ENSMUST00000053317 Iqcf3Q9D498 203 aa9.02□□□□□ -0.97
Bdnf-201ENSMUST00000053317 Cdhr2E9Q7P9 1308 aa9.02□□□□□ -0.97
Bdnf-201ENSMUST00000053317 Chmp7Q8R1T1 451 aa9.02□□□□□ -0.97
Bdnf-201ENSMUST00000053317 Esx1O88933 382 aa9.02□□□□□ -0.97
Bdnf-201ENSMUST00000053317 GsdmaQ9EST1 446 aa9.02□□□□□ -0.97
Bdnf-201ENSMUST00000053317 Iqgap1Q9JKF1 1657 aaKnown RBP9.02□□□□□ -0.97
Bdnf-201ENSMUST00000053317 Ltbp4Q8K4G1 1666 aa9.01□□□□□ -0.97
Bdnf-201ENSMUST00000053317 Gm6268A2A3U9 297 aa9.01□□□□□ -0.97
Bdnf-201ENSMUST00000053317 Ino80Q6ZPV2 1559 aa9.01□□□□□ -0.97
Bdnf-201ENSMUST00000053317 Gm21663A0A0G2JE01 267 aa9.01□□□□□ -0.97
Bdnf-201ENSMUST00000053317 Gm7361D3Z6R1 267 aa9.01□□□□□ -0.97
Bdnf-201ENSMUST00000053317 5031410I06RikE9Q4E0 267 aa9.01□□□□□ -0.97
Bdnf-201ENSMUST00000053317 Gm1979E9QAN3 267 aa9.01□□□□□ -0.97
Bdnf-201ENSMUST00000053317 Gm5862K7N5V5 267 aa9.01□□□□□ -0.97
Bdnf-201ENSMUST00000053317 Gm10220K7N660 267 aa9.01□□□□□ -0.97
Bdnf-201ENSMUST00000053317 ApobrQ8VBT6 942 aa9□□□□□ -0.97
Bdnf-201ENSMUST00000053317 Cald1E9QA15 768 aaKnown RBP9□□□□□ -0.97
Bdnf-201ENSMUST00000053317 Bcl2l13P59017 434 aa9□□□□□ -0.97
Bdnf-201ENSMUST00000053317 Ddb1Q3U1J4 1140 aaKnown RBP9□□□□□ -0.97
Bdnf-201ENSMUST00000053317 Ppp2r1aQ76MZ3 589 aa9□□□□□ -0.97
Bdnf-201ENSMUST00000053317 Slc12a5Q91V14 1138 aa9□□□□□ -0.97
Bdnf-201ENSMUST00000053317 Bsdc1Q80Y55 427 aa9□□□□□ -0.97
Bdnf-201ENSMUST00000053317 CrbnQ8C7D2 445 aa9□□□□□ -0.97
Bdnf-201ENSMUST00000053317 Golga2Q921M4 999 aa9□□□□□ -0.97
Bdnf-201ENSMUST00000053317 PalmQ9Z0P4 383 aa9□□□□□ -0.97
Bdnf-201ENSMUST00000053317 Bicdl1A0JNT9 577 aa8.99□□□□□ -0.97
Bdnf-201ENSMUST00000053317 Plekhd1B2RPU2 505 aa8.99□□□□□ -0.97
Bdnf-201ENSMUST00000053317 CrklP47941 303 aa8.99□□□□□ -0.97
Bdnf-201ENSMUST00000053317 Ccdc129Q14B48 1034 aa8.99□□□□□ -0.97
Bdnf-201ENSMUST00000053317 Cabp2Q9JLK4 216 aa8.99□□□□□ -0.97
Bdnf-201ENSMUST00000053317 Uggt1Q6P5E4 1551 aa8.99□□□□□ -0.97
Bdnf-201ENSMUST00000053317 Rreb1Q3UH06 1700 aaKnown RBP8.99□□□□□ -0.97
Bdnf-201ENSMUST00000053317 PnisrA2AJT4 805 aaKnown RBP8.99□□□□□ -0.97
Bdnf-201ENSMUST00000053317 Plekhg1F6S200 1446 aa8.98□□□□□ -0.97
Bdnf-201ENSMUST00000053317 RgmbQ7TQ33 436 aa8.98□□□□□ -0.97
Bdnf-201ENSMUST00000053317 Ppp4r2Q0VGB7 417 aa8.98□□□□□ -0.97
Bdnf-201ENSMUST00000053317 Kiaa0319Q5SZV5 1081 aa8.98□□□□□ -0.97
Bdnf-201ENSMUST00000053317 KdrP35918 1367 aa8.98□□□□□ -0.97
Bdnf-201ENSMUST00000053317 Itsn1Q9Z0R4 1714 aa8.98□□□□□ -0.97
Bdnf-201ENSMUST00000053317 Mbd5B1AYB6 1498 aa8.97□□□□□ -0.97
Bdnf-201ENSMUST00000053317 Zscan21Q07231 555 aa8.97□□□□□ -0.97
Bdnf-201ENSMUST00000053317 Hoxc9P09633 260 aa8.97□□□□□ -0.97
Bdnf-201ENSMUST00000053317 Card10P58660 1021 aa8.97□□□□□ -0.97
Bdnf-201ENSMUST00000053317 Ccdc155Q80VJ8 648 aa8.97□□□□□ -0.97
Bdnf-201ENSMUST00000053317 Apbb1Q9QXJ1 710 aa8.97□□□□□ -0.97
Bdnf-201ENSMUST00000053317 Pik3c2bE9QAN8 1632 aa8.97□□□□□ -0.97
Bdnf-201ENSMUST00000053317 Speer4f1Q9D5Q6 258 aa8.97□□□□□ -0.97
Bdnf-201ENSMUST00000053317 Sbno1Q689Z5 1390 aa8.97□□□□□ -0.97
Bdnf-201ENSMUST00000053317 IbtkQ6ZPR6 1352 aaKnown RBP8.97□□□□□ -0.97
Bdnf-201ENSMUST00000053317 Abca8aQ8K442 1620 aa8.96□□□□□ -0.97
Bdnf-201ENSMUST00000053317 Pm20d1Q8C165 503 aa8.96□□□□□ -0.97
Bdnf-201ENSMUST00000053317 Ehbp1l1Q99MS7 1716 aa8.96□□□□□ -0.97
Bdnf-201ENSMUST00000053317 Tmem131lQ3U3D7 1597 aa8.96□□□□□ -0.98
Bdnf-201ENSMUST00000053317 Chd2E9PZM4 1827 aaKnown RBP8.96□□□□□ -0.98
Bdnf-201ENSMUST00000053317 Eya1P97767 591 aa8.96□□□□□ -0.98
Bdnf-201ENSMUST00000053317 Plekhg5Q66T02 1073 aa8.96□□□□□ -0.98
Bdnf-201ENSMUST00000053317 HypkQ9CR41 129 aa8.96□□□□□ -0.98
Retrieved 100 of 22,080 RNA–protein pairs in 30 ms