RNA–Protein interactions for RNA: ENSMUST00000040111.9

Ttc28-201, Transcript of Tetratricopeptide repeat protein 28, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Ttc28, Length 10,780 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc28-201ENSMUST00000040111 Paf1Q8K2T8 535 aa10.59□□□□□ -0.71
Ttc28-201ENSMUST00000040111 Taf3Q5HZG4 932 aa10.59□□□□□ -0.71
Ttc28-201ENSMUST00000040111 EprsQ8CGC7 1512 aaKnown RBP10.58□□□□□ -0.72
Ttc28-201ENSMUST00000040111 Fmnl2A2APV2 1086 aa10.58□□□□□ -0.72
Ttc28-201ENSMUST00000040111 Pnmal2G3X9N3 661 aa10.58□□□□□ -0.72
Ttc28-201ENSMUST00000040111 Washc4Q3UMB9 1173 aa10.58□□□□□ -0.72
Ttc28-201ENSMUST00000040111 Utp3Q9JI13 469 aaKnown RBP10.58□□□□□ -0.72
Ttc28-201ENSMUST00000040111 Tpm1P58771 284 aa10.58□□□□□ -0.72
Ttc28-201ENSMUST00000040111 Ccdc34Q3UI66 367 aa10.58□□□□□ -0.72
Ttc28-201ENSMUST00000040111 Ccdc141E9Q8Q6 1531 aa10.58□□□□□ -0.72
Ttc28-201ENSMUST00000040111 Ddx11Q6AXC6 880 aa10.58□□□□□ -0.72
Ttc28-201ENSMUST00000040111 Zbtb3Q91X45 518 aa10.58□□□□□ -0.72
Ttc28-201ENSMUST00000040111 HypkQ9CR41 129 aa10.58□□□□□ -0.72
Ttc28-201ENSMUST00000040111 Mapk8ip1Q9WVI9 707 aa10.58□□□□□ -0.72
Ttc28-201ENSMUST00000040111 Me1P06801 572 aa10.58□□□□□ -0.72
Ttc28-201ENSMUST00000040111 Zbtb21E9Q444 1094 aa10.58□□□□□ -0.72
Ttc28-201ENSMUST00000040111 Prdm16A2A935 1275 aa10.58□□□□□ -0.72
Ttc28-201ENSMUST00000040111 SfswapQ3USH5 945 aaKnown RBP10.58□□□□□ -0.72
Ttc28-201ENSMUST00000040111 Pdcl3Q8BVF2 240 aa10.58□□□□□ -0.72
Ttc28-201ENSMUST00000040111 Jarid2Q62315 1234 aa10.57□□□□□ -0.72
Ttc28-201ENSMUST00000040111 IkQ9Z1M8 557 aaKnown RBP10.57□□□□□ -0.72
Ttc28-201ENSMUST00000040111 TnikP83510 1323 aa10.57□□□□□ -0.72
Ttc28-201ENSMUST00000040111 Ccne1Q61457 408 aa10.57□□□□□ -0.72
Ttc28-201ENSMUST00000040111 Ttll13A4Q9F6 804 aa10.57□□□□□ -0.72
Ttc28-201ENSMUST00000040111 Agtpbp1Q641K1 1218 aa10.57□□□□□ -0.72
Ttc28-201ENSMUST00000040111 Filip1lQ6P6L0 1131 aa10.57□□□□□ -0.72
Ttc28-201ENSMUST00000040111 Gsdma3Q5Y4Y6 464 aa10.56□□□□□ -0.72
Ttc28-201ENSMUST00000040111 Ttc21bQ0HA38 1315 aa10.56□□□□□ -0.72
Ttc28-201ENSMUST00000040111 Cplx1P63040 134 aa10.56□□□□□ -0.72
Ttc28-201ENSMUST00000040111 Znhit6Q3UFB2 460 aaKnown RBP10.56□□□□□ -0.72
Ttc28-201ENSMUST00000040111 Q3UJC8 639 aa10.56□□□□□ -0.72
Ttc28-201ENSMUST00000040111 Prm3Q62100 101 aa10.56□□□□□ -0.72
Ttc28-201ENSMUST00000040111 NexnQ7TPW1 607 aa10.56□□□□□ -0.72
Ttc28-201ENSMUST00000040111 Fam13bQ8K2H3 851 aa10.56□□□□□ -0.72
Ttc28-201ENSMUST00000040111 Smc3Q9CW03 1217 aaKnown RBP10.56□□□□□ -0.72
Ttc28-201ENSMUST00000040111 CalrP14211 416 aaKnown RBP10.56□□□□□ -0.72
Ttc28-201ENSMUST00000040111 TmpoQ61033 693 aaKnown RBP10.56□□□□□ -0.72
Ttc28-201ENSMUST00000040111 Nap1l3Q794H2 544 aa10.56□□□□□ -0.72
Ttc28-201ENSMUST00000040111 Cgnl1Q6AW69 1298 aa10.56□□□□□ -0.72
Ttc28-201ENSMUST00000040111 Rec8Q8C5S7 591 aa10.56□□□□□ -0.72
Ttc28-201ENSMUST00000040111 CalcaP70160 136 aa10.55□□□□□ -0.72
Ttc28-201ENSMUST00000040111 Ddx17Q501J6 650 aaKnown RBP10.55□□□□□ -0.72
Ttc28-201ENSMUST00000040111 Rbm19Q8R3C6 952 aaKnown RBP10.55□□□□□ -0.72
Ttc28-201ENSMUST00000040111 St18Q80TY4 1045 aa10.55□□□□□ -0.72
Ttc28-201ENSMUST00000040111 Rsph4aQ8BYM7 716 aa10.55□□□□□ -0.72
Ttc28-201ENSMUST00000040111 Btbd11Q6GQW0 1109 aa10.55□□□□□ -0.72
Ttc28-201ENSMUST00000040111 Casq1O09165 405 aa10.55□□□□□ -0.72
Ttc28-201ENSMUST00000040111 Znf710Q3U288 666 aa10.55□□□□□ -0.72
Ttc28-201ENSMUST00000040111 Maco1Q7TQE6 664 aaKnown RBP10.55□□□□□ -0.72
Ttc28-201ENSMUST00000040111 Crybg2B7ZCC2 1516 aa10.55□□□□□ -0.72
Ttc28-201ENSMUST00000040111 Ncapd3Q6ZQK0 1506 aa10.55□□□□□ -0.72
Ttc28-201ENSMUST00000040111 PnisrA2AJT4 805 aaKnown RBP10.55□□□□□ -0.72
Ttc28-201ENSMUST00000040111 Arhgef5E9Q7D5 1581 aa10.54□□□□□ -0.72
Ttc28-201ENSMUST00000040111 Tmem94Q7TSH8 1360 aa10.54□□□□□ -0.72
Ttc28-201ENSMUST00000040111 Cpa2Q504N0 417 aa10.54□□□□□ -0.72
Ttc28-201ENSMUST00000040111 PrxO55103 1391 aa10.54□□□□□ -0.72
Ttc28-201ENSMUST00000040111 Slc12a5Q91V14 1138 aa10.54□□□□□ -0.72
Ttc28-201ENSMUST00000040111 Myom3A2ABU4 1439 aa10.54□□□□□ -0.72
Ttc28-201ENSMUST00000040111 FanciQ8K368 1330 aa10.54□□□□□ -0.72
Ttc28-201ENSMUST00000040111 Rbm26Q6NZN0 1012 aaKnown RBP10.54□□□□□ -0.72
Ttc28-201ENSMUST00000040111 Tshz3Q8CGV9 1081 aa10.53□□□□□ -0.72
Ttc28-201ENSMUST00000040111 Ccdc183A2AJB1 534 aa10.53□□□□□ -0.72
Ttc28-201ENSMUST00000040111 Nphp1Q9QY53 687 aa10.53□□□□□ -0.72
Ttc28-201ENSMUST00000040111 KinQ8K339 391 aa10.53□□□□□ -0.72
Ttc28-201ENSMUST00000040111 Glipr1l2Q9CQ35 332 aa10.53□□□□□ -0.72
Ttc28-201ENSMUST00000040111 Ccdc47Q9D024 483 aaKnown RBP10.53□□□□□ -0.72
Ttc28-201ENSMUST00000040111 Tfip11Q9ERA6 838 aaKnown RBP10.53□□□□□ -0.72
Ttc28-201ENSMUST00000040111 Srgap3Q812A2 1099 aa10.53□□□□□ -0.72
Ttc28-201ENSMUST00000040111 Anp32eP97822 260 aaKnown RBP10.53□□□□□ -0.72
Ttc28-201ENSMUST00000040111 A2mQ6GQT1 1474 aa10.53□□□□□ -0.72
Ttc28-201ENSMUST00000040111 Themis2Q91YX0 663 aa10.53□□□□□ -0.72
Ttc28-201ENSMUST00000040111 Vps8Q0P5W1 1427 aa10.53□□□□□ -0.72
Ttc28-201ENSMUST00000040111 Tpm2P58774 284 aa10.53□□□□□ -0.72
Ttc28-201ENSMUST00000040111 Jakmip1Q8BVL9 626 aa10.52□□□□□ -0.72
Ttc28-201ENSMUST00000040111 Ccdc43Q9CR29 222 aaKnown RBP10.52□□□□□ -0.72
Ttc28-201ENSMUST00000040111 Rbm28Q8CGC6 750 aaKnown RBP10.52□□□□□ -0.73
Ttc28-201ENSMUST00000040111 Gripap1Q8VD04 806 aa10.52□□□□□ -0.73
Ttc28-201ENSMUST00000040111 Sh3bgrQ9WUZ7 214 aa10.52□□□□□ -0.73
Ttc28-201ENSMUST00000040111 Gabpb2P81069 414 aa10.52□□□□□ -0.73
Ttc28-201ENSMUST00000040111 Cwc15Q9JHS9 229 aaKnown RBP10.52□□□□□ -0.73
Ttc28-201ENSMUST00000040111 Cavin4A2AMM0 362 aa10.52□□□□□ -0.73
Ttc28-201ENSMUST00000040111 Sel1lQ9Z2G6 790 aa10.52□□□□□ -0.73
Ttc28-201ENSMUST00000040111 NexmifQ5DTT1 1515 aa10.52□□□□□ -0.73
Ttc28-201ENSMUST00000040111 Ptcd1Q8C2E4 695 aaKnown RBP10.51□□□□□ -0.73
Ttc28-201ENSMUST00000040111 Rsph6aQ8CDR2 708 aa10.51□□□□□ -0.73
Ttc28-201ENSMUST00000040111 Washc2Q6PGL7 1334 aa10.51□□□□□ -0.73
Ttc28-201ENSMUST00000040111 NgdnQ9DB96 315 aaKnown RBP10.51□□□□□ -0.73
Ttc28-201ENSMUST00000040111 Tbc1d7Q9D0K0 293 aa10.51□□□□□ -0.73
Ttc28-201ENSMUST00000040111 Ercc3P49135 783 aa10.51□□□□□ -0.73
Ttc28-201ENSMUST00000040111 Gas2l2Q5SSG4 860 aa10.51□□□□□ -0.73
Ttc28-201ENSMUST00000040111 Kif4P33174 1231 aa10.51□□□□□ -0.73
Ttc28-201ENSMUST00000040111 Tnpo1Q8BFY9 898 aaKnown RBP10.51□□□□□ -0.73
Ttc28-201ENSMUST00000040111 Dhx8A2A4P0 1244 aaKnown RBP10.5□□□□□ -0.73
Ttc28-201ENSMUST00000040111 Ipo7Q9EPL8 1038 aaKnown RBP10.5□□□□□ -0.73
Ttc28-201ENSMUST00000040111 IncenpQ9WU62 880 aa10.5□□□□□ -0.73
Ttc28-201ENSMUST00000040111 L3mbtl2P59178 703 aa10.5□□□□□ -0.73
Ttc28-201ENSMUST00000040111 Cux1P53564 1515 aa10.5□□□□□ -0.73
Ttc28-201ENSMUST00000040111 Znf771Q8BJ90 317 aa10.5□□□□□ -0.73
Ttc28-201ENSMUST00000040111 Gnai2P08752 355 aaKnown RBP10.5□□□□□ -0.73
Ttc28-201ENSMUST00000040111 Rufy1Q8BIJ7 712 aa10.49□□□□□ -0.73
Retrieved 100 of 22,080 RNA–protein pairs in 9.5 ms