RNA–Protein interactions for RNA: ENSMUST00000041643.3

Pcif1-201, Transcript of Phosphorylated CTD-interacting factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcif1, Length 5,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcif1-201ENSMUST00000041643 Atl3Q91YH5 541 aa14.58□□□□□ -0.07
Pcif1-201ENSMUST00000041643 Naip6Q9JIB6 1403 aa14.58□□□□□ -0.08
Pcif1-201ENSMUST00000041643 Gnl3lQ6PGG6 577 aaKnown RBP14.58□□□□□ -0.08
Pcif1-201ENSMUST00000041643 TnikP83510 1323 aa14.57□□□□□ -0.08
Pcif1-201ENSMUST00000041643 Atp6v1dP57746 247 aa14.57□□□□□ -0.08
Pcif1-201ENSMUST00000041643 Ak7Q9D2H2 614 aa14.57□□□□□ -0.08
Pcif1-201ENSMUST00000041643 PtprgQ05909 1442 aa14.57□□□□□ -0.08
Pcif1-201ENSMUST00000041643 Tmem94Q7TSH8 1360 aa14.57□□□□□ -0.08
Pcif1-201ENSMUST00000041643 R3hcc1Q8BSI6 488 aa14.56□□□□□ -0.08
Pcif1-201ENSMUST00000041643 Btbd11Q6GQW0 1109 aa14.56□□□□□ -0.08
Pcif1-201ENSMUST00000041643 Zranb1Q7M760 708 aa14.56□□□□□ -0.08
Pcif1-201ENSMUST00000041643 SphkapQ6NSW3 1687 aa14.56□□□□□ -0.08
Pcif1-201ENSMUST00000041643 NpatQ8BMA5 1420 aa14.56□□□□□ -0.08
Pcif1-201ENSMUST00000041643 Cyp46a1Q9WVK8 500 aa14.55□□□□□ -0.08
Pcif1-201ENSMUST00000041643 Mug2P28666 1451 aa14.55□□□□□ -0.08
Pcif1-201ENSMUST00000041643 Eva1cP58659 440 aa14.55□□□□□ -0.08
Pcif1-201ENSMUST00000041643 Ddx11Q6AXC6 880 aa14.55□□□□□ -0.08
Pcif1-201ENSMUST00000041643 Cdk13Q69ZA1 1511 aaKnown RBP14.55□□□□□ -0.08
Pcif1-201ENSMUST00000041643 Dnai2A2AC93 623 aa14.55□□□□□ -0.08
Pcif1-201ENSMUST00000041643 PsapQ61207 557 aaKnown RBP14.55□□□□□ -0.08
Pcif1-201ENSMUST00000041643 Fam50bQ9WTJ8 334 aa14.55□□□□□ -0.08
Pcif1-201ENSMUST00000041643 Farp2Q91VS8 1065 aa14.54□□□□□ -0.08
Pcif1-201ENSMUST00000041643 Cetn4Q8K4K1 168 aa14.54□□□□□ -0.08
Pcif1-201ENSMUST00000041643 Prrc2bQ7TPM1 1486 aaKnown RBP14.54□□□□□ -0.08
Pcif1-201ENSMUST00000041643 Acsbg1Q99PU5 721 aa14.54□□□□□ -0.08
Pcif1-201ENSMUST00000041643 Erc2Q6PH08 957 aa14.54□□□□□ -0.08
Pcif1-201ENSMUST00000041643 Slc12a5Q91V14 1138 aa14.54□□□□□ -0.08
Pcif1-201ENSMUST00000041643 Ccdc47Q9D024 483 aaKnown RBP14.54□□□□□ -0.08
Pcif1-201ENSMUST00000041643 Fam208aQ69ZR9 1610 aaKnown RBP14.54□□□□□ -0.08
Pcif1-201ENSMUST00000041643 Ccne1Q61457 408 aa14.53□□□□□ -0.08
Pcif1-201ENSMUST00000041643 Q9D2X8 372 aa14.53□□□□□ -0.08
Pcif1-201ENSMUST00000041643 Gprasp1Q5U4C1 1347 aa14.53□□□□□ -0.08
Pcif1-201ENSMUST00000041643 NinlQ6ZQ12 1394 aa14.53□□□□□ -0.08
Pcif1-201ENSMUST00000041643 Gnai2P08752 355 aaKnown RBP14.53□□□□□ -0.08
Pcif1-201ENSMUST00000041643 Naip7Q9JIB3 1402 aa14.53□□□□□ -0.08
Pcif1-201ENSMUST00000041643 Asxl2Q8BZ32 1370 aa14.52□□□□□ -0.09
Pcif1-201ENSMUST00000041643 SkilQ60665 675 aa14.52□□□□□ -0.09
Pcif1-201ENSMUST00000041643 KarsQ99MN1 595 aaKnown RBP14.52□□□□□ -0.09
Pcif1-201ENSMUST00000041643 Frmpd2A0A140LI67 1392 aa14.52□□□□□ -0.09
Pcif1-201ENSMUST00000041643 Zeb2Q9R0G7 1215 aa14.51□□□□□ -0.09
Pcif1-201ENSMUST00000041643 Atxn3Q9CVD2 355 aa14.51□□□□□ -0.09
Pcif1-201ENSMUST00000041643 TimelessQ9R1X4 1197 aa14.51□□□□□ -0.09
Pcif1-201ENSMUST00000041643 Dhx16G3X8X0 1044 aaKnown RBP14.51□□□□□ -0.09
Pcif1-201ENSMUST00000041643 Znf608Q56A10 1511 aa14.5□□□□□ -0.09
Pcif1-201ENSMUST00000041643 InsrP15208 1372 aa14.5□□□□□ -0.09
Pcif1-201ENSMUST00000041643 Filip1lQ6P6L0 1131 aa14.49□□□□□ -0.09
Pcif1-201ENSMUST00000041643 CrebrfQ8CDG5 640 aaKnown RBP14.49□□□□□ -0.09
Pcif1-201ENSMUST00000041643 Flad1Q8R123 492 aa14.49□□□□□ -0.09
Pcif1-201ENSMUST00000041643 ApobrQ8VBT6 942 aa14.49□□□□□ -0.09
Pcif1-201ENSMUST00000041643 Lrrc7Q80TE7 1490 aa14.49□□□□□ -0.09
Pcif1-201ENSMUST00000041643 Nol11Q8BJW5 723 aaKnown RBP14.49□□□□□ -0.09
Pcif1-201ENSMUST00000041643 Nek4Q9Z1J2 792 aa14.49□□□□□ -0.09
Pcif1-201ENSMUST00000041643 Exoc6bA6H5Z3 810 aa14.49□□□□□ -0.09
Pcif1-201ENSMUST00000041643 Stk3Q9JI10 497 aa14.49□□□□□ -0.09
Pcif1-201ENSMUST00000041643 PalldQ9ET54 1408 aa14.49□□□□□ -0.09
Pcif1-201ENSMUST00000041643 Eif3bQ8JZQ9 803 aaKnown RBP14.49□□□□□ -0.09
Pcif1-201ENSMUST00000041643 Rsph3aQ3UFY4 516 aa14.48□□□□□ -0.09
Pcif1-201ENSMUST00000041643 PhaxQ9JJT9 385 aaKnown RBP14.48□□□□□ -0.09
Pcif1-201ENSMUST00000041643 Cpsf1Q9EPU4 1441 aaKnown RBP14.48□□□□□ -0.09
Pcif1-201ENSMUST00000041643 Ppp2r3aB2RXC8 1150 aa14.48□□□□□ -0.09
Pcif1-201ENSMUST00000041643 Nphp1Q9QY53 687 aa14.48□□□□□ -0.09
Pcif1-201ENSMUST00000041643 Ttll13A4Q9F6 804 aa14.48□□□□□ -0.09
Pcif1-201ENSMUST00000041643 Stard3nlQ9DCI3 235 aa14.48□□□□□ -0.09
Pcif1-201ENSMUST00000041643 KinQ8K339 391 aa14.47□□□□□ -0.09
Pcif1-201ENSMUST00000041643 Rfx1P48377 963 aa14.47□□□□□ -0.09
Pcif1-201ENSMUST00000041643 Mcm2P97310 904 aa14.47□□□□□ -0.09
Pcif1-201ENSMUST00000041643 Mcm10Q0VBD2 885 aa14.47□□□□□ -0.09
Pcif1-201ENSMUST00000041643 Sos1Q62245 1319 aa14.47□□□□□ -0.09
Pcif1-201ENSMUST00000041643 St18Q80TY4 1045 aa14.47□□□□□ -0.09
Pcif1-201ENSMUST00000041643 Tomm22Q9CPQ3 142 aa14.47□□□□□ -0.09
Pcif1-201ENSMUST00000041643 Cep170Q6A065 1588 aa14.46□□□□□ -0.09
Pcif1-201ENSMUST00000041643 Synj2Q9D2G5 1434 aa14.46□□□□□ -0.09
Pcif1-201ENSMUST00000041643 Kcnh8P59111 1102 aa14.46□□□□□ -0.09
Pcif1-201ENSMUST00000041643 MvpQ9EQK5 861 aa14.46□□□□□ -0.09
Pcif1-201ENSMUST00000041643 Phactr2B1AVP0 632 aa14.46□□□□□ -0.09
Pcif1-201ENSMUST00000041643 Rabep1O35551 862 aa14.46□□□□□ -0.09
Pcif1-201ENSMUST00000041643 Cfap65Q3V0B4 1847 aa14.46□□□□□ -0.09
Pcif1-201ENSMUST00000041643 Eif3aP23116 1344 aaKnown RBP14.46□□□□□ -0.09
Pcif1-201ENSMUST00000041643 Ccdc183A2AJB1 534 aa14.46□□□□□ -0.09
Pcif1-201ENSMUST00000041643 Rnf20Q5DTM8 973 aa14.46□□□□□ -0.09
Pcif1-201ENSMUST00000041643 Casq1O09165 405 aa14.46□□□□□ -0.1
Pcif1-201ENSMUST00000041643 Zmym4A2A791 1549 aaKnown RBP14.45□□□□□ -0.1
Pcif1-201ENSMUST00000041643 Tpm3-rs7D3Z2H9 248 aa14.45□□□□□ -0.1
Pcif1-201ENSMUST00000041643 Sugp2Q8CH09 1067 aa14.45□□□□□ -0.1
Pcif1-201ENSMUST00000041643 Map3k13Q1HKZ5 959 aa14.45□□□□□ -0.1
Pcif1-201ENSMUST00000041643 Cwc27Q3TKY6 469 aa14.45□□□□□ -0.1
Pcif1-201ENSMUST00000041643 Maco1Q7TQE6 664 aaKnown RBP14.45□□□□□ -0.1
Pcif1-201ENSMUST00000041643 Gimap5Q8BWF2 308 aa14.45□□□□□ -0.1
Pcif1-201ENSMUST00000041643 Erich6bQ9D4S6 220 aa14.45□□□□□ -0.1
Pcif1-201ENSMUST00000041643 Dzip1Q8BMD2 852 aa14.45□□□□□ -0.1
Pcif1-201ENSMUST00000041643 Dnttip2Q8R2M2 758 aaKnown RBP14.45□□□□□ -0.1
Pcif1-201ENSMUST00000041643 Rbm5Q91YE7 815 aaKnown RBP14.44□□□□□ -0.1
Pcif1-201ENSMUST00000041643 Elp1Q7TT37 1333 aaKnown RBP14.44□□□□□ -0.1
Pcif1-201ENSMUST00000041643 Hfm1D3Z4R1 1434 aa14.44□□□□□ -0.1
Pcif1-201ENSMUST00000041643 Efcab6Q6P1E8 1516 aa14.44□□□□□ -0.1
Pcif1-201ENSMUST00000041643 Zkscan2G3X952 960 aa14.44□□□□□ -0.1
Pcif1-201ENSMUST00000041643 CrcpO35427 148 aa14.44□□□□□ -0.1
Pcif1-201ENSMUST00000041643 Noc3lQ8VI84 807 aaKnown RBP14.44□□□□□ -0.1
Pcif1-201ENSMUST00000041643 L3mbtl2P59178 703 aa14.44□□□□□ -0.1
Pcif1-201ENSMUST00000041643 Dixdc1Q80Y83 711 aa14.44□□□□□ -0.1
Retrieved 100 of 22,080 RNA–protein pairs in 90.2 ms