RNA–Protein interactions for RNA: ENSMUST00000047697.11

Trim17-201, Transcript of E3 ubiquitin-protein ligase TRIM17, mousemouse

TSL 2 BASIC

Gene Trim17, Length 3,664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim17-201ENSMUST00000047697 Gsto1O09131 240 aa12.8□□□□□ -0.36
Trim17-201ENSMUST00000047697 Tbc1d9Q3UYK3 1264 aa12.8□□□□□ -0.36
Trim17-201ENSMUST00000047697 Cc2d1aQ8K1A6 943 aa12.79□□□□□ -0.36
Trim17-201ENSMUST00000047697 Myom2Q14BI5 1463 aa12.79□□□□□ -0.36
Trim17-201ENSMUST00000047697 Ciz1Q8VEH2 845 aa12.79□□□□□ -0.36
Trim17-201ENSMUST00000047697 Atp2b2Q9R0K7 1198 aa12.79□□□□□ -0.36
Trim17-201ENSMUST00000047697 Brd1E9PZ26 1189 aaKnown RBP12.78□□□□□ -0.36
Trim17-201ENSMUST00000047697 CarsQ9ER72 831 aaKnown RBP12.78□□□□□ -0.36
Trim17-201ENSMUST00000047697 Gm32742A0A1B0GT42 1604 aa12.78□□□□□ -0.36
Trim17-201ENSMUST00000047697 Hs1bp3Q3TC93 395 aa12.78□□□□□ -0.36
Trim17-201ENSMUST00000047697 Slc12a5Q91V14 1138 aa12.78□□□□□ -0.36
Trim17-201ENSMUST00000047697 Cdc37l1Q9CZP7 335 aa12.78□□□□□ -0.36
Trim17-201ENSMUST00000047697 Q9D9H8 365 aa12.78□□□□□ -0.36
Trim17-201ENSMUST00000047697 Irx6Q9ER75 438 aa12.78□□□□□ -0.36
Trim17-201ENSMUST00000047697 Ric3Q8BPM6 367 aa12.78□□□□□ -0.36
Trim17-201ENSMUST00000047697 AnkarA2RT91 1465 aa12.78□□□□□ -0.36
Trim17-201ENSMUST00000047697 Dmrtc1Q9D9R7 182 aa12.77□□□□□ -0.36
Trim17-201ENSMUST00000047697 Myo3aQ8K3H5 1613 aa12.77□□□□□ -0.36
Trim17-201ENSMUST00000047697 Gprasp1Q5U4C1 1347 aa12.77□□□□□ -0.37
Trim17-201ENSMUST00000047697 Dnmt1P13864 1620 aaKnown RBP12.77□□□□□ -0.37
Trim17-201ENSMUST00000047697 Hsp90b1P08113 802 aaKnown RBP12.77□□□□□ -0.37
Trim17-201ENSMUST00000047697 Aldh1l1Q8R0Y6 902 aa12.77□□□□□ -0.37
Trim17-201ENSMUST00000047697 MvpQ9EQK5 861 aa12.77□□□□□ -0.37
Trim17-201ENSMUST00000047697 Wdr63B2RY71 923 aa12.76□□□□□ -0.37
Trim17-201ENSMUST00000047697 Gm10093D3YYI8 482 aa12.76□□□□□ -0.37
Trim17-201ENSMUST00000047697 Hdac1O09106 482 aaKnown RBP12.76□□□□□ -0.37
Trim17-201ENSMUST00000047697 VgfQ0VGU4 617 aa12.76□□□□□ -0.37
Trim17-201ENSMUST00000047697 Rbm10Q99KG3 930 aaKnown RBP12.76□□□□□ -0.37
Trim17-201ENSMUST00000047697 Gnai1B2RSH2 354 aa12.75□□□□□ -0.37
Trim17-201ENSMUST00000047697 Cgnl1Q6AW69 1298 aa12.75□□□□□ -0.37
Trim17-201ENSMUST00000047697 Gnai3Q9DC51 354 aa12.75□□□□□ -0.37
Trim17-201ENSMUST00000047697 DmtnQ9WV69 405 aa12.75□□□□□ -0.37
Trim17-201ENSMUST00000047697 Lrriq1Q0P5X1 1673 aa12.75□□□□□ -0.37
Trim17-201ENSMUST00000047697 Rusc2Q80U22 1514 aa12.75□□□□□ -0.37
Trim17-201ENSMUST00000047697 NgefQ8CHT1 710 aa12.75□□□□□ -0.37
Trim17-201ENSMUST00000047697 Q9D2X8 372 aa12.75□□□□□ -0.37
Trim17-201ENSMUST00000047697 Ankrd50F7BE84 1390 aa12.75□□□□□ -0.37
Trim17-201ENSMUST00000047697 Lmod3E9QA62 571 aa12.75□□□□□ -0.37
Trim17-201ENSMUST00000047697 Q4VA45 678 aa12.75□□□□□ -0.37
Trim17-201ENSMUST00000047697 IbspQ61711 324 aa12.74□□□□□ -0.37
Trim17-201ENSMUST00000047697 Isy1Q69ZQ2 285 aaKnown RBP12.74□□□□□ -0.37
Trim17-201ENSMUST00000047697 Rnf214Q8BFU3 668 aaKnown RBP12.74□□□□□ -0.37
Trim17-201ENSMUST00000047697 Cabp2Q9JLK4 216 aa12.74□□□□□ -0.37
Trim17-201ENSMUST00000047697 InsrP15208 1372 aa12.74□□□□□ -0.37
Trim17-201ENSMUST00000047697 1700010I14RikQ7TPG0 532 aa12.74□□□□□ -0.37
Trim17-201ENSMUST00000047697 Kif2cQ922S8 721 aa12.74□□□□□ -0.37
Trim17-201ENSMUST00000047697 Cdk19Q8BWD8 501 aa12.74□□□□□ -0.37
Trim17-201ENSMUST00000047697 Rnf17Q99MV7 1640 aa12.73□□□□□ -0.37
Trim17-201ENSMUST00000047697 Wwc1Q5SXA9 1104 aa12.73□□□□□ -0.37
Trim17-201ENSMUST00000047697 Smarca5Q91ZW3 1051 aaKnown RBP12.73□□□□□ -0.37
Trim17-201ENSMUST00000047697 Mcm10Q0VBD2 885 aa12.72□□□□□ -0.37
Trim17-201ENSMUST00000047697 PogkQ80TC5 607 aa12.72□□□□□ -0.37
Trim17-201ENSMUST00000047697 Bag4Q8CI61 457 aa12.72□□□□□ -0.37
Trim17-201ENSMUST00000047697 Slc52a2Q9D8F3 450 aa12.72□□□□□ -0.37
Trim17-201ENSMUST00000047697 Znf608Q56A10 1511 aa12.72□□□□□ -0.37
Trim17-201ENSMUST00000047697 Ppip5k2Q6ZQB6 1129 aa12.72□□□□□ -0.37
Trim17-201ENSMUST00000047697 Ush1cQ9ES64 910 aa12.72□□□□□ -0.37
Trim17-201ENSMUST00000047697 Bloc1s4Q8VED2 215 aa12.72□□□□□ -0.37
Trim17-201ENSMUST00000047697 Itsn2Q9Z0R6 1659 aa12.71□□□□□ -0.37
Trim17-201ENSMUST00000047697 FanciQ8K368 1330 aa12.71□□□□□ -0.37
Trim17-201ENSMUST00000047697 Zkscan1Q8BGS3 561 aaKnown RBP12.71□□□□□ -0.37
Trim17-201ENSMUST00000047697 Cdc42bpbQ7TT50 1713 aa12.71□□□□□ -0.37
Trim17-201ENSMUST00000047697 Phactr2B1AVP0 632 aa12.71□□□□□ -0.38
Trim17-201ENSMUST00000047697 Ankrd44B2RXR6 993 aa12.71□□□□□ -0.38
Trim17-201ENSMUST00000047697 Zcchc11B2RX14 1644 aaKnown RBP12.71□□□□□ -0.38
Trim17-201ENSMUST00000047697 Ttc21aQ8C0S4 1314 aa12.71□□□□□ -0.38
Trim17-201ENSMUST00000047697 Pdia4P08003 638 aaKnown RBP12.7□□□□□ -0.38
Trim17-201ENSMUST00000047697 KdrP35918 1367 aa12.7□□□□□ -0.38
Trim17-201ENSMUST00000047697 Rasa1E9PYG6 1038 aa12.7□□□□□ -0.38
Trim17-201ENSMUST00000047697 Klhdc4Q921I2 584 aa12.7□□□□□ -0.38
Trim17-201ENSMUST00000047697 NinlQ6ZQ12 1394 aa12.7□□□□□ -0.38
Trim17-201ENSMUST00000047697 AU022751B1B0V2 589 aa12.7□□□□□ -0.38
Trim17-201ENSMUST00000047697 Trim27Q62158 513 aa12.7□□□□□ -0.38
Trim17-201ENSMUST00000047697 Becn1O88597 448 aa12.69□□□□□ -0.38
Trim17-201ENSMUST00000047697 PalldQ9ET54 1408 aa12.69□□□□□ -0.38
Trim17-201ENSMUST00000047697 Nol12Q8BG17 217 aa12.69□□□□□ -0.38
Trim17-201ENSMUST00000047697 Stk31Q99MW1 1018 aa12.69□□□□□ -0.38
Trim17-201ENSMUST00000047697 FanclQ9CR14 375 aa12.69□□□□□ -0.38
Trim17-201ENSMUST00000047697 ShprhQ7TPQ3 1674 aa12.69□□□□□ -0.38
Trim17-201ENSMUST00000047697 Vamp4O70480 141 aa12.69□□□□□ -0.38
Trim17-201ENSMUST00000047697 Casc1Q6TDU8 730 aa12.69□□□□□ -0.38
Trim17-201ENSMUST00000047697 Pcmtd1P59913 357 aa12.68□□□□□ -0.38
Trim17-201ENSMUST00000047697 Nsd3Q6P2L6 1439 aa12.68□□□□□ -0.38
Trim17-201ENSMUST00000047697 Lrrc7Q80TE7 1490 aa12.68□□□□□ -0.38
Trim17-201ENSMUST00000047697 Robo2Q7TPD3 1470 aa12.68□□□□□ -0.38
Trim17-201ENSMUST00000047697 Cfap65Q3V0B4 1847 aa12.68□□□□□ -0.38
Trim17-201ENSMUST00000047697 Abcc3B2RX12 1523 aa12.68□□□□□ -0.38
Trim17-201ENSMUST00000047697 LifrP42703 1092 aa12.68□□□□□ -0.38
Trim17-201ENSMUST00000047697 Fchsd2Q3USJ8 740 aa12.67□□□□□ -0.38
Trim17-201ENSMUST00000047697 PtmsQ9D0J8 101 aaKnown RBP12.67□□□□□ -0.38
Trim17-201ENSMUST00000047697 Abcc1O35379 1528 aa12.67□□□□□ -0.38
Trim17-201ENSMUST00000047697 Igf1rQ60751 1373 aa12.67□□□□□ -0.38
Trim17-201ENSMUST00000047697 Syce3B5KM66 88 aa12.66□□□□□ -0.38
Trim17-201ENSMUST00000047697 MccE9PWI3 1003 aa12.66□□□□□ -0.38
Trim17-201ENSMUST00000047697 Tnnt1O88346 262 aa12.66□□□□□ -0.38
Trim17-201ENSMUST00000047697 Cep152A2AUM9 1736 aaKnown RBP12.66□□□□□ -0.38
Trim17-201ENSMUST00000047697 MpripP97434 1024 aa12.66□□□□□ -0.38
Trim17-201ENSMUST00000047697 Rab11fip3Q8CHD8 1047 aa12.66□□□□□ -0.38
Trim17-201ENSMUST00000047697 Gcc1Q9D4H2 778 aa12.66□□□□□ -0.38
Trim17-201ENSMUST00000047697 Cyp46a1Q9WVK8 500 aa12.66□□□□□ -0.38
Retrieved 100 of 22,080 RNA–protein pairs in 16.2 ms